Gcaud7374.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7374.t1
Unique NameGcaud7374.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length142
Homology
[Close]
BLAST of Gcaud7374.t1 vs. uniprot
Match: A0A2V3IZH7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZH7_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 1.560e-30
Identity = 64/101 (63.37%), Postives = 81/101 (80.20%), Query Frame = 0 
Query:   18 MLADEQAMLQLRASRAQRRERRREIRQEDASLADALNAVSVGTEAKQNAPKIGAPLKQDIEMKSMKVARMRIRKRCKKCQQRLNKIRARMARRASTKMNID 118
            M+A+EQA+ + R  RA+     R+IRQEDA+LADALNAVSVG EAK++AP IGAPLK D+EM ++KV R RIRK CKKCQ+RL KIRARMA+RA+  ++ D
Sbjct:    1 MMAEEQAVRRKREQRAKXXXXXRQIRQEDATLADALNAVSVGNEAKKDAPTIGAPLKTDVEMSALKVRRSRIRKPCKKCQERLKKIRARMAKRAAMSIDKD 101
The following BLAST results are available for this feature:
BLAST of Gcaud7374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZH7_9FLOR1.560e-3063.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_85_length_54060_cov_4.846356contigNODE_85_length_54060_cov_4.846356:46986..47474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7374.t1Gcaud7374.t1Gracilaria caudata M_176_S67 malemRNANODE_85_length_54060_cov_4.846356 46986..47474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7374.t1 ID=Gcaud7374.t1|Name=Gcaud7374.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=142bp
MGGRREANQKAKAHLLSMLADEQAMLQLRASRAQRRERRREIRQEDASLA
DALNAVSVGTEAKQNAPKIGAPLKQDIEMKSMKVARMRIRKRCKKCQQRL
NKIRARMARRASTKMNIDSAAPGAALQIALPAGTASKRTSM*
back to top