Gcaud7262.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A2V3IYB8_9FLOR (Poly(A)-specific ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB8_9FLOR) HSP 1 Score: 476 bits (1226), Expect = 6.170e-168 Identity = 234/296 (79.05%), Postives = 255/296 (86.15%), Query Frame = 0
Query: 1 MARTSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLGMTTKSYGDQRPTSLSPMYTTPRKALPGTDNSNGNNEGAA 296
MAR RIRQVWASNLE+EIL L +LS+ Y HIAMDTEFPGVVLRPIG QAT PDA YCTHRLN DLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLS+DMYAQDSIELL ASGIDFAEHE+NGIDVLTFGELI SSGLVLNPR++W+ FSGGYDFCYLIK+LTA+PLPEQEA FFEYL LFFP +YDLKYL LS+DRL+GGLNKVAE LGCER G MHQAGSDSLLTLDV+FKM+EQVF+GVID S G+LY LGM K P S SP +T PRKA+ GTD SNG+ G +
Sbjct: 1 MARVPRIRQVWASNLEEEILLLCELSETYTHIAMDTEFPGVVLRPIGQQATTPDAAYCTHRLNADLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSSDMYAQDSIELLSASGIDFAEHERNGIDVLTFGELIISSGLVLNPRITWVTFSGGYDFCYLIKVLTAIPLPEQEAEFFEYLHLFFPCLYDLKYLMLSTDRLYGGLNKVAETLGCERIGNMHQAGSDSLLTLDVYFKMREQVFNGVIDASKNGVLYTLGMGMKDSVGNLPPSSSPTFT-PRKAIAGTDGSNGSGNGTS 295
BLAST of Gcaud7262.t1 vs. uniprot
Match: M2W4R8_GALSU (Poly(A)-specific ribonuclease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4R8_GALSU) HSP 1 Score: 325 bits (833), Expect = 4.010e-108 Identity = 162/285 (56.84%), Postives = 200/285 (70.18%), Query Frame = 0
Query: 7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMTTKSYGDQRPTSLSPMYTTPRKALPGTDNSNG 290
I++VWA NLE+E+ +S + D YN +AMDTEFPGVV RPIGS + D Y T R NVDLLKIIQLG+S + +G PE C WQFNF FSL+ D+YAQDSI+LL SGIDF EHE++GIDV FGEL+ SSG+VLN + WI F GYDF YL+K+LT +P +E+ FFE L+ +FPR YD+KYL ++SDRL+GGLNK+AE+L ER G MHQAGSDSLLT+ VFFKMKE +F G ID+ CG+LY LG YT GT+N+NG
Sbjct: 11 IKEVWAENLEKELANISSILDKYNFVAMDTEFPGVVARPIGSFRSNTDYHYQTLRCNVDLLKIIQLGLSFSDSEGNIPEGCACWQFNFRFSLNEDIYAQDSIDLLTRSGIDFDEHERHGIDVERFGELLISSGIVLNEDICWISFHSGYDFGYLLKILTCSEMPAEESEFFELLNTYFPRFYDMKYLMMASDRLYGGLNKLAEILEVERVGQMHQAGSDSLLTMKVFFKMKESIFSGQIDERRYCGVLYGLGSAAAFGHASHEAERRYNYTNNEN---GTNNNNG 292
BLAST of Gcaud7262.t1 vs. uniprot
Match: UPI001E1D4D66 (CCR4-NOT transcription complex subunit 7-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4D66) HSP 1 Score: 317 bits (813), Expect = 1.520e-105 Identity = 163/272 (59.93%), Postives = 194/272 (71.32%), Query Frame = 0
Query: 6 RIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLGMT-----TKSYGDQRPTSLS 272
RI VWA NL E+ ++ L+D YNH+A+DTEFPGVV+RP+G+ A D Y T R NVDLL+IIQLGISL+ DG+ P E WQFNF FSL DMYAQDSIELL SGI+FAEHE+NGI F EL+TSSGLVLN + WI F GGYDF YL+K+LTA LP E+ FFE L L+FP+ YD+KYL S + L GGLNK+AE GCER G+MHQAGSDSLLTL VFF+M + F G ID+S GILY LG+ T + D RP + S
Sbjct: 4 RIVDVWAHNLAAEMDRICALADTYNHVALDTEFPGVVVRPVGA-AQAVDIHYQTLRCNVDLLRIIQLGISLSNADGEGPSEVACWQFNFEFSLEQDMYAQDSIELLTKSGINFAEHERNGIAPNDFAELLTSSGLVLNDGMKWISFHGGYDFGYLLKVLTASDLPTAESEFFELLELYFPQKYDMKYLMRSRENLFGGLNKLAETYGCERVGSMHQAGSDSLLTLHVFFRMMRETFGGAIDESLEGILYGLGVASDIAPTPVHDDSRPLAAS 274
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A1X6NJJ6_PORUM (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJJ6_PORUM) HSP 1 Score: 305 bits (781), Expect = 4.570e-100 Identity = 141/256 (55.08%), Postives = 196/256 (76.56%), Query Frame = 0
Query: 7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLGMTTKS 262
IR+VWA NL +E+ +S++ + YNHIA+DTEFPGVV RP+G+ + D Y T R+NVDLLKIIQLG++ + E+G PE+ WQFNF FSL++D+YA D+IELL +GIDF++HE++GIDV FGEL+TSSG+VLN V+W+ F G+DF YL+K+LT+ PLP E+ F + L+ +FPR+YD+KYL L+SD+L+GGLNK+AE+ +R G+MHQAGSDSL+TL VF +MKE+ F G + GIL+ +G + +
Sbjct: 6 IREVWAGNLAEEMEAISEVVERYNHIALDTEFPGVVARPVGAAGS--DYQYQTLRVNVDLLKIIQLGLTFSDEEGNMPEDVQCWQFNFHFSLASDIYAADAIELLTQAGIDFSQHERHGIDVAEFGELLTSSGVVLNEDVTWVSFHSGFDFGYLLKVLTSCPLPAAESDFLDLLATYFPRVYDMKYLMLASDKLYGGLNKLAEIYHVDRTGSMHQAGSDSLVTLHVFLRMKEETFRGAVPVPLVGILFGIGSASST 259
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A5J4YRQ4_PORPP (Poly(A)-specific ribonuclease n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRQ4_PORPP) HSP 1 Score: 296 bits (759), Expect = 6.610e-97 Identity = 143/252 (56.75%), Postives = 183/252 (72.62%), Query Frame = 0
Query: 6 RIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLG 257
+IR VW SNLE+E++ +S + + Y+H+AMDTEFPGVV RP+G D Y T R NVDLLKIIQLG++ A EDG E+C WQFNF FSL +DMYAQDSI+LL SGIDF + E++GIDVL FGEL+ SGLVLN V+WI F +DF YLIK+LT LP E+ FFE + L+FPR++D+KYL +DR +GGL+K+AE+ +R+G MHQAGSDSLLTL+VFF+++ F G + ILY LG
Sbjct: 4 QIRDVWESNLEEEMMVISGVLEKYSHVAMDTEFPGVVARPVGGFRNSSDYQYQTLRCNVDLLKIIQLGLAFADEDGNLAEDCPCWQFNFKFSLQDDMYAQDSIDLLTQSGIDFEQFERDGIDVLHFGELLIGSGLVLNDNVTWISFHSSFDFGYLIKVLTCSNLPSDESEFFELMQLYFPRLWDMKYLL--TDRFYGGLSKLAEVYEVKRYGKMHQAGSDSLLTLEVFFRVRASTFQGHVHKDMMNILYGLG 253
BLAST of Gcaud7262.t1 vs. uniprot
Match: L8GRD9_ACACA (Poly(A)-specific ribonuclease n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRD9_ACACA) HSP 1 Score: 292 bits (747), Expect = 1.610e-95 Identity = 146/259 (56.37%), Postives = 180/259 (69.50%), Query Frame = 0
Query: 7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMTTKSYG 264
IR+VWA NLE+E+ + D+ + Y +IAMDTEFPG+V RPIG+ + + Y T R NVDLLKIIQLG++ +G+ P TWQFNF FSL+ DMYAQDSI+LL SGI+F HE++G+DV FGEL+TSSG+VL+ R+ WI F GYDF YL+K+LT PLP QE FFE L +FP IYD+KYL S L GGLN++A L ER G HQAGSDSLLT FFKMK F +DDS G+LY LG K+ G
Sbjct: 12 IREVWAENLEEEMAHIRDIVEDYPYIAMDTEFPGIVARPIGNFKSPSEYHYQTLRCNVDLLKIIQLGLTFTDGEGRLPPGVATWQFNFKFSLTEDMYAQDSIDLLTRSGINFKRHEEHGVDVSHFGELLTSSGIVLDDRIKWISFHSGYDFGYLLKILTCKPLPAQEEEFFELLLAYFPCIYDIKYLMKSCKSLKGGLNELANDLEVERIGPQHQAGSDSLLTSATFFKMKRMFFENNLDDSKFLGVLYGLGHPYKAGG 270
BLAST of Gcaud7262.t1 vs. uniprot
Match: F4Q733_CAVFA (Poly(A)-specific ribonuclease n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q733_CAVFA) HSP 1 Score: 293 bits (750), Expect = 3.630e-94 Identity = 144/254 (56.69%), Postives = 181/254 (71.26%), Query Frame = 0
Query: 4 TSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNC-GILYNL 256
T IR+VWA NLE+E+ + +L D YN+IAMDTEFPG+V RP+GS T D Y T RLNVDLLKIIQLG++ + DG TWQFNF F+L+ DMYAQDSI+LL SGI+F ++E+NGIDVL FG+L+ SSG+VLN ++ WI F GYDF YLIK+LT LP++E FF+ + +FP IYD+KYL S L GGL+++AE L +R G HQAGSDSLLT FFK+++ F IDDS GILY L
