Gcaud7218.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7218.t1
Unique NameGcaud7218.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length124
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 66..89
e-value: 8.1E-4
score: 28.7
coord: 95..118
e-value: 0.38
score: 19.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 66..89
e-value: 2.5E-5
score: 24.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 97..118
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 68..89
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 95..123
score: 9.701866
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 66..94
score: 13.234995
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 64..91
e-value: 1.6E-10
score: 42.7
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 92..119
e-value: 3.8E-5
score: 25.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availablePANTHERPTHR24390:SF142IP01005Pcoord: 51..119
NoneNo IPR availablePANTHERPTHR24390ZINC FINGER PROTEINcoord: 51..119
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 64..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1491_length_10244_cov_4.428445contigNODE_1491_length_10244_cov_4.428445:430..1695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7218.t1Gcaud7218.t1Gracilaria caudata M_176_S67 malemRNANODE_1491_length_10244_cov_4.428445 430..1695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7218.t1 ID=Gcaud7218.t1|Name=Gcaud7218.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=124bp
XAHASLLSSHSKSADNNNSARPPPSTAVPSASNSQVNGVASSSAARPAAA
QHASTSKKTAPVTKSFPCDKCSATFAQKGQLSRHIRRVHDKLRPHACEYC
GRLFGARSDRTRHVMIVHKKLNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf