Gcaud7394.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7394.t1
Unique NameGcaud7394.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length347
Homology
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A2V3INK9_9FLOR (RNA polymerase II-associated protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK9_9FLOR)

HSP 1 Score: 455 bits (1171), Expect = 4.480e-158
Identity = 234/348 (67.24%), Postives = 294/348 (84.48%), Query Frame = 0
Query:    1 MESGTEEQLLQLSLTGSLPPSLQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIEDNATAKAELEMLEAKYGVRPPTPRSRS--RHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPLTEIQDETEILQLSNDTMQNLVLKWSTSEPRNAAEFERSWKSLKGDEFAQSKYLLDVVGPERIERGLLGEILTPQLLQRVVAVLSTAIARYRSYSTSAARIMIAFSRVSRFDMILMFLSFAERQEIRGLIDSLEKNEVTPTLIRSLQDSYL 346
            MESGTEEQLLQLSLTG LPPSLQKSFDEEKEKGN+AYR GRYH+A+QHYT AESINP+S IPPANRAMV+LKLKD+ERAKAEA+IAHELH S+PEE RN+RL AKILLRRATANKEL+L+ALAAEDYQAVL +EDNATAKAEL +L+ +YG+RPP+PR RS  R+S +S+ +I +VSE+   +NG+A  T     P +++ QD+TE++Q+S  TMQ+L++KW T+EPRNA +FERSWKSL+ DE AQ+KYLL+VVG +RIE+GLLGEILT QLL+RV+ VLSTA+ R   Y +S A I++AF++VSRF M+LMFL+ AE+++IR LID+L KN V+  +I +L + YL
Sbjct:    1 MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNNAYREGRYHDAVQHYTAAESINPMSPIPPANRAMVFLKLKDFERAKAEASIAHELHISVPEEDRNKRLSAKILLRRATANKELMLYALAAEDYQAVLGLEDNATAKAELRVLQQRYGIRPPSPRLRSSLRNSASSEPRIEVVSETTARSNGMAVKTTQTSRPAVSKDQDDTELVQISKSTMQDLLVKWGTTEPRNAVDFERSWKSLRDDEMAQAKYLLEVVGAQRIEQGLLGEILTAQLLERVILVLSTALMREPGYKSSIALILLAFTKVSRFSMVLMFLTSAEKRKIRILIDTLRKNNVSEEMIDNLGERYL 348          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A397UFE3_9GLOM (RPAP3_C domain-containing protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UFE3_9GLOM)

HSP 1 Score: 82.8 bits (203), Expect = 4.160e-14
Identity = 93/325 (28.62%), Postives = 149/325 (45.85%), Query Frame = 0
Query:   22 LQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIEDNATA-KAEL-EMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPLTE----IQDETEIL---------QLSNDTMQNLVLKWSTSEPRNAAEFERSWKSLKGDEFAQSKYLLDVVGPERIERGLLGEILTPQLLQRVVAVLSTAIARYRSYSTSAARIMIAFSRVSRFDMILMFLSFAERQEIRGLIDSLEKN 331
            L+K+  +EKE GN+ +++G Y +AI+HY  A  ++P  A+   NRAM YLKLK +  A+ +      LH   P+         K L RR  A +EL     A +D +  L +E N TA K E  ++L+A     P          + S+   R V  S    N I     S+    L E    I+   ++L         Q++N+     V+K +T  PRN  EFER W   + ++  ++ Y      P      LL +   P  L ++V ++      Y S +     I+   SRV RF+++LM L   +++ +  L+ +L K+
Sbjct:   17 LEKAL-QEKETGNNFFKKGDYKKAIEHYGKAIELDPKEAVYVINRAMAYLKLKKWVEAENDCTNGLLLH---PDN-------TKALWRRGIARRELGKLQDAKKDLEDALQLEPNDTAIKNEYGKVLDAIMASSP---------DRTSNEIPRSVDGSV--VNNINRRRLSIEEVDLDENERIIESAKKVLFTDKNNTSQQIANENGNIKVIKINT--PRNIHEFERDWNRYQDND--ENLYQFIKAIPPASYPTLLSDFFEPDYLSKIVFIMKKYFLLYDSVN-DIYNILYYLSRVGRFNLVLMLLEKDDKKVLEDLLSTLYKS 314          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A4Y7J8W2_PAPSO (RPAP3_C domain-containing protein n=5 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J8W2_PAPSO)

HSP 1 Score: 81.3 bits (199), Expect = 2.620e-13
Identity = 92/367 (25.07%), Postives = 162/367 (44.14%), Query Frame = 0
Query:   27 DEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIE-DNATAK-----------------------------------AELEMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPL------TEIQDETEILQLSNDTMQNLVLKWST--SEPRNAAEFERSWKSLKGDEFAQSKYLLDVVGPERIERGLLGEILTPQLLQRVVAVLSTAIARYRSYSTSAARIMIAFSRVSRFDMILMFLSFAERQEIRGLIDSL----EKNEVTPTLIRSLQDSY 345
            + EKE GN+ +++ +++EAI  Y+ + +++P SA+  ANRAM YLK+K +E A+ +   A  L +             K   RRATA KEL     + ED +  L +E DN   K                                    E++    K G +P    S S+ ++ S A   I S+   +  G     ++L + P        + + +T + +L++     +  + +   S P+ A +FE SWK L GD   Q+ +L   + P  + +     +  P L+  +  V +     +   +  A + +   ++VSRFDMI+M LS A++ ++  + + +     K E + TL + LQ  Y
Sbjct:  112 NSEKELGNEYFKQKKFNEAIDCYSRSIALSP-SAVAYANRAMAYLKIKRFEEAENDCTEALNLDDRY----------IKAYSRRATARKELGKLKESIEDSEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGHTKVGGKPSDAGSGSKTARISVASGNISSKPQSY--GPLEGGKTLKVNPQGVQSLDKKREQKTAVQELASRAASRVAAEAAKNLSPPKTAYQFEVSWKGLSGDPALQATFL-KAISPTTLPQLFKNALSAPILIDIIKCVATL----FMEETELAVKFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNKTEYSETLSK-LQSKY 459          
BLAST of Gcaud7394.t1 vs. uniprot
Match: UPI000180C503 (RNA polymerase II-associated protein 3-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=UPI000180C503)

HSP 1 Score: 80.9 bits (198), Expect = 3.660e-13
Identity = 82/346 (23.70%), Postives = 145/346 (41.91%), Query Frame = 0
Query:   30 KEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIE-DNATAKAELEMLE--------------------AKYGVRPPTPRSRSRHSQASDAKIRI--------------------VSESNGHTNGIAPPTRSLPIPPLTEIQDETEILQLSNDTMQNLVLKWST---SEPRNAAEFERSWKSLKGDEFAQSKYLLDVVGPERIERGLLGEILTPQLLQRVVAVLSTAIARYRSYSTSAARIMIAFSRVSRFDMILMFLSFAERQEIRGLIDSLEKN 331
            KE+GN  ++ G+Y +A+  YT +   +P +AI PANRAM YLKL+ +   +A+  ++  L  +            K  LRR +A   +   A A +D+   L +E +N  A  ELE+++                     K GV  P  ++ +R S+    +I +                    +S+    ++     T +  + P  E+            ++Q       T   + P    +F  + +SL+ +  A   YL  +  P      LL + L P +L  ++   S   +    +   A   + A S   RFDMI+MFLS +++ E++ L + +EK+
Sbjct:  130 KEEGNKYFKAGKYEDAVNSYTKSMEYDPTNAIFPANRAMAYLKLQKFIETEADCTLSLSLDPAY----------TKAYLRRGSARVAMGKVASAVKDFNDALKLEPNNNQALKELELIKHEGNKDLKQEDTKPKDMKRIPKKGVVLPVIKAPNRRSKKPLRRIHVTEIPATNTAVDSSKTNSENTISKFEHKSSKTESDTTTTKLTPSKEMSSARSARIPEESSIQTNKATTPTPIPAAPTTCFQFHAALRSLQHNTKATYTYLQQI--PTSTLNKLLKDQLEPSVLMTIIRCFSDCFSNNEDF---AIAFLTAMSSAKRFDMIIMFLSKSDKNEVKSLFELMEKS 460          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.360e-12
Identity = 94/355 (26.48%), Postives = 151/355 (42.54%), Query Frame = 0
