Gcaud7199.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7199.t1
Unique NameGcaud7199.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length238
Homology
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A2V3IFI8_9FLOR (Homologous-pairing protein 2 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFI8_9FLOR)

HSP 1 Score: 276 bits (707), Expect = 4.950e-91
Identity = 170/236 (72.03%), Postives = 193/236 (81.78%), Query Frame = 0
Query:    1 MGKGRKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDFPEMKNPAKR---NGVSVGHRSK 233
            M K +KAS++EEVV  FLKA+NRPFSVQNIVDSLQK+G+KK A ERSLASLVEKKLVTKKEYGKAKIFIAAQ +IDIP  +EV  LD      XXXXXXXXXXXXX          ELT+ EAK++V +L E TE+K+EKL SLGDGS+L+SKEDK KLELSYYQ RS WKKY+RIVTDITDA+GEASGKKR+ELFEELAIESDEAA VKLSDFPE+ NPAKR   + VS+  R+K
Sbjct:    1 MTKAKKASEDEEVVLNFLKARNRPFSVQNIVDSLQKAGIKKAAAERSLASLVEKKLVTKKEYGKAKIFIAAQGLIDIPSQEEVNELDEXXXXXXXXXXXXXXXXXXLSKNANTLRSELTLEEAKERVAQLNEATEQKEEKLRSLGDGSTLMSKEDKQKLELSYYQARSLWKKYRRIVTDITDAIGEASGKKRSELFEELAIESDEAANVKLSDFPEIANPAKRQKRSPVSIQKRAK 236          
BLAST of Gcaud7199.t1 vs. uniprot
Match: R7QFE6_CHOCR (Homologous-pairing protein 2 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFE6_CHOCR)

HSP 1 Score: 230 bits (587), Expect = 8.830e-73
Identity = 123/220 (55.91%), Postives = 156/220 (70.91%), Query Frame = 0
Query:    5 RKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDFPEMKNPAKRN 224
            +KASDEE++V+ FL  +NRPFSVQNIVD+LQK+GVKKTAVERSLASLVEK LV KKEYGKAKIFI AQD I++PDP+EV RLD ++  +                       + T+ +AK Q E+LT     K  K   LGDGS L++ EDK KLE  YY  R+ WKKYKRIVTDI + +GEA+GKK +ELFE++ IE+DE+  +K+SDFP+++NP K N
Sbjct:    6 QKASDEEDIVYTFLSKENRPFSVQNIVDALQKNGVKKTAVERSLASLVEKGLVKKKEYGKAKIFILAQDKIELPDPEEVTRLDEELKSMLAEVSDLTERNDNLQSTVNMLKSQYTLEQAKVQDEKLTNVLAEKDAKRADLGDGSKLMTTEDKLKLEKDYYNVRALWKKYKRIVTDIVNQIGEATGKKNSELFEDMGIETDESVNIKISDFPDIQNPLKAN 225          
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A7S1TM18_9RHOD (Homologous-pairing protein 2 homolog n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TM18_9RHOD)

HSP 1 Score: 166 bits (421), Expect = 1.130e-47
Identity = 92/214 (42.99%), Postives = 134/214 (62.62%), Query Frame = 0
Query:   10 EEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDFPEMKNPAKR 223
            EE++V ++L+ QNRPFSVQNIVD+LQK GVKKTA+ER+LA LV+ +  T KEYGKAKI+I  Q  I+IP  DE+  +D++IA                         ELT  +A + ++E  E  ER + KL  LGD ++L++KE+   +EL+ ++ +++WK+ KR+V D  D + E   KKR  L +EL +E DE AGV ++D P   +P K+
Sbjct:   14 EEQIVLRYLEQQNRPFSVQNIVDALQKDGVKKTAIERALAELVQNEKATCKEYGKAKIYIFGQSAIEIPPADELAAMDAEIARKAAELKSIDAEVSAQRQLNAALQSELTEEKAAELIKENKEIIERHKVKLEGLGDSANLLTKEEMQSIELALFKAKNEWKRRKRVVIDCLDQISEQMNKKRKVLADELGVEDDEEAGVDINDLPAATDPTKQ 227          
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A5J4Z299_PORPP (Homologous-pairing protein 2-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z299_PORPP)

