Gcaud7195.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7195.t1
Unique NameGcaud7195.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length342
Homology
BLAST of Gcaud7195.t1 vs. uniprot
Match: A0A2V3IFL3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFL3_9FLOR)

HSP 1 Score: 438 bits (1126), Expect = 2.070e-151
Identity = 214/322 (66.46%), Postives = 258/322 (80.12%), Query Frame = 0
Query:   20 LSSSEKSGIQSSASFAQSTWRERLSLCYTLPHLAAFLSVLTLCVVIACRLREESHRQQEAAHLAERCAFAYVASVNHTNLKNLGHSLESFNRHIGQLTYKLLVLHDGLPPVEQGKLQSLSEAPVLFRPLQQTLNRTITHITLETTHNRTRFWSYLALRQNDFLSDIDFLIRLEPHAVFSSKVKFDFVRSFVANGMQYAYPSLGRECSPNVTNSLRELASSYVELNGIRPRNEQLWNAILKTKTNPCMPVFSNHFEIINLRFFRTHSGVQDWIRVVETHGGVYQYGWYDSLLRYATVALYAAPSKTIRYGPDRVPFKPFMSEK 341
            L++S +S  ++S SF+ STWRER+SLCYTLPHLAA LS+LTL +V+  RLR E++R +EAA LAERC F Y+ SVNHT+L +LGHSL+SFN H   L YK+L+LHDGLPPV+QGKLQSLSEAP+ FR LQ  +NRT  +I+L+   N   FWSYLALRQND+L DIDFLIRLEP AVF+ +++ DFV SFVA+G+QYAYPSL R+CSPNVT SL+ELA SYV LNGI+PRN  LWN IL +    C+P F+NHFEIINLRFFRTHSG+QDWIR +ETHGG++  GW+D LLRY TVALYAAPSKT +YG DRVP  P    K
Sbjct:   21 LTASHQSSEETSISFSPSTWRERVSLCYTLPHLAALLSLLTLSIVVVHRLRVEAYRHKEAALLAERCGFTYLVSVNHTSLSDLGHSLKSFNSHFVPLPYKILILHDGLPPVDQGKLQSLSEAPLQFRFLQHIVNRTKHNISLQGPENMIYFWSYLALRQNDYLEDIDFLIRLEPSAVFTRRIRSDFVLSFVAHGLQYAYPSLHRDCSPNVTQSLKELAVSYVGLNGIQPRNVPLWNTILTSHAKSCIPYFNNHFEIINLRFFRTHSGIQDWIRAIETHGGIFHNGWHDGLLRYVTVALYAAPSKTAKYGTDRVPISPTRRRK 342          
BLAST of Gcaud7195.t1 vs. uniprot
Match: A0A814PHN9_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A814PHN9_9BILA)

HSP 1 Score: 65.1 bits (157), Expect = 5.070e-9
Identity = 32/105 (30.48%), Postives = 59/105 (56.19%), Query Frame = 0
Query:  230 TNSLRELASSYVELNGIRPRNEQLWNAILKTKTNPCMPVFSNHFEIINLRFFRTHSGVQDWIRVVETHGGVYQYGWYDSLLRYATVALYAAPSKTIRYGPDRVPF 334
            T  ++ + S YV+ N I+P+   + N     KT   +  + N+FE+  L FFR    V+ W+  +++  G+++Y W D++LRY T+AL+AA  + +      +P+
Sbjct:   64 TMDMKRVTSDYVKQNNIKPKQLDMLNNAFSNKT---VRNYYNNFEVSKLEFFRREE-VRRWVEAIDSTHGIFKYRWGDAVLRYLTLALFAAQHEVLHRPDYNLPY 164          
BLAST of Gcaud7195.t1 vs. uniprot
Match: A0A820XB01_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A820XB01_9BILA)

HSP 1 Score: 59.3 bits (142), Expect = 3.060e-6
Identity = 43/163 (26.38%), Postives = 80/163 (49.08%), Query Frame = 0
Query:  165 HNRTRFWSYLALRQNDFLSDIDFLIRLEPHAVFSSKVKFDFVRSFVANGMQYAYPS-LGRECSPNVTNSLRELASSYVELNGIRPRNEQLWNAILKTKTNPCMPVFSNHFEIINLRFFRTHSGVQDWIRVVETHGGVYQYGWYDSLLRYATVALYAAPSKTIR 326
            H   RFW +  + +   + +  +++RL+  A    K    F        + +A    +  E +   T  L++ A  Y    G+  R+ ++   I  +  +  +  + N+FEI+ + FF +   V+ W++ +E   G+Y+Y W D+LLRY T+A +AAP  T+R
Sbjct:  175 HQMIRFW-FKFIFELSVIRNYKYVMRLDDDARLQGKWFNCFEEMERKKAVYFANTDWIDTEVALPGTMKLKDFALHYQNQTGLIERDPKM---IKNSFKDDAILGYYNNFEIMKISFFLSPD-VRRWVQYIEDTRGIYKYRWGDALLRYLTLAYFAAPGTTLR 332          
The following BLAST results are available for this feature:
BLAST of Gcaud7195.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IFL3_9FLOR2.070e-15166.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A814PHN9_9BILA5.070e-930.48Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A820XB01_9BILA3.060e-626.38Hypothetical protein n=4 Tax=Rotaria TaxID=231623 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002685Glycosyl transferase, family 15PFAMPF01793Glyco_transf_15coord: 150..327
e-value: 1.3E-9
score: 37.9
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 63..331
e-value: 1.4E-23
score: 85.1
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 149..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..341
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_651_length_20246_cov_4.368345contigNODE_651_length_20246_cov_4.368345:7604..8629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7195.t1Gcaud7195.t1Gracilaria caudata M_176_S67 malemRNANODE_651_length_20246_cov_4.368345 7604..8629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7195.t1 ID=Gcaud7195.t1|Name=Gcaud7195.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=342bp
MASNRRSSTPSPASSASVFLSSSEKSGIQSSASFAQSTWRERLSLCYTLP
HLAAFLSVLTLCVVIACRLREESHRQQEAAHLAERCAFAYVASVNHTNLK
NLGHSLESFNRHIGQLTYKLLVLHDGLPPVEQGKLQSLSEAPVLFRPLQQ
TLNRTITHITLETTHNRTRFWSYLALRQNDFLSDIDFLIRLEPHAVFSSK
VKFDFVRSFVANGMQYAYPSLGRECSPNVTNSLRELASSYVELNGIRPRN
EQLWNAILKTKTNPCMPVFSNHFEIINLRFFRTHSGVQDWIRVVETHGGV
YQYGWYDSLLRYATVALYAAPSKTIRYGPDRVPFKPFMSEK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002685Glyco_trans_15
IPR029044Nucleotide-diphossugar_trans