Sbjct: 11 TDEIREVWAHNLEEEMALIRELVDDYNYIAMDTEFPGIVTRPVGSFRTPSDYHYQTLRLNVDLLKIIQLGLTFSDSDGNLASNTCTWQFNFKFNLNEDMYAQDSIDLLSRSGIEFKKNEENGIDVLDFGDLLMSSGIVLNEKIKWISFHSGYDFGYLIKVLTCTALPQEEPEFFDLVRTYFPCIYDIKYLMKSCKNLKGGLSELAEDLDIKRIGPQHQAGSDSLLTCTTFFKLRKMYFENQIDDSKYQGILYGL 264
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A5M3MQ76_CONPW (Poly(A)-specific ribonuclease n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MQ76_CONPW) HSP 1 Score: 292 bits (747), Expect = 3.840e-94 Identity = 149/259 (57.53%), Postives = 179/259 (69.11%), Query Frame = 0
Query: 5 SRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMTTKS 262
SRIR VW+ NLE E+ + DL D Y +IAMDTEFPGVV RPIGS T D Y T R NVDLL+IIQ+GI+LA E+G P++ TWQFNF FSL+ DMYA +SIELL+ SG DFA HE+ GID F EL+ +SGLVLNP V W+ F GYDF Y +KLLTA LP E FF+ L+++FP +YD+K++ + L GGL +A+ LG R GT HQAGSDSLLT VFFKM+E F IDD G LY LG T S
Sbjct: 2 SRIRDVWSVNLEAEMRTIRDLVDSYPYIAMDTEFPGVVARPIGSFKTSSDYHYQTMRCNVDLLRIIQVGITLADEEGSFPQDAATWQFNFRFSLATDMYAPESIELLQKSGFDFARHEEYGIDPNDFAELMITSGLVLNPDVKWLSFHSGYDFGYYVKLLTAQSLPSAEDVFFDELNMWFPHVYDIKFMMRACKSLKGGLQDIADDLGVLRIGTSHQAGSDSLLTASVFFKMRELFFEDQIDDDEYSGKLYGLGQTFTS 260
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A4P9Z628_9FUNG (Poly(A)-specific ribonuclease n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z628_9FUNG) HSP 1 Score: 287 bits (734), Expect = 7.200e-94 Identity = 145/248 (58.47%), Postives = 170/248 (68.55%), Query Frame = 0
Query: 1 MARTSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDS 248
M + IR+VWA NLE E+ L DL + Y ++AMDTEFPGVV RPIGS T D Y T R NVDLLKIIQLG++ A E G+ P TWQF+F FSL++DMYAQDSI+LL SGIDF HE+ GIDV FGEL+ SSG VL V WI F GYDF YL+K+LT PLP +E GFF L L+FP IYD+KYL S L GGL VA+ L +R G HQAGSDSLLT FFKM++ F IDD+
Sbjct: 3 MQESKYIREVWADNLESEMALLRDLVEHYPYLAMDTEFPGVVARPIGSFRTASDYHYQTLRCNVDLLKIIQLGLTFANEQGEMPPGAATWQFHFKFSLADDMYAQDSIDLLAKSGIDFKRHEERGIDVHLFGELLISSGFVLTRDVRWISFHSGYDFGYLLKVLTCSPLPAEEVGFFSLLHLYFPCIYDIKYLMKSCKNLKGGLQDVADDLQVQRVGPQHQAGSDSLLTCTTFFKMRQMFFADQIDDA 250
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A139AW06_GONPJ (Poly(A)-specific ribonuclease n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AW06_GONPJ) HSP 1 Score: 288 bits (738), Expect = 7.460e-94 Identity = 147/254 (57.87%), Postives = 178/254 (70.08%), Query Frame = 0
Query: 7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMT 259
IR VWASNLE+E+ + D+ + Y +IAMDTEFPGVV RPIG+ T D Y T R NVDLL++IQLG++ A E+G PE TWQFNF F+L +DMYAQDSI+LL SGIDF HE+ GIDV FGEL+T+SGLVL V WI F GYDF YL+K+LT+ LP +EA FFE L ++FP IYD+KYL S L GGL VA+ L +R G HQAGSD+LLT FFKM++ F IDD+ G LY LG T
Sbjct: 8 IRDVWASNLEEEMAAIRDMVEKYPYIAMDTEFPGVVARPIGTFKTSADYHYQTLRCNVDLLRLIQLGVTCADEEGNLPEGVCTWQFNFKFNLQDDMYAQDSIDLLTKSGIDFKRHEEYGIDVDHFGELLTTSGLVLFDDVKWISFHSGYDFGYLLKVLTSQTLPAEEADFFELLRMYFPCIYDIKYLMKSCKNLKGGLQDVADELQVQRIGPQHQAGSDALLTCRTFFKMRQLFFEDNIDDARFLGFLYGLGGT 261 The following BLAST results are available for this feature:
BLAST of Gcaud7262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7262.t1 ID=Gcaud7262.t1|Name=Gcaud7262.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=302bpback to top |