Query:   20 PSLQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQ--AVLD-----IEDNATAKAEL------------EMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIP----------PLTEIQDETEILQLSNDTMQNLVLKWSTSEPRNAAEFERSWKSL--KGDEFAQSKYL------LDVVGPERIERGLLGEILTPQLLQRVVAVLSTAIARYRSYST---SAARIMIAFS----RVSRFDMILMFLSFAERQEIRGLIDSLEK 330
            PS +   + EKE GN  Y+RG Y  AI+ YT     NP +A+  +NRAM YLK +++  A+ +  +A +             L  K   RR TA   L    LA  D+Q  A LD     I+    +  EL            E +    G  PP+   RS      D + +    S   ++ +A PT+  P+           P    Q  T+  + S+  +  L  K     P  + EF R WKSL  +GD   QS+ +      L ++ P  + R +    +   +L  +  V   A+    S +T    +   ++AF+    +V RF+M +M LS  E++++  ++  LE+
Sbjct:  143 PSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADP----------LHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPKRTEFVIEVIGESPPSKHLRSEQDSEEDTENKENHGSLQQSSAVAAPTQKSPLHEAKPTDLLPVPQKPGQTGTKTTKKSSVILPKLPKK----APATSYEFGRVWKSLALRGDSDQQSRLISLRADYLRMIDPSAV-RTIFKTAIESDVLCEIFHVFRHAVLSPDSGATVPEGSTTFVLAFASELTKVPRFNMTVMLLSDKEKEDMAWVVSRLEE 482          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A0H5QNV3_9EUKA (RPAP3_C domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QNV3_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 1.050e-11
Identity = 84/315 (26.67%), Postives = 141/315 (44.76%), Query Frame = 0
Query:   20 PSLQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDI--EDNATAKAELEMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPLTEIQDETEILQLSNDTMQNLVLKWSTSE-----PRNAAEFERSWKSLKGDEFAQSKYLLDVVGPERIERGLLGEILTPQLLQRVV---AVLSTAIARYRSYSTSAARIMIAFSRVSRFDMILMFLSFAERQEIRGL 324
            PS     ++ +EKGN+ +R G+YHEA+  Y+    INPL     ANRA  YL LK Y  A+ + +        L  +K N    AK+LLRR TA   L     A  D++ V  +   D+ +AKA  + + A        P+S++  +Q    +  ++ E +G ++       S   P +  + +   I  L  D++  +V   ST       P+ + EFE  ++SL  D      +L+ +              L P+L   V+    ++   ++   S    A  I+   S V RF +++MF +  ++ E+R L
Sbjct:  109 PSATHFAEDIREKGNERFRTGKYHEAVGLYSQCVEINPLDLKALANRAAAYLNLKRYADAENDCSAV------LAADKDN----AKVLLRRGTARTSLKKMLSAIMDFEQVSAVCGPDHPSAKAAQQHI-ATIRSYLSKPKSKT-PAQKFPRRRLVIEEVSGSSDDXXDCDGSEGSPAIATVSNA--ISSLKPDSIAAVVKSSSTVGALPPCPKTSYEFEHVFRSLHRDAGRLFSFLIQI-----------PVALYPRLFCTVIDADVIMDCLLSIDSSNLPGALNILRGLSTVDRFGIMIMFFNDQQKMEVRDL 398          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A397TJX5_9GLOM (RPAP3_C domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TJX5_9GLOM)

HSP 1 Score: 75.5 bits (184), Expect = 1.740e-11
Identity = 71/230 (30.87%), Postives = 107/230 (46.52%), Query Frame = 0
Query:   22 LQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIEDNATAKAELEMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPLTEIQDETE---ILQLSNDTMQNLVL--KWSTSE----PRNAAEFERSWKSLKGDE 242
            L+++F +EKE GN  +++G Y  AI HY  A  ++P  A+   NRAM YLKLK++E A+ +      LH   P          K L RR  A +EL     A +D Q  L +E N  A  E E+ +    +   TP      ++A  A+I          N +  P   L I  +   +DE E   I    N  ++N ++  K +T +    P++  EFER W+  + DE
Sbjct:  168 LEQAF-QEKETGNAFFKKGNYTMAIVHYGKAMELDPKEAVYVINRAMAYLKLKNWENAEIDCTSGLILHPDNP----------KALWRRGIARRELGKLEEAKKDLQDALRLEPNDKAVKE-ELDKVLNAIESATP------NKADTAQI----------NEVPVPRHRLFIEEVDFDEDELETDPIKVYKNKPIENPIIPPKKTTPKKFGVPQSVIEFERDWRIQQSDE 369          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A8H3YG51_9TREE (RPAP3_C domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3YG51_9TREE)

HSP 1 Score: 73.9 bits (180), Expect = 5.010e-11
Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 0
Query:   19 PPSLQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIEDNATAKAELEMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPLTEIQDETEILQLSNDTMQNLVLKWSTSE--PRNAAEFERSWKS 237
            PP+ +KS  E +E GN AY++G++ EAI HYT A  + P    P  NRA  YLK++ ++  + +         SL  + RN     K L RRA+A KE  LF  A  D +A+L IE   TA  E E+ E K  ++    +S +      D  I  ++ES        P  +SLP    T    +  I  +   T +   L    ++   R +AE  ++ +S
Sbjct:    4 PPNPEKSA-EAREAGNAAYKKGKWVEAIGHYTTATVLVPEDPAPLLNRAQAYLKIQKWQDCERDCTKVL----SLAGQGRN----VKALYRRASARKECRLFDQARSDLEALLKIEPMNTAAKE-ELTELKKTIKQSEQKSSAPKKAPQD--ISTLAESTSRK----PSAKSLPARERTSSAVKVPITVVPRFTTRPATLAHGAAQGQTRESAELSKNAES 208          
BLAST of Gcaud7394.t1 vs. uniprot
Match: A0A0P1AW29_PLAHL (Uncharacterized conserved protein, contains LRR repeats n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW29_PLAHL)

HSP 1 Score: 74.3 bits (181), Expect = 5.480e-11
Identity = 89/356 (25.00%), Postives = 158/356 (44.38%), Query Frame = 0
Query:    5 TEEQLLQLSLTGSLPPSL--QKSFDE-EKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIEDNATAKAELEMLEAKYGVRPPTPRSRSRHSQASDAKIRIVSESNG-------------HTNGIAPPTRSLPIPPLTEIQDETEILQLSNDTMQNLVL--KWSTSEPRNAAEFERSWKSL--KGDEFAQSKYL------LDVVGPERI----ERGLLGEILTP--QLLQRVVAVLSTAIARYRSYSTSAARIMIAFSRVSRFDMILMFLSFAERQEIRGLIDSL 328
            T+    Q++ T   P SL   K+ +E E+E GN  Y++G +  AI+ YT     NP + +  +NRAM YLK ++Y  A+ +  +A E   +            K  +RR TA   L    LA  D+Q    + D  + + + ++   +  +R    RS  R    ++  I++V+E +G              T   + P+   P P ++           S+D  ++L+   K+    P  + EF R WK+L  +GDE  + + L      L ++ P  +    + G+  ++L      L+  + +  T  A  +     A  +    ++V RF+MI+M LS  E+ +I  +I+ L
Sbjct:  123 TQNLSCQVAATKKTPASLTASKTREELEREDGNLHYKQGDFVAAIKSYTRCLGYNPQNVVVLSNRAMAYLKNREYTNAEDDCTLALETDLTH----------VKSYMRRGTARNSLGKHRLALLDFQQAATL-DPKSRQIQTQLQSTRELIRMAIKRSPKR----TEFTIKVVNEKSGIEDKKDINSSVQERTEKSSLPSSQSPSPAISASSGSR-----SDDADKHLIFFPKFPKKAPATSYEFARVWKTLALRGDEEQKCRLLHLRADYLRIIDPPALSAVFKSGMESDVLCEIFHTLRHAILIQITNEAVSKESVMFALALASELTKVPRFNMIIMLLSSREKVDILWVINRL 458          
BLAST of Gcaud7394.t1 vs. uniprot
Match: V4A9I6_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A9I6_LOTGI)

HSP 1 Score: 71.6 bits (174), Expect = 9.160e-11
Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 0