HSP 1 Score: 150 bits (378), Expect = 2.050e-39
Identity = 88/219 (40.18%), Postives = 127/219 (57.99%), Query Frame = 0
Query:    4 GRKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDFPEMKNPAK 222
            G+KA D   VV K+++AQNRPFSVQN+VD+LQK GVKK  VE +LA+LVE   V  KEYGKAKI++AAQ  I++P P+E+  +D QI                          ++T  EA++++ +L  +      KL  LGD ++LIS E    + +  ++ ++ WKK +R  TDI +   E+  KK + L EEL +E DE  GV L + P  ++P K
Sbjct:  184 GKKADDATTVVAKYMEAQNRPFSVQNVVDALQKDGVKKKGVETALAALVEDGAVMVKEYGKAKIYLAAQQAIELPSPEEMHAIDEQIKAKDAELKALVKSSEEQHRVNAALKSQMTEQEARQELLKLEADAHDMHAKLDKLGDPANLISAEQMQAVGVKLFKAKALWKKRRRQATDIVETFCESMNKKPSVLCEELCVERDEDVGVALQNVPNGEDPTK 402          
BLAST of Gcaud7199.t1 vs. uniprot
Match: M2XCS2_GALSU (Homologous-pairing protein 2 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XCS2_GALSU)

HSP 1 Score: 141 bits (356), Expect = 5.010e-38
Identity = 83/212 (39.15%), Postives = 123/212 (58.02%), Query Frame = 0
Query:    3 KGRKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDF 214
            K   A  EEE+V +FL+ QNRPFSVQNIVD+LQK G+KK   E+ L+SLVEK++V+ KEYGKAKI++  QD I+IP+  EV+ +D ++                          ++TV EA+ + +EL    ++  EKL  L  G   I  E++ KL+ +     S WK+ KR+  DI DA+ E +  K  EL E++ +E+DE  G+ + + 
Sbjct:    5 KSSNAFAEEEIVMRFLEKQNRPFSVQNIVDALQKDGIKKALCEKILSSLVEKEVVSVKEYGKAKIYLFRQDTIEIPEQKEVEEMDEELRLKEEEYASITTEISELEKEVNYLSSQMTVEEARNKRDELESTLQQMNEKLQVLSAGIQQIDPEERKKLQQNLLYNVSNWKQRKRMAKDILDAISENANLKYKELCEQIGVETDETVGLDMENI 216          
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A2R6XGX7_MARPO (Homologous-pairing protein 2 homolog n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XGX7_MARPO)

HSP 1 Score: 126 bits (317), Expect = 2.790e-32
Identity = 75/209 (35.89%), Postives = 116/209 (55.50%), Query Frame = 0
Query:    6 KASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDF 214
            K S  E +V  F+  QNRP + QN+ D+LQK G+KK +VE+ L++L +K  ++ KEYGK KI++A QD  ++P+ +E+ R+  +  +L                        LT  + K ++E+L  E    + KL +L  G++LI+ E+K K+E +Y      W+K KR+  D+ D + EA  K   EL EEL IE DE  G K+ D+
Sbjct:    4 KLSTNEGIVLDFINEQNRPLNAQNVADALQKHGIKKVSVEKILSTLGDKGQISFKEYGKQKIYLARQDQFEVPNAEELDRMRKENEQLQREINSSKTLISELEAELRSVQSNLTDKQIKLEMEKLNNEIPSLEAKLSTLKSGATLITSEEKEKIESAYTLKTGLWRKRKRMFKDLWDMITEAVPKNLTELKEELGIELDEDVGQKIEDY 212          
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A6T6AXK2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AXK2_9RHOD)

