Gcaud7191.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7191.t1
Unique NameGcaud7191.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length327
Homology
[Close]
BLAST of Gcaud7191.t1 vs. uniprot
Match: A0A2V3IM08_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM08_9FLOR)

HSP 1 Score: 378 bits (971), Expect = 1.150e-128
Identity = 208/315 (66.03%), Postives = 242/315 (76.83%), Query Frame = 0 
Query:   23 MNPVGSLNLATYDEGVAAISNSHLALDWLSIAYSPVPQASTPTPFAPSQQQQHPPTAMQPTADHSTLLTRRQAAAALVRSVRPYSAREVLAPCFRIASQFILGRVFGKLFVPSELGLSHLTTEPCADARFVLDMQHGSIVELRRYASSKSLLCIAYSNRRTEFLTLPPLHYSRVEISYQPDLAAPRAVPAQPSLPDPFISVATATALPETSSVSAQSS-----------EQPPSALIQSSWHNFCLNYASLFPTGALAATVTREPGPANAAVKKETIVVSLNDPYAMTFSDVNSPSGAALFRRQAPRRLLPRPTQ 326
            MNPVGSLNLATYDEG+AAISNS LALDWLS+AYSP  Q +T + F P QQ      A +        LTR+QA ++LVRSVRPYSAREV APCFRIA+ FILG+  GKLFVP+ELGL HLTTEPCADARFVLD+QHGSIVE+RRYA++K+LLC+A++ RRTEFLTLPPLH+SRVEISYQPD +A  A P      D   SVA+ +A P ++S+S QSS           E   +ALIQSSWH+FC+NY+S+FPTGALAATVT EPG  +A VKKE IV S+ND YA+TFSD  SP G  LFRRQAPRRLLPRPTQ
Sbjct:    1 MNPVGSLNLATYDEGIAAISNSQLALDWLSLAYSPNSQ-TTLSAFPPQQQPXXXXXAPR------GQLTRKQAVSSLVRSVRPYSAREVFAPCFRIATHFILGKTLGKLFVPTELGLPHLTTEPCADARFVLDLQHGSIVEVRRYAATKALLCVAHAKRRTEFLTLPPLHFSRVEISYQPDASA-GACPTTAG--DQLTSVASTSAAPISASISVQSSSHLSPLFEQVEETSRAALIQSSWHHFCVNYSSIFPTGALAATVTTEPGSVSAVVKKEIIVTSINDAYALTFSDPTSPLGTGLFRRQAPRRLLPRPTQ 305
The following BLAST results are available for this feature:
BLAST of Gcaud7191.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IM08_9FLOR1.150e-12866.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3224_length_3796_cov_3.771120contigNODE_3224_length_3796_cov_3.771120:600..1790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7191.t1Gcaud7191.t1Gracilaria caudata M_176_S67 malemRNANODE_3224_length_3796_cov_3.771120 600..1790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7191.t1 ID=Gcaud7191.t1|Name=Gcaud7191.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=327bp
XSAQSVARIHSPSQCSAHAPRAMNPVGSLNLATYDEGVAAISNSHLALDW
LSIAYSPVPQASTPTPFAPSQQQQHPPTAMQPTADHSTLLTRRQAAAALV
RSVRPYSAREVLAPCFRIASQFILGRVFGKLFVPSELGLSHLTTEPCADA
RFVLDMQHGSIVELRRYASSKSLLCIAYSNRRTEFLTLPPLHYSRVEISY
QPDLAAPRAVPAQPSLPDPFISVATATALPETSSVSAQSSEQPPSALIQS
SWHNFCLNYASLFPTGALAATVTREPGPANAAVKKETIVVSLNDPYAMTF
SDVNSPSGAALFRRQAPRRLLPRPTQ*
back to top