Gcaud7398.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7398.t1
Unique NameGcaud7398.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length180
Homology
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BLAST of Gcaud7398.t1 vs. uniprot
Match: A0A2V3II07_9FLOR (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II07_9FLOR)

HSP 1 Score: 249 bits (637), Expect = 5.530e-81
Identity = 119/176 (67.61%), Postives = 147/176 (83.52%), Query Frame = 0 
Query:    4 DRELARLMVTLFEGTQLRMHVLFASGALVKEAHRVWGGLKDVSLGEWRGIRGFGSGMAAGADVLVFVGDDVRLVRAAAEVGRLLGMDRLVIVLNARAPQLLDDQFEHVYHMRSEALWKGALLFRKYPHDWSVCRVTRFGSYASVLQSEQRPSDEQVKAALEATDANAVEDVLSLFR 179
            DRE+ARLM+ LFEG  L+MHV F+  A VKEA RVWG + DV+LGEWRGIRGFG+GMA GADVLVFVGDD RLVRAA+EVG+ LGMD+LVI++NARAP+ +D++F  VYH  + A WKG ++FRK+PH+W VCRVTRFGSY++VLQ+E+RPS E + AALE  D NA+ DV+SLFR
Sbjct:   89 DREVARLMIALFEGKGLKMHVFFSGKAQVKEADRVWGQMNDVTLGEWRGIRGFGAGMAGGADVLVFVGDDTRLVRAASEVGQSLGMDKLVIMVNARAPEQMDERFIEVYHFDTTAKWKGGVVFRKHPHEWVVCRVTRFGSYSTVLQTEERPSGEDIIAALEGADTNAMIDVMSLFR 264
The following BLAST results are available for this feature:
BLAST of Gcaud7398.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3II07_9FLOR5.530e-8167.61DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 7..160
e-value: 1.8E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2573_length_5268_cov_3.677999contigNODE_2573_length_5268_cov_3.677999:4302..4841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7398.t1Gcaud7398.t1Gracilaria caudata M_176_S67 malemRNANODE_2573_length_5268_cov_3.677999 4302..4841 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7398.t1 ID=Gcaud7398.t1|Name=Gcaud7398.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=180bp
MGCDRELARLMVTLFEGTQLRMHVLFASGALVKEAHRVWGGLKDVSLGEW
RGIRGFGSGMAAGADVLVFVGDDVRLVRAAAEVGRLLGMDRLVIVLNARA
PQLLDDQFEHVYHMRSEALWKGALLFRKYPHDWSVCRVTRFGSYASVLQS
EQRPSDEQVKAALEATDANAVEDVLSLFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995