HSP 1 Score: 124 bits (312), Expect = 3.510e-32
Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 0
Query:    4 GRKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSY 163
            G+K SDEE VV  +L+ +NRPFSVQNIVD+LQK GVKKTA ER+LASLVE   V  KEYGKAK+++  QD ID+PD D +  +D +IAE                         L+  EA ++ + L E  ER   KL +LGD S+L+S+E+K + +  Y
Sbjct:    7 GKKGSDEESVVEAYLEEKNRPFSVQNIVDALQKDGVKKTACERALASLVEGGKVVCKEYGKAKLYLFRQDNIDVPDGDSLAEMDREIAEKVGQTKELAARCGEEEGEVNALKSTLSEEEAAQRRKSLAESVERLNTKLQALGDISNLVSREEKQREDAKY 166          
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A7J7LWZ4_9MAGN (Homologous-pairing protein 2 homolog n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LWZ4_9MAGN)

HSP 1 Score: 122 bits (305), Expect = 1.570e-30
Identity = 78/220 (35.45%), Postives = 113/220 (51.36%), Query Frame = 0
Query:    6 KASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKLSDFPEMKNPAKRNG 225
            K+ + E +V  F+  QNRP + QN+ D+LQK  +KKT V++SL  L +   ++ KEYGK KI++A QD+  IP   +++++    A L                        LT+            E E+ +EKL  L DG SL+  ED+  +E  + +  SQWKK KR+  D+ D + E S K   E  EEL IE DE AGV L+ F E+    K+ G
Sbjct:    4 KSDNGEGIVLNFVNEQNRPLNAQNVADALQKFNLKKTGVQKSLDCLADAAKISFKEYGKQKIYMARQDLFQIPTTQDLEQMKKLNATLQLELEDQKRVTTQIEGEIRALHSNLTLXXXXXXXXXXXXEVEKMEEKLNKLRDGISLVRPEDRKLIEGMFEEKISQWKKRKRMFKDLWDTITENSPKDVKEFKEELGIEYDEDAGVSLASFIELAPQGKKRG 223          
BLAST of Gcaud7199.t1 vs. uniprot
Match: C3ZHE3_BRAFL (Homologous-pairing protein 2 homolog n=2 Tax=Branchiostoma TaxID=7737 RepID=C3ZHE3_BRAFL)

HSP 1 Score: 114 bits (284), Expect = 1.430e-27
Identity = 74/211 (35.07%), Postives = 112/211 (53.08%), Query Frame = 0
Query:    1 MGKGRKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKL 211
            M K ++A+    V+  +LK QNRP+S  ++  +L K    KTAV R L  L +K  + +K YGK K++ A Q +       E+K +D QI+EL                        +T  EAK Q+ ELT++  + QEKL  L  G   I+KE+K K+   +     QW+K KR+ T++ DA+ E   K++ +LFEE+ IE+DE   VK+
Sbjct:    1 MSKSKEAAAASAVLE-YLKKQNRPYSATDVFSNLHKE-YGKTAVTRVLEELAQKGKIKEKVYGKQKVYCADQSVFPDVKDTEMKDMDQQISELTDKVRNTQAACKGRETELRDLTSSITTQEAKAQLAELTKKCSQYQEKLDKLKSGGKTITKEEKEKVYKEHEAMVKQWRKRKRMATEMLDAILEGYPKRKKDLFEEIGIETDEECNVKI 209          
BLAST of Gcaud7199.t1 vs. uniprot
Match: A0A6A4X7W2_AMPAM (Homologous-pairing protein 2 homolog n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4X7W2_AMPAM)

