Gcaud7245.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7245.t1
Unique NameGcaud7245.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length275
Homology
BLAST of Gcaud7245.t1 vs. uniprot
Match: A0A2V3IYA5_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA5_9FLOR)

HSP 1 Score: 362 bits (929), Expect = 1.880e-124
Identity = 179/219 (81.74%), Postives = 199/219 (90.87%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDGVTILDAADSTTPGKQTDVMVTEAPIQTATA 269
            MESVIALEGDGFV+IAADVSNARSIVVMKDDVDKIR LDD KLFAAVG PGDVSKF EHIQKDV+LYNMRSGIT+STAAMANYTRGELARFLRRSPFQCN++MAGYD  PNG G SLY+CDYLGTL KL+FAAEGYAQYFVLSTLDRYWKKN+SV++GL +I+KCIAE+Q R V+SQ RF+IK+V KDGV +L+AADSTTPGK+ D M TEAP QT +A
Sbjct:    1 MESVIALEGDGFVIIAADVSNARSIVVMKDDVDKIRVLDDHKLFAAVGDPGDVSKFFEHIQKDVKLYNMRSGITISTAAMANYTRGELARFLRRSPFQCNVVMAGYDPAPNGAGPSLYTCDYLGTLAKLKFAAEGYAQYFVLSTLDRYWKKNMSVEDGLAVIKKCIAEVQTRFVVSQRRFAIKVVSKDGVKVLEAADSTTPGKKMDAMETEAPAQTVSA 219          
BLAST of Gcaud7245.t1 vs. uniprot
Match: Q7XY60_GRIJA (Proteasome subunit beta (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY60_GRIJA)

HSP 1 Score: 281 bits (718), Expect = 7.660e-93
Identity = 134/173 (77.46%), Postives = 155/173 (89.60%), Query Frame = 0
Query:   53 SVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVI 225
            S+IAL+G  +V+IAADVS ARSIVVMKDD+DKIR LD+ KLFAA G+PGDV+KF EH+QKDV+LY++RSGI+MSTAA+ANYTRGELA FLRRSPFQCN+++ GYD  PNG G SLYSCDYLGTL KL FAAEGYAQYFVLSTLDRYWKK +S+DEGL  IRKCIAE+QKRLV+
Sbjct:    4 SIIALQGADYVLIAADVSCARSIVVMKDDMDKIRQLDEGKLFAAAGVPGDVTKFSEHVQKDVRLYSLRSGISMSTAAVANYTRGELAHFLRRSPFQCNVIIGGYDKAPNGDGPSLYSCDYLGTLTKLTFAAEGYAQYFVLSTLDRYWKKGMSLDEGLDAIRKCIAEVQKRLVL 176          
BLAST of Gcaud7245.t1 vs. uniprot
Match: UPI001E1D5515 (proteasome subunit beta type-2-B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5515)

HSP 1 Score: 277 bits (708), Expect = 8.340e-91
Identity = 137/201 (68.16%), Postives = 167/201 (83.08%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGA----SLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDGVTILDAAD 247
            MES+IALEGDGFVMIAADV+NARS+VVMKDD+DKI+ LDD KL AA G PGDVSKF EH+ KD++LY +RSG+ MSTAA A+YTRGELA+FLR++P+QCN+L+AG+D      G     +LYS DYLGT+ KLRF AEGYAQYFVLSTLDRYWKKNLS  + L ++ + IAE+QKRLVI+QPRF IK+V K+GV +L +AD
Sbjct:    1 MESLIALEGDGFVMIAADVTNARSVVVMKDDMDKIQVLDDHKLLAAAGSPGDVSKFTEHVTKDLRLYRLRSGMQMSTAATAHYTRGELAKFLRKAPYQCNLLLAGFDKEQEISGTPCSTALYSIDYLGTMHKLRFCAEGYAQYFVLSTLDRYWKKNLSEKDALVVLGQAIAEVQKRLVINQPRFCIKIVDKNGVRVLRSAD 201          
BLAST of Gcaud7245.t1 vs. uniprot
Match: A0A5J4YZT1_PORPP (Proteasome subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZT1_PORPP)

