Gcaud7373.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7373.t1
Unique NameGcaud7373.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length428
Homology
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A2V3IZ83_9FLOR (Target of rapamycin complex subunit LST8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ83_9FLOR)

HSP 1 Score: 523 bits (1346), Expect = 3.190e-182
Identity = 249/390 (63.85%), Postives = 301/390 (77.18%), Query Frame = 0
Query:    1 MNPFLLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSDILN------DRASKKSASVSETEEHSVMPVREFTGRPGWIWDASFIEDSEKFLFTCSSVTQVMLWHIDNLGCSVELTGFPKPTVCLAVRERRHPSSHSN 384
            MN FLLAVGGYDT IRLFD++   P R LQFCDQQ++RLAFSGS PVP  +PLFLAVAGSPSVAVYDV+++ TSPN FAIFQGHLE VTAVGFEP H AFV+SASEDGTLQTW+PKLAA +QS YPSFHS  ++HPM S AS+ FS PAK+VN K +G  V IHDA Y+PP D FFT DFLGR RVW+HRT+SLRSEHIPHPS+RNLQC+DLSHDY T+V+ANFDG VF+Y+T ++L  D++ P  L   + PLT+RASNSYIPR+KLSH+   LVC+T SGA ++++MSD+         R+ + S+  SE E+  +MP RE   RPGWIWD SFIE S+ +LFTCSS  QVMLW ++N+G   EL G  +P  C+A+RER  P S  N
Sbjct:    1 MNRFLLAVGGYDTTIRLFDNIQLPPARTLQFCDQQIIRLAFSGSGPVPVTSPLFLAVAGSPSVAVYDVTSHDTSPNIFAIFQGHLEAVTAVGFEPKHTAFVFSASEDGTLQTWIPKLAAPAQSPYPSFHSRPIQHPMISPASSQFSVPAKMVNKKDNGKNVPIHDAVYFPPHDYFFTADFLGRLRVWDHRTASLRSEHIPHPSKRNLQCMDLSHDYRTLVIANFDGLVFVYETAALLPHDMHHPEPLEHHVIPLTVRASNSYIPRIKLSHNCNYLVCSTRSGATRVYRMSDVCTIPEPSPQRSDQDSSEPSEDEDRYIMPFREPHLRPGWIWDVSFIEGSDDYLFTCSSTAQVMLWDLNNVGHYTELKGITRPASCIALRERTTPPSLQN 390          
BLAST of Gcaud7373.t1 vs. uniprot
Match: R7QJI8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJI8_CHOCR)

HSP 1 Score: 231 bits (588), Expect = 5.870e-70
Identity = 117/231 (50.65%), Postives = 146/231 (63.20%), Query Frame = 0
Query:  146 SFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSDILNDRASKKSASVSETEEHSVMPVREFTGRPGWIWDASFIEDSEKFLFTCSSVTQVMLWHIDNLGCSVELTGFPKPTVCLAVRER 376
            +F      NK   T V IHDA YYPP D+FFT D  GR RVW+H T     E IPH S+RNLQC++LS DY  +V+ANFDG VF+YD + +LA            + P++ RA+++YI RV+LS    LLVCTT  GA+K+F+M DI   R     A  ++  E SV PV +F   PGWIWDA+F+ DSE F+FTCSS  QVMLW + NLG S E     KP VCLAV+ER
Sbjct:   14 TFQPTKFENKQGSTMVPIHDAIYYPPDDLFFTADAKGRLRVWDHATRRCCKEFIPHHSKRNLQCLELSSDYDILVLANFDGMVFVYDVKKMLAHS---------GIAPISFRANSTYITRVRLSPLSNLLVCTTKQGAVKVFRMQDIKASRTIP--AEGADKREESVTPVWDFGSHPGWIWDAAFVGDSEDFIFTCSSNRQVMLWTLKNLGESAEYKCHDKPVVCLAVKER 233          
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A023FJ51_AMBCJ (Target of rapamycin complex subunit LST8 n=4 Tax=Amblyomma TaxID=6942 RepID=A0A023FJ51_AMBCJ)

