Gcaud7325.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7325.t1
Unique NameGcaud7325.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length184
Homology
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BLAST of Gcaud7325.t1 vs. uniprot
Match: A0A2V3IMG5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG5_9FLOR)

HSP 1 Score: 65.5 bits (158), Expect = 6.370e-10
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0 
Query:    1 MIIKQPALRPPTSVLVGSNEEFVEWCGENQKRNRVEMFPVEETRFNFTAALAYMMPILRKVRDFECDLNENGMWEQVQGR 80
            MIIK P L  P +    S  +  EWC + Q++ +  +FPV ET+  FTAA+  M+P L+ +RDF C   + G   QVQGR
Sbjct:   89 MIIKHPYLEFPLNG-GASGSDVEEWCKKEQQKKKTVLFPVTETKKEFTAAVKAMLPRLKAIRDFGCTATKEGFIIQVQGR 167
The following BLAST results are available for this feature:
BLAST of Gcaud7325.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG5_9FLOR6.370e-1042.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_605_length_21023_cov_4.463214contigNODE_605_length_21023_cov_4.463214:13493..14348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7325.t1Gcaud7325.t1Gracilaria caudata M_176_S67 malemRNANODE_605_length_21023_cov_4.463214 13493..14348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7325.t1 ID=Gcaud7325.t1|Name=Gcaud7325.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=184bp
MIIKQPALRPPTSVLVGSNEEFVEWCGENQKRNRVEMFPVEETRFNFTAA
LAYMMPILRKVRDFECDLNENGMWEQVQGRGTVHRTEVSVYPGMIVLEIG
LIRYRTPNVTPMIIKHPYLLRPPTADSEELDEWCRENQGRNRVEMFPVEE
TRFNFTAALGYIMPILRNIRDCEFDLNEHGMWE*
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