HSP 1 Score: 212 bits (539), Expect = 1.280e-65
Identity = 101/190 (53.16%), Postives = 143/190 (75.26%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDGV 240
            M+S+IAL GDGFVM AAD++NARSIVVMK+D+DKI  LD  +L    G PGDV++F E++QK+V LY +R+G++ ST A+AN+TR ELA+ LR++P+  N+L+ GYD      G  ++  DYLGTL K+ F+A+GY  YF+L+TLDRY+K N+S  E L+++RK I E++ R +I QP F IK+V K+G+
Sbjct:    1 MDSIIALTGDGFVMCAADMTNARSIVVMKEDMDKIMELDRHRLLCMAGEPGDVAQFTEYVQKNVHLYQLRTGVSQSTRAIANFTRNELAKSLRKNPYSVNLLLGGYD---QHDGPEVFYLDYLGTLHKMPFSAQGYCAYFILATLDRYYKPNMSEQEALEVMRKAIDEVRIRFLIKQPDFLIKVVDKNGI 187          
BLAST of Gcaud7245.t1 vs. uniprot
Match: M2X5G7_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X5G7_GALSU)

HSP 1 Score: 201 bits (512), Expect = 1.600e-61
Identity = 97/190 (51.05%), Postives = 139/190 (73.16%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDGV 240
            M+SVIAL G  FV+ AAD SNARS++VMKDDVDKI  LD  K  A  G PGD  +F E+IQK++ LY  ++G+ +ST A+AN+ RGELAR +R +P   N+L+ G+D      G  LY  DYLGTL KL + A+GYA +F+L TLDRY++K++++++G++++++CI ++ KR VI+Q  F +K+V KDGV
Sbjct:    1 MDSVIALVGKDFVLSAADTSNARSVIVMKDDVDKIMELDSHKTLAMGGEPGDFVQFTEYIQKNLHLYEFQTGLQLSTHAVANFIRGELARLIREAPVLANLLLGGFDEV---SGPCLYYIDYLGTLEKLDYTAQGYASFFILGTLDRYYQKDITLEQGIELMKRCIQQLGKRFVINQRNFIMKVVDKDGV 187          
BLAST of Gcaud7245.t1 vs. uniprot
Match: PSB2B_ARATH (Proteasome subunit beta type-2-B n=43 Tax=Brassicales TaxID=3699 RepID=PSB2B_ARATH)

HSP 1 Score: 194 bits (494), Expect = 1.010e-58
Identity = 100/189 (52.91%), Postives = 132/189 (69.84%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDG 239
            ME V  L G+GF ++AAD S   SI++ K+  DKI  LD  KL AA G PGD  +F E++QK+V LY  R+GI +STAA AN+TRGELA  LR++P+  NILMAGYD      GASLY  DY+ TL K+   A GY  YF LST+DR+++ ++SV+E ++++ KCI EI+ RLVI+ P F IK+V KDG
Sbjct:    1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEA---GASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKDG 186          
BLAST of Gcaud7245.t1 vs. uniprot
Match: PSB2A_ARATH (Proteasome subunit beta type-2-A n=10 Tax=Brassicaceae TaxID=3700 RepID=PSB2A_ARATH)

HSP 1 Score: 194 bits (494), Expect = 1.190e-58
Identity = 98/189 (51.85%), Postives = 134/189 (70.90%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDG 239
            ME V  L G+GF ++AAD S   SI++ K++ DKI  LD  KL AA G PGD  +F E++QK+V LY  R+GI ++TAA AN+TRGELA  LR++P+  NILMAGYD   +  GASLY  DY+ TL K+   A GY  YF LST+DR+++ ++SV+E ++++ KCI EI+ RLV++ P F IK+V KDG
Sbjct:    1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYD---DESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDG 186          
BLAST of Gcaud7245.t1 vs. uniprot
Match: A0A078FBA3_BRANA (Proteasome subunit beta n=10 Tax=Brassiceae TaxID=981071 RepID=A0A078FBA3_BRANA)

HSP 1 Score: 194 bits (492), Expect = 2.380e-58
Identity = 98/189 (51.85%), Postives = 133/189 (70.37%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDG 239
            ME V  L G GF ++AAD S   SI++ K++ DKI  LD  KL AA G PGD  +F E++QK+V LY  R+GI ++TAA AN+TRGELA  LR++P+  NILMAGYD      GASLY  DY+ TL K+   A GY  YF LST+DR++++++SV+E ++++ KCI EI+ RLV++ P F IK+V KDG
Sbjct:    1 MECVFGLVGKGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDEE---SGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYREDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDG 186          
BLAST of Gcaud7245.t1 vs. uniprot
Match: A0A7S3H6V1_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6V1_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.260e-58
Identity = 94/193 (48.70%), Postives = 130/193 (67.36%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDGVTIL 243
            M+SV AL GDG+ ++AAD S ARSI+V K D DKI  LD  KL    G+P D + F E+IQ+++ LY + + I +ST   ANY RGELA  LR+ P+Q N+L+AGYDA     G SLY  DY+ +L K+ F A GYA  F+LS  DR WKK +++ EGL+++R+CI E++ R +ISQP F +K+V   G  ++
Sbjct:    1 MDSVFALVGDGYAIVAADASAARSILVFKHDEDKIMELDSHKLLVGAGVPADCAHFNEYIQRNLTLYELNNDIKLSTHGSANYIRGELATALRKGPYQSNLLLAGYDAQD---GVSLYHMDYMASLSKVNFGAHGYAANFILSVFDRDWKKGMNLQEGLEVVRRCIHELRTRFLISQPVFILKVVDAAGTRVV 190          
BLAST of Gcaud7245.t1 vs. uniprot
Match: A0A6J1KI50_CUCMA (Proteasome subunit beta n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1KI50_CUCMA)

