Gcaud7366.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7366.t1
Unique NameGcaud7366.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length314
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7366.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..161
e-value: 9.4E-7
score: 29.9
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 38..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_85_length_54060_cov_4.846356contigNODE_85_length_54060_cov_4.846356:27411..28446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7366.t1Gcaud7366.t1Gracilaria caudata M_176_S67 malemRNANODE_85_length_54060_cov_4.846356 27411..28446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7366.t1 ID=Gcaud7366.t1|Name=Gcaud7366.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=314bp
MLQEVAEKNTAVVSSVLTTCPSVYYVGKRFTTVKVADNKKLRVLHLEERT
NDFDLPNYSANRFRMCDISADGMRVVAACVDNSFGVWDVRRKLRIATIGA
YPKAPLSCSLASDGSALIVSYVDRTLHFFSGLLFGFTVNQTKQDIERKGA
RGWYDVTFGKDPVPLDRAMDGLDSLLNDLELAPVSEEYVAHAMESVLKNK
TQTEVTRAEFLQAFCVLQSKIFDRLDFEKLRKEWTQLFDRRAGQGDDASL
RIRPTGKRLVTQIYEQLSSNGALSEDDAGQLLSEYTHKRPRRVVREEFLL
ACEAMAKKSQEAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf