Gcaud7276.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7276.t1
Unique NameGcaud7276.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length359
Homology
BLAST of Gcaud7276.t1 vs. uniprot
Match: A0A2V3ISV1_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV1_9FLOR)

HSP 1 Score: 185 bits (469), Expect = 3.550e-52
Identity = 107/302 (35.43%), Postives = 159/302 (52.65%), Query Frame = 0
Query:   50 FVNAQAIASSNAADCVMTDQFCPCAEMQAPGSCMNHNGNNQCSLGACKPSYRCDCLGYEMCKRSPCAMYVGDSNVTPSGTGLFPCHRNPTNAVCTTFDYVMDTAVAMENIYTAVINTNEESSAMMMEAYEFVAAIEEDIMAVNEAVKNIGRYRHRMTAHEADEIEKEAETVISFVADSGELALIASREAEKVYQASRDVAEIRHQVKTAEQDEKPTEQALNEAQQRAKGSDEDCTQCASLREQIENTKKARKEAILKAADISKKARECNRNAGEHRNKVLGNRAKAAEGKQRLLSRIDEISK 351
            FV AQA   +    CV +D  CPC++M+  G CM  +    C LG C   YRCDCLGY MCKR+ CAMY    NV PS +  F CH  P    CT FD+++DT  A EN      ++N+ +SA   E+Y+ VA  + D+ AVNEA+++I  +R  ++  E DE+EK+AE V     ++   AL  S +A +V +  R VA+++      +++ K  +                                 RKE+  KA + +K+ARE   N+ E R +V+GN +K+AE K R+ SR++ + K
Sbjct:   24 FVQAQA---TQGVGCVFSDDSCPCSQMEPSGVCMKPDNEGMCLLGECNTGYRCDCLGYTMCKRTKCAMYTAVENVIPSESVPFGCHLTPDAGQCTAFDHMLDTLDAAENALVEASHSNDAASAYTAESYQLVAKAQSDVSAVNEALRSIEPFRDELSDEETDELEKDAEVVRQSATEAAREALQVSLKAAEVNKERRLVADLKKTASKRDKEAKRAKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESCSKAGEAAKRAREGRSNSNEGRKRVMGNCSKSAEAKARIESRVENMDK 322          
BLAST of Gcaud7276.t1 vs. uniprot
Match: A0A2V3IH85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH85_9FLOR)

HSP 1 Score: 165 bits (418), Expect = 1.020e-44
Identity = 104/313 (33.23%), Postives = 161/313 (51.44%), Query Frame = 0
Query:   30 NASKMSVLVLGLMSALICFVFVNAQAIASSNAADCVMTDQFCPCAEMQAPGSCMNHNGNNQCSLGACKPSYRCDCLGYEMCKRSPCAMYVGDSNVTPSGTGLFPCHRNPTNAVCTTFDYVMDTAVAMENIYTAVINTNEESSAMMMEAYEFVAAIEEDIMAVNEAVKNIGRYRHRMTAHEADEIEKEAETVISFVADSGELALIASREAEKVYQASRDVAEIRHQVKTAEQDEKPTEQALNEAQQRAKGSDEDCTQCASLREQIENTKKARKEAILKAADISKKARECNRNAGEHRNKVLGNRAKAAEGKQRL 342
            ++ ++ +L  GL++ L   V V++QA   S    CV  +  CPC++M+  G CM    +  C LG C+P YRCDCLGY MCKRS CAMY    N  PS +  F CH  P    CTTFD+V+DT  + EN     I+ +E ++    ++ E    I+ D+ AV++ +K I  +R  ++  E  +IE++ + V+   A++   A   S++A KV++     AE + + + A+ + K  EQ L E +               L+   E   K RKE   KA + +K  R  + +    R++V  N  KA E K RL
Sbjct:    6 SSFRIILLATGLVNIL---VLVHSQA---SQGVGCVFKEDSCPCSQMEPSGVCMKPGSDGLCLLGKCQPGYRCDCLGYAMCKRSKCAMYTAVENAIPSESIPFRCHLTPDAGRCTTFDHVLDTVESAENAAVDSIHASEAATTYTAQSLEMAVMIQADVAAVSDTLKAIEPFRDGLSNEEIADIEQDTQIVVESAAEAAREASEVSKDAAKVFKNRLLAAEFKKEARQADMEAKHAEQKLKENKXXXXXXXXXXXXXNELKAASEKHTKNRKEWCSKAGEAAKLGRSGSMDCAAGRDRVNQNLVKALEAKDRL 312          
BLAST of Gcaud7276.t1 vs. uniprot
Match: A0A2V3ISW3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISW3_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 1.160e-16
Identity = 45/127 (35.43%), Postives = 78/127 (61.42%), Query Frame = 0
Query:  202 RHRMTAHEADEIEKEAETVISFVADSGELALIASREAEKVYQASRDVAEIRHQVKTAEQDEKPTEQALNEAQQRAKGSDEDCTQCASLREQIENTKKARKEAILKAADISKKARECNRNAGEHRNKV 328
            RH+M+A E + IEK+ + ++  VA++G LAL AS++   VY+ SR +A +  + + A ++ +  E  L   + RA+    +C  C  LR+++E  K  RK A++    +SKKARE +RNA ++ N++
Sbjct:    5 RHKMSAQEIENIEKDGDLIVDAVAEAGFLALAASQDGNTVYKGSRTLARLAAKARKANRNAEVAEMRLKRDETRAEKDATECAICPELRDEVERLKSERKNAVIAVGQVSKKAREDSRNARDNHNEI 131          
The following BLAST results are available for this feature:
BLAST of Gcaud7276.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ISV1_9FLOR3.550e-5235.43Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IH85_9FLOR1.020e-4433.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISW3_9FLOR1.160e-1635.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..358
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_513_length_23321_cov_4.687990contigNODE_513_length_23321_cov_4.687990:21673..22749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7276.t1Gcaud7276.t1Gracilaria caudata M_176_S67 malemRNANODE_513_length_23321_cov_4.687990 21673..22749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7276.t1 ID=Gcaud7276.t1|Name=Gcaud7276.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=359bp
MLFIQLNVYVYTPPTRTIPSSQAYADANMNASKMSVLVLGLMSALICFVF
VNAQAIASSNAADCVMTDQFCPCAEMQAPGSCMNHNGNNQCSLGACKPSY
RCDCLGYEMCKRSPCAMYVGDSNVTPSGTGLFPCHRNPTNAVCTTFDYVM
DTAVAMENIYTAVINTNEESSAMMMEAYEFVAAIEEDIMAVNEAVKNIGR
YRHRMTAHEADEIEKEAETVISFVADSGELALIASREAEKVYQASRDVAE
IRHQVKTAEQDEKPTEQALNEAQQRAKGSDEDCTQCASLREQIENTKKAR
KEAILKAADISKKARECNRNAGEHRNKVLGNRAKAAEGKQRLLSRIDEIS
KRVINVDI*
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