HSP 1 Score: 192 bits (488), Expect = 9.560e-58
Identity = 99/189 (52.38%), Postives = 128/189 (67.72%), Query Frame = 0
Query:   51 MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIPGDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCNILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWKKNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDG 239
            ME V  L G+GF ++AAD S   SI+V K D DKI  LD  KL AA G PGD  +F E+IQK+V LY  R+GI ++TAA AN+TRGELA  LR++P+  NIL+AGYD      G SLY  DY+ TL K+   A GY  YF LS +DR++   +SVDE ++++ KCI EI+ RLV++ P F IK+V KDG
Sbjct:    1 MECVFGLVGNGFAIVAADSSAVHSILVHKSDEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKE---SGPSLYYIDYIATLHKVEKGAFGYGSYFSLSMMDRHYHSGMSVDEAIELVDKCIVEIRSRLVVAPPNFVIKIVDKDG 186          
The following BLAST results are available for this feature:
BLAST of Gcaud7245.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYA5_9FLOR1.880e-12481.74Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
Q7XY60_GRIJA7.660e-9377.46Proteasome subunit beta (Fragment) n=1 Tax=Griffit... [more]
UPI001E1D55158.340e-9168.16proteasome subunit beta type-2-B-like n=1 Tax=Merc... [more]
A0A5J4YZT1_PORPP1.280e-6553.16Proteasome subunit beta n=1 Tax=Porphyridium purpu... [more]
M2X5G7_GALSU1.600e-6151.05Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
PSB2B_ARATH1.010e-5852.91Proteasome subunit beta type-2-B n=43 Tax=Brassica... [more]
PSB2A_ARATH1.190e-5851.85Proteasome subunit beta type-2-A n=10 Tax=Brassica... [more]
A0A078FBA3_BRANA2.380e-5851.85Proteasome subunit beta n=10 Tax=Brassiceae TaxID=... [more]
A0A7S3H6V1_9STRA3.260e-5848.70Proteasome subunit beta n=1 Tax=Spumella elongata ... [more]
A0A6J1KI50_CUCMA9.560e-5852.38Proteasome subunit beta n=5 Tax=Cucurbitaceae TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 53..233
e-value: 1.8E-34
score: 118.9
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 51..250
e-value: 6.9E-44
score: 151.7
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 50..247
IPR035206Proteasome subunit beta 2PANTHERPTHR11599:SF6PROTEASOME SUBUNIT BETA TYPE-2coord: 51..239
IPR035206Proteasome subunit beta 2CDDcd03758proteasome_beta_type_2coord: 51..244
e-value: 3.7175E-92
score: 268.684
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 51..239
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 55..102
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 51..235
score: 27.368851

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_86_length_54060_cov_4.498935contigNODE_86_length_54060_cov_4.498935:13688..14603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7245.t1Gcaud7245.t1Gracilaria caudata M_176_S67 malemRNANODE_86_length_54060_cov_4.498935 13688..14603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7245.t1 ID=Gcaud7245.t1|Name=Gcaud7245.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=275bp
LTSWSWQLIVKGTSILIFVYLDLHFESRFVHINCDLLRDLRNKKFLQSFI
MESVIALEGDGFVMIAADVSNARSIVVMKDDVDKIRALDDQKLFAAVGIP
GDVSKFCEHIQKDVQLYNMRSGITMSTAAMANYTRGELARFLRRSPFQCN
ILMAGYDAPPNGKGASLYSCDYLGTLVKLRFAAEGYAQYFVLSTLDRYWK
KNLSVDEGLQIIRKCIAEIQKRLVISQPRFSIKMVGKDGVTILDAADSTT
PGKQTDVMVTEAPIQTATAQEATA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR035206Proteasome_beta2
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type