Gcaud7350.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7350.t1
Unique NameGcaud7350.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length189
Homology
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BLAST of Gcaud7350.t1 vs. uniprot
Match: A0A2V3IME8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME8_9FLOR)

HSP 1 Score: 189 bits (480), Expect = 8.380e-58
Identity = 94/163 (57.67%), Postives = 119/163 (73.01%), Query Frame = 0 
Query:   28 ATNQYMTYEWCEVKGAFGLCEFAFEGVYGHYDHVEWGTGNYSMNGYMNGPFTPKIVKKNNDY-QTIIGYVKSVDTLRDEFHCRAVV--SGNYWEKQCDYRTVPGRLFGTANIPGVRGSGITRANGAVMGRHMSNGACVPVYLTEYEVLDTSVSPPRVKEVVRM 187
            A NQ +TYEWCEVKG  GLC FAF+ +YG +DHV+WG+GN+S+ G  +G FTP+IV K+ +Y  + IG VKSVD  RD F C      +G+Y+E +C Y  +PGRLF    I G RGSGI+R+    + RH+ NGACV +YLTEYE+LDTSVSPPRV+EVVRM
Sbjct:   27 AINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAVRIRGTRGSGISRSREHALRRHVPNGACVLMYLTEYEILDTSVSPPRVREVVRM 189
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BLAST of Gcaud7350.t1 vs. uniprot
Match: A0A2V3IB93_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IB93_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 9.490e-32
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:   28 ATNQYMTYEWCEVKGAFGLCEFAFEGVYGHYDHVEWGTGNYSMNGYMNGPFTPKIVKKNNDY-QTIIGYVKSVDTLRDEFHCRAVV--SGNYWEKQCDYRTVPGRLFGTANI 136
            A NQ +TYEWCEVKG  GLC FAF+ +YG +DHV+WG+GN+S+ G  +G FTP+IV K+ +Y  + IG VKSVD  RD F C      +G+Y+E +C Y  +PGRLF    I
Sbjct:   27 AINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAVRI 138
The following BLAST results are available for this feature:
BLAST of Gcaud7350.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IME8_9FLOR8.380e-5857.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IB93_9FLOR9.490e-3252.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1542_length_9851_cov_4.655123contigNODE_1542_length_9851_cov_4.655123:75..641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7350.t1Gcaud7350.t1Gracilaria caudata M_176_S67 malemRNANODE_1542_length_9851_cov_4.655123 75..641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7350.t1 ID=Gcaud7350.t1|Name=Gcaud7350.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=189bp
MKLVFTVIPFVLFALVSPLQANDIPSWATNQYMTYEWCEVKGAFGLCEFA
FEGVYGHYDHVEWGTGNYSMNGYMNGPFTPKIVKKNNDYQTIIGYVKSVD
TLRDEFHCRAVVSGNYWEKQCDYRTVPGRLFGTANIPGVRGSGITRANGA
VMGRHMSNGACVPVYLTEYEVLDTSVSPPRVKEVVRMC*
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