Gcaud7326.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7326.t1
Unique NameGcaud7326.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length195
Homology
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BLAST of Gcaud7326.t1 vs. uniprot
Match: A0A2V3IMG5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG5_9FLOR)

HSP 1 Score: 148 bits (374), Expect = 7.140e-42
Identity = 81/186 (43.55%), Postives = 114/186 (61.29%), Query Frame = 0 
Query:    9 LLFLVLALITECSADSCAPTVPIAKELIGKSFAMLSECYRPGMVTDVSIYGKMIVLRIDRGIRFSNCPESYLIRYRTPNVTPMIIWYPEWD-PRSSTSSDSEEEGASCEEIQRKNRVEMFPVEETRFNFTAALAYMMPILRDVRDFECRVDENGVWKQVQGRGYENADVQAVMTYLDTIAFQYELC 193
            +LF+ L L+      +C    P  KELIG++FA L +CYRP     VS+Y KM +L ++     + CPE YL+ YR P VTPMII +P  + P +  +S S+ E   C++ Q+K +  +FPV ET+  FTAA+  M+P L+ +RDF C   + G   QVQGR Y+N DV  +M YL  +AF+YELC
Sbjct:   11 MLFVALGLV---QGQTCKQRTPFKKELIGQTFAKLDDCYRPRSSDYVSVYKKMFILTLNENPSPA-CPERYLVVYRNPKVTPMIIKHPYLEFPLNGGASGSDVE-EWCKKEQQKKKTVLFPVTETKKEFTAAVKAMLPRLKAIRDFGCTATKEGFIIQVQGRAYDNVDVADIMAYLHAVAFKYELC 191
The following BLAST results are available for this feature:
BLAST of Gcaud7326.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG5_9FLOR7.140e-4243.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_605_length_21023_cov_4.463214contigNODE_605_length_21023_cov_4.463214:15268..15852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7326.t1Gcaud7326.t1Gracilaria caudata M_176_S67 malemRNANODE_605_length_21023_cov_4.463214 15268..15852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7326.t1 ID=Gcaud7326.t1|Name=Gcaud7326.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=195bp
MELKKRFFLLFLVLALITECSADSCAPTVPIAKELIGKSFAMLSECYRPG
MVTDVSIYGKMIVLRIDRGIRFSNCPESYLIRYRTPNVTPMIIWYPEWDP
RSSTSSDSEEEGASCEEIQRKNRVEMFPVEETRFNFTAALAYMMPILRDV
RDFECRVDENGVWKQVQGRGYENADVQAVMTYLDTIAFQYELCV*
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