HSP 1 Score: 89.0 bits (219), Expect = 7.280e-16
Identity = 92/386 (23.83%), Postives = 155/386 (40.16%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTW-LPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSDILN--------DRASKKSASVSETEEHS-----VMPVREFTG-RPGWIWDASFIEDSEKFLFTCSSVTQVMLWHIDNLGCSVELTGFPKPTVCLAVRE 375
            +LA GGYD +IRL+ + +    R LQ  D QV  L  +            +A  G   +  YD+++ +T+P     ++G  + VTA+GF  +   ++YS  ED + + W L     T Q  +                                 T   ++ A  +P     F  D  G   +W+ RTS   +E +      ++Q +D+      +   +  G  +++   S   S I+ P  L K        A   Y  + + S+   LL  ++      I+K+SD+L         +R  ++S+S S T   +      +P+ + T     W+WD +F  D++ FL T SS T   LW +       E +G  K    LA R+
Sbjct:   14 ILATGGYDHSIRLWQAHSGLCQRTLQHADSQVNVLEITPDRQ-------HIAAGGYQHIRTYDINSTNTNP--VINYEGLGKNVTALGFHED-GLWMYSGGEDFSARIWDLRSRVQTGQRVFE--------------------------------TNAPVNCACLHPNQCELFIGDQSGSIYIWDPRTS--HNEQLTLDLDVSVQHLDIDPSGQYMAAIDNKGMCYLFLLGSGSDSQISTPERLLK------FAAHKRYGLKCRFSYDSELLATSSADATACIWKVSDLLASGEDSGPPERLVRRSSSQSSTSTRAWNLADTLPMSKMTNANQRWVWDVAFSYDAQ-FLITASSDTVARLWSVAAGEVKREYSGHQKALTALAFRD 348          
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A293LUC3_ORNER (Uncharacterized protein (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A293LUC3_ORNER)

HSP 1 Score: 85.5 bits (210), Expect = 7.900e-15
Identity = 91/371 (24.53%), Postives = 149/371 (40.16%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSDILNDRASKKSASVSETEEHSVMPVREFTGRPGWIWDASFIEDSEKFLFTCSSVTQVMLWHIDNLGCSVELTGFPKPTVCLAVRE 375
            +LA GGYD +IRL+ + +    R LQ  D QV  L  +            LA  G   +  YD+++++T+P     ++G  + VTA+GF      ++Y+  ED + + W                            S T S       N P      ++ A  +P     F  D  G   VW+ R++   SE +   S  ++Q +D+      +V  +  G  ++Y     LAS  N+   ++ P   L   A   Y  + +LS    LLV ++      +++M+D+            + + E +   VR       W+WD +F  D+  FL T SS +   LW I       E +G  K    LA R+
Sbjct:    9 ILATGGYDHSIRLWQAHSGLCQRTLQHADSQVNCLDITPDRH-------HLAAGGYQHIRTYDINSSNTNP--IVNYEGVAKNVTALGFH-EQGLWMYTGGEDFSARIW-------------------------DTRSRTASCQRMFETNAP------VNCACLHPNQCELFIGDQSGVIYVWDLRSN--HSEQLVLESDVSVQHLDVDAMGQYLVAIDNKGNCYVY----TLASSNNQ---MASPQKKLKFLAHKRYGLKCRLSPDAGLLVTSSADMTACVWRMADLFG----------AGSGEDATPTVRLGDPNQRWVWDLAFSYDAH-FLITASSDSVARLWSISTGEVKREFSGHQKALTALAFRD 318          
BLAST of Gcaud7373.t1 vs. uniprot
Match: L7M948_RHIPC (Target of rapamycin complex subunit LST8 n=7 Tax=Ixodidae TaxID=6939 RepID=L7M948_RHIPC)

HSP 1 Score: 80.1 bits (196), Expect = 7.130e-13
Identity = 86/384 (22.40%), Postives = 155/384 (40.36%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSDILN-------DRASKKSASVSETEEHS-----VMPVREFTG-RPGWIWDASFIEDSEKFLFTCSSVTQVMLWHIDNLGCSVELTGFPKPTVCLAVRE 375
            +LA GGYD +IRL+ + +    R LQ  D QV  L  +            +A  G   +  YD+++ +T+P     ++G  + VTA+GF  +   ++YS  ED + + W  +  A +Q+    F                              T   ++ A  +P     F  D  G   VW+ R +   +E +      ++Q +D+      +   +  G  +++   S   S I+ P  + K        A   Y  + + S    LL  ++     +++K+S+++        +R  ++S+S S T   +     + P+ E +     W+WD +F  D++  L T SS T   LW +       E +G  K    LA R+
Sbjct:   14 ILATGGYDHSIRLWQAHSGLCQRTLQHADSQVNVLEITPDRQ-------HIAAGGYQHIRTYDINSTNTNP--IINYEGLGKNVTALGFHED-GLWMYSGGEDFSARIWDSR--ARAQTCQRVFE-----------------------------TNAPVNCACLHPNQCELFIGDQSGSIYVWDLRNN--HNEQLTLDLDVSVQHLDIDSTGQYLAAIDNKGVCYLFLLGSGSDSQISSPERMLK------FEAHKRYGLKCRFSLDSELLATSSADTTARVWKVSNLIASGDDNGPERLVRRSSSQSSTGTRAWKVANIPPMSEMSNVNQRWVWDIAFSYDAQ-ILITASSDTVARLWSVSPAEVKREYSGHQKALTALAFRD 347          
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A482RNG2_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNG2_9ARCH)

