Gcaud7339.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7339.t1
Unique NameGcaud7339.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length164
Homology
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BLAST of Gcaud7339.t1 vs. uniprot
Match: A0A2V3J3C3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C3_9FLOR)

HSP 1 Score: 118 bits (296), Expect = 6.570e-31
Identity = 64/167 (38.32%), Postives = 93/167 (55.69%), Query Frame = 0 
Query:    2 MSKGLVLIALVLGFAKAQVLICTSKQ-CMTEFGKRVKCSGVNPGEKTLFIQSFQGGDGRYYGYRQIAVSNLFVTEDDDQGGFTSGGNEAVQGTVAPTRTLPDTSRELKQAELKTMDRQERAQA------FSFPGYRGPICVLDEAAPDFGGNVVTFGRPFGLCCRAC 161
            +  G+  +A+++GFA    + C+ K  C T  G  +KCSGV    KTLF+++F G DGRYYGY+Q A++NLF+ +D++Q G    G      +  PT T+   +   K AE    +   R Q       +SFPG+ GPIC + +         V FG+PFGLCC+AC
Sbjct:    3 LMSGIASLAVLIGFALGATVYCSEKGGCATVGGTLLKCSGVAAAGKTLFLRTFLGSDGRYYGYQQFAIANLFIDDDEEQNGGL--GPILTLPSKPPTHTILRVAAGEKMAEASARNALPRPQIIEQFRPYSFPGFSGPICEVIKTQK----RTVFFGKPFGLCCKAC 163
The following BLAST results are available for this feature:
BLAST of Gcaud7339.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3C3_9FLOR6.570e-3138.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4090_length_2594_cov_3.260487contigNODE_4090_length_2594_cov_3.260487:302..793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7339.t1Gcaud7339.t1Gracilaria caudata M_176_S67 malemRNANODE_4090_length_2594_cov_3.260487 302..793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7339.t1 ID=Gcaud7339.t1|Name=Gcaud7339.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=164bp
MMSKGLVLIALVLGFAKAQVLICTSKQCMTEFGKRVKCSGVNPGEKTLFI
QSFQGGDGRYYGYRQIAVSNLFVTEDDDQGGFTSGGNEAVQGTVAPTRTL
PDTSRELKQAELKTMDRQERAQAFSFPGYRGPICVLDEAAPDFGGNVVTF
GRPFGLCCRACGY*
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