Gcaud726.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud726.t1
Unique NameGcaud726.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length107
Homology
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BLAST of Gcaud726.t1 vs. uniprot
Match: A0A2V3IXF9_9FLOR (Hemolysin, chromosomal n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF9_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 1.250e-26
Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 0 
Query:    3 LVPKAENGASKGFIAFVDDPGLNGAVIKETIAPGEDSNVVSMSNYLSGAGTSFAGLMANLPKTVSDMTNDINNASLFRYFQLEDNIKKHSGELSKVIKE 101
            L PK+  G  +GFIAFVDDPGL G V+K T++   +S+++SMSNYLSGAGTSF G MA+LP+ VSDM     +ASLFRY +LE  ++   G+L+KVI E
Sbjct:   99 LAPKSAAGKGRGFIAFVDDPGLKGGVLKGTVSGDGESDLISMSNYLSGAGTSFGGFMADLPQNVSDMFEKSVDASLFRYMKLEGKLETSKGKLAKVIAE 197
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BLAST of Gcaud726.t1 vs. uniprot
Match: A0A2V3IV59_9FLOR (Iron-regulated protein FrpA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV59_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 1.080e-15
Identity = 41/104 (39.42%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:    3 LVPKAENGASKGFIAFVDDPGLNGAVIKETIAPGEDSNVVSMSNYLSGAGTSFAGLMANLPKTVSDMTNDINNASLFRYFQLEDNIKKHSGELSKVIKEHEDYV 106
            LVP AE+    G IA         ++I   ++   +++V+ +SN+LSGAGTS  G + +LP+ +SDM N I NA+LFRY +L++ +   +G+LS++I+++E YV
Sbjct:   97 LVPTAEDSEESGGIA---------SIITGQVSENGETDVIRLSNHLSGAGTSMGGFLMDLPQNISDMVNGITNATLFRYTKLQEQLDSVAGDLSRIIEQNEYYV 191
The following BLAST results are available for this feature:
BLAST of Gcaud726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXF9_9FLOR1.250e-2656.57Hemolysin, chromosomal n=1 Tax=Gracilariopsis chor... [more]
A0A2V3IV59_9FLOR1.080e-1539.42Iron-regulated protein FrpA n=1 Tax=Gracilariopsis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10422_length_547_cov_8.320175contigNODE_10422_length_547_cov_8.320175:91..410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud726.t1Gcaud726.t1Gracilaria caudata M_176_S67 malemRNANODE_10422_length_547_cov_8.320175 91..410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud726.t1 ID=Gcaud726.t1|Name=Gcaud726.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=107bp
MKLVPKAENGASKGFIAFVDDPGLNGAVIKETIAPGEDSNVVSMSNYLSG
AGTSFAGLMANLPKTVSDMTNDINNASLFRYFQLEDNIKKHSGELSKVIK
EHEDYVX
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