HSP 1 Score: 79.0 bits (193), Expect = 1.560e-12
Identity = 76/288 (26.39%), Postives = 118/288 (40.97%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLT-IRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSD 291
            LLA GGYD  +RL+D+ +    R L   D+QV  L  S    +       +A  G+ ++ +YDV  N +SP     +  H   VT +GF+  H  ++YS SEDGT + W   L A      PS+H        +   SA                TV +H     P      T D  G  RVW+   +   +E +P      +  I ++ D S  V AN++G  F +   S            S+   P+  +    +Y+   +LS     L  T+    +K++ + D
Sbjct:    4 LLATGGYDATVRLWDASSGMCYRTLSHPDRQVNTLCISPDKKM-------IAAGGNGTIKLYDV--NSSSPEPVVSYDEHKGNVTCIGFQ-RHGRWMYSCSEDGTTKIW--DLRA------PSYHRD------YECRSAV--------------NTVVLH-----PNQGDLITGDHSGAVRVWDLTANRCVNELVP-DGETPISNISVASDASMCVAANYNGNCFFWTPLS------------SEEYMPIKKLEVHKAYVLSCRLSPDVRFLATTSSDHTVKLWNVRD 235          
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A059DHJ0_EUCGR (Uncharacterized protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059DHJ0_EUCGR)

HSP 1 Score: 69.7 bits (169), Expect = 6.360e-10
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTW 113
            +LA   YD  IR +++ +    R +Q+ D QV RL  +           +LAVAG+PS+ ++DV++N  +P     F  H   V AVGF+ + N ++YS SEDGT++ W
Sbjct:    8 ILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPH-------KRYLAVAGNPSIRLFDVNSN--TPQPVMSFDSHTNNVMAVGFQYDGN-WMYSGSEDGTVRIW 106          
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A059DIX9_EUCGR (Target of rapamycin complex subunit LST8 n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059DIX9_EUCGR)

HSP 1 Score: 69.7 bits (169), Expect = 1.430e-9
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTW 113
            +LA   YD  IR +++ +    R +Q+ D QV RL  +           +LAVAG+PS+ ++DV++N  +P     F  H   V AVGF+ + N ++YS SEDGT++ W
Sbjct:    8 ILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPH-------KRYLAVAGNPSIRLFDVNSN--TPQPVMSFDSHTNNVMAVGFQYDGN-WMYSGSEDGTVRIW 106          
BLAST of Gcaud7373.t1 vs. uniprot
Match: B3RN36_TRIAD (Target of rapamycin complex subunit LST8 n=2 Tax=Trichoplax TaxID=10227 RepID=B3RN36_TRIAD)

HSP 1 Score: 69.7 bits (169), Expect = 1.560e-9
Identity = 72/287 (25.09%), Postives = 122/287 (42.51%), Query Frame = 0
Query:    5 LLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSD 291
            LLA GGYD  IRL+   +    R LQ  + QV  L+ +       D  L +A AG   V +YDV  +  +PN      G  + +TAVGF  +   ++++A EDG ++ W                    R+P    +  T S     V+N        I+ A  +P        D  G   +W+ + +  +SE +   +   + C+D+  + S + +A  +G   +Y  +    S+      +  P T   I   ++Y+ + + SH   LL  T+  G IK+++  D
Sbjct:    8 LLATGGYDHTIRLWQPHSGVCHRTLQHPESQVNALSLT------PDKQL-IAAAGFQCVRLYDV--HGCNPNPVINCDGVQKNITAVGFHGD-GRWMFTAGEDGKVRIW----------------DLRSRNPQ---SQRTLS-----VSN-------LINCAVLHPNQITIIAGDRSGTLHIWDLKLN--QSERMVVSTDNAITCVDIDREASMLAVACSNGICHVYALRGSFDSE---ERLIINPKTQ--IHCHDTYVIKCRFSHDSTLLATTSSDGTIKVWRTCD 246          
BLAST of Gcaud7373.t1 vs. uniprot
Match: A0A2G5BER6_COERN (WD40 repeat-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BER6_COERN)

HSP 1 Score: 68.9 bits (167), Expect = 2.930e-9
Identity = 71/294 (24.15%), Postives = 127/294 (43.20%), Query Frame = 0
Query:    2 NPFLLAVGGYDTNIRLFDSVNNEPVRVLQFC-DQQVLRLAFSGSAPVPADAPLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAFVYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAKLVNNKPDGTTVAIHDAAYYPPL--DVFFTVDFLGRFRVWNHRTSSLRSEHIPHPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKPLTPLTIRASNSY-IPRVKLSHSGALLVCTTGSGAIKIFKMSD 291
            +P +L   GYD  IR++D++ +   R + +  + Q+ R+A S           +LAVAG+PSV++YDV    TS        GH   VTAV F  ++  F+ + SED +++ W                               ++   K V N       A++D A +P    ++  + D  G  RVW+ R   +  + IP P    ++ + +S +   +V  N  G VF+Y  + ++ +      T+   L  +   A   Y I R   S +G  L   +   + K++++++
Sbjct:    4 SPVILVTAGYDHTIRMWDALKSTCTRTIPYTTESQINRMALSSDKH-------YLAVAGNPSVSLYDVFG--TSDLPVLKLDGHTNNVTAVEFTQDYK-FLATGSEDSSIRWW-----------------------------DVYAGDCKYVLNNDS----AVNDIAIHPDSRQELIVSCDQGGLIRVWSWRRREVLCQVIPQPDVA-VRSVAVSPNGQLVVAGNNLGQVFVY--RLIIDTSPQAGRTVELELY-INFEAHYGYRITRTLFSSNGMYLATCSSDHSAKLWQLTE 250          
The following BLAST results are available for this feature:
BLAST of Gcaud7373.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IZ83_9FLOR3.190e-18263.85Target of rapamycin complex subunit LST8 n=1 Tax=G... [more]
R7QJI8_CHOCR5.870e-7050.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A023FJ51_AMBCJ7.280e-1623.83Target of rapamycin complex subunit LST8 n=4 Tax=A... [more]
A0A293LUC3_ORNER7.900e-1524.53Uncharacterized protein (Fragment) n=2 Tax=Ornitho... [more]
L7M948_RHIPC7.130e-1322.40Target of rapamycin complex subunit LST8 n=7 Tax=I... [more]
A0A482RNG2_9ARCH1.560e-1226.39WD40 repeat domain-containing protein n=1 Tax=arch... [more]
A0A059DHJ0_EUCGR6.360e-1036.70Uncharacterized protein n=1 Tax=Eucalyptus grandis... [more]
A0A059DIX9_EUCGR1.430e-936.70Target of rapamycin complex subunit LST8 n=2 Tax=E... [more]
B3RN36_TRIAD1.560e-925.09Target of rapamycin complex subunit LST8 n=2 Tax=T... [more]
A0A2G5BER6_COERN2.930e-924.15WD40 repeat-like protein n=1 Tax=Coemansia reversa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 74..114
e-value: 0.0095
score: 25.1
coord: 249..288
e-value: 25.0
score: 8.2
coord: 191..232
e-value: 13.0
score: 9.9
coord: 22..67
e-value: 150.0
score: 3.3
coord: 311..351
e-value: 0.26
score: 20.4
coord: 148..188
e-value: 170.0
score: 3.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 78..113
e-value: 0.068
score: 14.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 81..113
score: 11.611251
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 148..423
e-value: 1.6E-18
score: 68.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..132
e-value: 7.0E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR19842:SF0TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8coord: 3..375
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 81..113
score: 9.704691
IPR037588Target of rapamycin complex subunit LST8PANTHERPTHR19842G BETA-LIKE PROTEIN GBLcoord: 3..375
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_85_length_54060_cov_4.846356contigNODE_85_length_54060_cov_4.846356:44641..46188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7373.t1Gcaud7373.t1Gracilaria caudata M_176_S67 malemRNANODE_85_length_54060_cov_4.846356 44641..46188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7373.t1 ID=Gcaud7373.t1|Name=Gcaud7373.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=428bp
MNPFLLAVGGYDTNIRLFDSVNNEPVRVLQFCDQQVLRLAFSGSAPVPAD
APLFLAVAGSPSVAVYDVSTNHTSPNTFAIFQGHLEPVTAVGFEPNHNAF
VYSASEDGTLQTWLPKLAATSQSAYPSFHSHSLRHPMFSAASATFSFPAK
LVNNKPDGTTVAIHDAAYYPPLDVFFTVDFLGRFRVWNHRTSSLRSEHIP
HPSRRNLQCIDLSHDYSTIVMANFDGFVFIYDTQSVLASDINRPNTLSKP
LTPLTIRASNSYIPRVKLSHSGALLVCTTGSGAIKIFKMSDILNDRASKK
SASVSETEEHSVMPVREFTGRPGWIWDASFIEDSEKFLFTCSSVTQVMLW
HIDNLGCSVELTGFPKPTVCLAVRERRHPSSHSNSKRLPAHIQEPLFSEI
VTLERRRGKQSHSSSIEHIKNDQDMTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037588MLST8
IPR036322WD40_repeat_dom_sf