Query:   21 SLQKSFDEEKEKGNDAYRRGRYHEAIQHYTIAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNRRLCAKILLRRATANKELLLFALAAEDYQAVLDIED-NATAKAE 142
            +LQ+   EEK KGN+ +++G Y +AI+ YT   + +P +A+ P NRAM  LKL+ Y  A+ +A  A  L            L  K  LRRA A   L  + +A EDY+ +L+++  N  AKAE
Sbjct:  130 ALQQRAIEEKNKGNEHFKKGEYDQAIEWYTKGSNSDPTNALLPGNRAMALLKLERYGAAEVDANQAIILDP----------LYYKAYLRRAAARVGLKKYDMAREDYKKLLNLDPGNKVAKAE 242          
The following BLAST results are available for this feature:
BLAST of Gcaud7394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INK9_9FLOR4.480e-15867.24RNA polymerase II-associated protein 3 n=1 Tax=Gra... [more]
A0A397UFE3_9GLOM4.160e-1428.62RPAP3_C domain-containing protein n=3 Tax=Gigaspor... [more]
A0A4Y7J8W2_PAPSO2.620e-1325.07RPAP3_C domain-containing protein n=5 Tax=Papaver ... [more]
UPI000180C5033.660e-1323.70RNA polymerase II-associated protein 3-like n=1 Ta... [more]
A0A6A4EVA2_9STRA7.360e-1226.48RPAP3_C domain-containing protein n=4 Tax=Phytopht... [more]
A0A0H5QNV3_9EUKA1.050e-1126.67RPAP3_C domain-containing protein (Fragment) n=1 T... [more]
A0A397TJX5_9GLOM1.740e-1130.87RPAP3_C domain-containing protein n=1 Tax=Glomus c... [more]
A0A8H3YG51_9TREE5.010e-1131.22RPAP3_C domain-containing protein n=1 Tax=Naganish... [more]
A0A0P1AW29_PLAHL5.480e-1125.00Uncharacterized conserved protein, contains LRR re... [more]
V4A9I6_LOTGI9.160e-1138.21Uncharacterized protein (Fragment) n=1 Tax=Lottia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 104..137
e-value: 30.0
score: 10.7
coord: 60..93
e-value: 150.0
score: 4.6
coord: 26..59
e-value: 13.0
score: 14.0
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 225..318
e-value: 2.2E-16
score: 60.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 6..156
e-value: 6.1E-21
score: 76.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 26..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..183
NoneNo IPR availablePANTHERPTHR46423RNA POLYMERASE II-ASSOCIATED PROTEIN 3coord: 26..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1743_length_8686_cov_3.971030contigNODE_1743_length_8686_cov_3.971030:3877..4917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7394.t1Gcaud7394.t1Gracilaria caudata M_176_S67 malemRNANODE_1743_length_8686_cov_3.971030 3877..4917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7394.t1 ID=Gcaud7394.t1|Name=Gcaud7394.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=347bp
MESGTEEQLLQLSLTGSLPPSLQKSFDEEKEKGNDAYRRGRYHEAIQHYT
IAESINPLSAIPPANRAMVYLKLKDYERAKAEAAIAHELHESLPEEKRNR
RLCAKILLRRATANKELLLFALAAEDYQAVLDIEDNATAKAELEMLEAKY
GVRPPTPRSRSRHSQASDAKIRIVSESNGHTNGIAPPTRSLPIPPLTEIQ
DETEILQLSNDTMQNLVLKWSTSEPRNAAEFERSWKSLKGDEFAQSKYLL
DVVGPERIERGLLGEILTPQLLQRVVAVLSTAIARYRSYSTSAARIMIAF
SRVSRFDMILMFLSFAERQEIRGLIDSLEKNEVTPTLIRSLQDSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR025986RPAP3-like_C
IPR011990TPR-like_helical_dom_sf