HSP 1 Score: 112 bits (279), Expect = 6.960e-27
Identity = 69/198 (34.85%), Postives = 116/198 (58.59%), Query Frame = 0
Query:   14 VHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLASLVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELXXXXXXXXXXXXXXXXXXXXXXXELTVGEAKKQVEELTEETERKQEKLGSLGDGSSLISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELAIESDEAAGVKL 211
            V K+L  QNRP+SV +I  +L K    KTAV++SL +LVE+K V +K YGK K+++  Q++    +  E+K +D++IAEL                        LT  +AK+++++  ++   + EKL +L   S  ++ E++ +++  + +  ++W+K KRI TDI DA+ E   KK+ +L EE+ +E+DE AGV L
Sbjct:    9 VFKYLHDQNRPYSVTDIHMNLHKE-YGKTAVQKSLDALVEEKKVMEKVYGKQKVYVVNQELFPKAEEAEIKGMDAKIAELTAQLAEEAAAARELEARLKATTNSLTSEQAKRELKQCEQDVASRTEKLAALKRLSDNVTAEERRRVQERHRRLVTEWRKRKRIATDIVDAIMEGYPKKKKDLLEEIGLETDEEAGVTL 205          
The following BLAST results are available for this feature:
BLAST of Gcaud7199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFI8_9FLOR4.950e-9172.03Homologous-pairing protein 2 homolog n=1 Tax=Graci... [more]
R7QFE6_CHOCR8.830e-7355.91Homologous-pairing protein 2 homolog n=1 Tax=Chond... [more]
A0A7S1TM18_9RHOD1.130e-4742.99Homologous-pairing protein 2 homolog n=1 Tax=Eryth... [more]
A0A5J4Z299_PORPP2.050e-3940.18Homologous-pairing protein 2-like n=1 Tax=Porphyri... [more]
M2XCS2_GALSU5.010e-3839.15Homologous-pairing protein 2 homolog n=1 Tax=Galdi... [more]
A0A2R6XGX7_MARPO2.790e-3235.89Homologous-pairing protein 2 homolog n=2 Tax=March... [more]
A0A6T6AXK2_9RHOD3.510e-3246.25Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J7LWZ4_9MAGN1.570e-3035.45Homologous-pairing protein 2 homolog n=1 Tax=Kingd... [more]
C3ZHE3_BRAFL1.430e-2735.07Homologous-pairing protein 2 homolog n=2 Tax=Branc... [more]
A0A6A4X7W2_AMPAM6.960e-2734.85Homologous-pairing protein 2 homolog n=3 Tax=Amphi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..110
NoneNo IPR availableCOILSCoilCoilcoord: 113..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..237
IPR040661Leucine zipper with capping helix domainPFAMPF18517LZ3wCHcoord: 153..207
e-value: 6.9E-7
score: 29.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..79
e-value: 3.6E-22
score: 80.1
IPR010776Homologous-pairing protein 2, winged helix domainPFAMPF07106TBPIPcoord: 9..70
e-value: 3.7E-20
score: 71.6
IPR040461Homologous-pairing protein 2PANTHERPTHR15938TBP-1 INTERACTING PROTEINcoord: 4..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_651_length_20246_cov_4.368345contigNODE_651_length_20246_cov_4.368345:15459..16172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7199.t1Gcaud7199.t1Gracilaria caudata M_176_S67 malemRNANODE_651_length_20246_cov_4.368345 15459..16172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7199.t1 ID=Gcaud7199.t1|Name=Gcaud7199.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=238bp
MGKGRKASDEEEVVHKFLKAQNRPFSVQNIVDSLQKSGVKKTAVERSLAS
LVEKKLVTKKEYGKAKIFIAAQDIIDIPDPDEVKRLDSQIAELEEQLSSI
SKAADQLSATVSRLRAELTVGEAKKQVEELTEETERKQEKLGSLGDGSSL
ISKEDKTKLELSYYQCRSQWKKYKRIVTDITDAVGEASGKKRAELFEELA
IESDEAAGVKLSDFPEMKNPAKRNGVSVGHRSKKPKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040661LZ3wCH
IPR036388WH-like_DNA-bd_sf
IPR010776Hop2_WH_dom
IPR040461Hop2