Gcaud718.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud718.t1
Unique NameGcaud718.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length128
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud718.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..69
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 68..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_550_length_22398_cov_4.682432contigNODE_550_length_22398_cov_4.682432:16849..17626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud718.t1Gcaud718.t1Gracilaria caudata M_176_S67 malemRNANODE_550_length_22398_cov_4.682432 16849..17626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud718.t1 ID=Gcaud718.t1|Name=Gcaud718.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=128bp
MQCQPPIGWGVAFFFLIDGLSLTNGVLRSHAPKPETEWGPAQNVGYTPNL
FDELAIGIFLTSNFDTRFTFGYWSFCLLSVACWLTSICDNKKRSYTNNLL
ALCHTSSRGSCSDSLQPTEYQPQQSRH*
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