Gcaud7125.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7125.t1
Unique NameGcaud7125.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length159
Homology
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A2V3IG60_9FLOR (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG60_9FLOR)

HSP 1 Score: 199 bits (506), Expect = 9.290e-63
Identity = 110/170 (64.71%), Postives = 133/170 (78.24%), Query Frame = 0
Query:    1 MNSQPAFLTPSSLALNSFRPVQTC-RNSSASRVAIRRLCATATDPERPKNVQASDPPP-PEPVTP----------PKPQFEEQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            M+ Q AF   S+++ N  R  QTC R ++ +RVA+RR  ATA DPERPKN+Q   P P PEP             P  QFE+QVPGK++LDE+T+ KQRTVLE+YSR+LR+KRL+EEREA+R+FG+VPYAETLNGRLAMFF+VTGLLTEYWTGYTLPEQVELMLRTLGI+
Sbjct:    1 MHPQLAFANSSNVSFNRIRRSQTCIRPTTTTRVAVRRWRATAADPERPKNIQPPTPDPLPEPPAQQESQXXXXXVPDAQFEQQVPGKIQLDELTIAKQRTVLEEYSRELRQKRLEEEREAARIFGWVPYAETLNGRLAMFFLVTGLLTEYWTGYTLPEQVELMLRTLGII 170          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 9.710e-24
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 0
Query:   69 EEQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            ++ VPGK+ +D+ TL +Q+  LE Y+RQLR +RL  E E +RL G+ P AE  NGR AMFFIV G+LTEYWTG ++P+QVE M   +G+L
Sbjct:   70 DDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLL 159          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 9.220e-22
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   70 EQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E+VPG+ +L  + L +QR  L   + + +  RL +E E+ R+FGF   AE +NGR AMFF VTG+LTEYWTG T+P+Q+EL+LR LGI+
Sbjct:   54 ERVPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A1X6NQV6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQV6_PORUM)

HSP 1 Score: 94.4 bits (233), Expect = 2.040e-21
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
Query:   68 FEEQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            +E   PGKV L+E+ L +Q+  L     +   +R + ER   R+FG+VP AE LNGRLAMFF VTGLLTE WTG T+PEQVEL+ RTLG +
Sbjct:   84 YEGAPPGKVVLNEIQLAEQKKALNQLGDRWEAERKEVERTEKRIFGWVPGAERLNGRLAMFFFVTGLLTELWTGDTIPEQVELLARTLGFI 174          
BLAST of Gcaud7125.t1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V653_CYAM1)

HSP 1 Score: 94.4 bits (233), Expect = 4.340e-21
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   70 EQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E+VPG+ +L  + L +QR  L   + + +  RL +E E+ R+FGF   AE +NGR AMFF VTG+LTEYWTG T+P+Q+EL+LR LGI+
Sbjct:  117 ERVPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A5J4YWB8_PORPP (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWB8_PORPP)

HSP 1 Score: 88.2 bits (217), Expect = 3.910e-19
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   68 FEEQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            +E   PG  EL    L +Q+ VL   S + + +R+  E E SRLFG    AE LNGR+AMFF+ TGLLTEYWTG  +PEQVE + RTLG++
Sbjct:   74 YEGPGPGMRELTPAELAEQKKVLVALSEEWKAERMDREFEQSRLFGLTRRAEILNGRVAMFFLATGLLTEYWTGENIPEQVETLFRTLGLI 164          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A7J7IMA7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA7_9RHOD)

HSP 1 Score: 89.4 bits (220), Expect = 5.230e-19
Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   70 EQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E+ PG+ +L    L +QR  +   + + + +R+  E EA R+FGF   AE +NGR AMFF  TG+LTEYWTG T+P+Q+EL+LR LG L
Sbjct:  134 ERAPGRYKLSAAELAEQRRAIRAVAERYKAERIAREAEARRVFGFCRNAEIINGRTAMFFFATGMLTEYWTGQTMPQQIELLLRILGFL 222          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A7S2MZX0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZX0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.470e-19
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   70 EQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E VPGKV L+++ L  Q T L     + R++RL+ E + +RL G+   AET NGR AMFF+V GLLTEYWTG T+P Q+E MLR  G +
Sbjct:   86 EDVPGKVVLNDVQLAAQVTALSKLEEKWRKERLQTEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 174          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A7S2A473_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A473_TRICV)

HSP 1 Score: 85.9 bits (211), Expect = 6.010e-19
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   70 EQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E VPGK+ L+E+ L  Q   L +   + R++R+++E + +R+ G+   AET NGR AMFF+V GLLTEYWTG T+P Q+E MLR  G +
Sbjct:    9 ENVPGKIVLNEVELAAQVAALGNLEEKWRKERMQKEYDEARILGWTARAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 97          
BLAST of Gcaud7125.t1 vs. uniprot
Match: A0A7S3QJZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJZ1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.570e-19
Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   70 EQVPGKVELDEMTLIKQRTVLEDYSRQLREKRLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            + VPGK+ +D++ L  Q T L     + ++ RL+EE + +R+ G+   AET NGR AMFF+V GLLTEYWTG T+P Q+E MLR  G +
Sbjct:   75 DNVPGKMVVDDLALAAQNTALSQIEDRYKKVRLQEEYDLARILGWTNRAETFNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 163          
The following BLAST results are available for this feature:
BLAST of Gcaud7125.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG60_9FLOR9.290e-6364.71Light-harvesting complex-like protein OHP2, chloro... [more]
A0A836CEG8_9STRA9.710e-2454.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7V5I693_9BACT9.220e-2251.69Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A0A1X6NQV6_PORUM2.040e-2154.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M1V653_CYAM14.340e-2151.69Similar to high light inducible protein n=1 Tax=Cy... [more]
A0A5J4YWB8_PORPP3.910e-1951.65Light-harvesting complex-like protein OHP2, chloro... [more]
A0A7J7IMA7_9RHOD5.230e-1948.31Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S2MZX0_9STRA5.470e-1951.69Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2A473_TRICV6.010e-1948.31Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3QJZ1_9STRA8.570e-1948.31Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..67
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 21..157
NoneNo IPR availablePANTHERPTHR33401:SF1LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 21..157
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 111..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_26_length_75114_cov_4.470882contigNODE_26_length_75114_cov_4.470882:20959..21435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7125.t1Gcaud7125.t1Gracilaria caudata M_176_S67 malemRNANODE_26_length_75114_cov_4.470882 20959..21435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7125.t1 ID=Gcaud7125.t1|Name=Gcaud7125.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=159bp
MNSQPAFLTPSSLALNSFRPVQTCRNSSASRVAIRRLCATATDPERPKNV
QASDPPPPEPVTPPKPQFEEQVPGKVELDEMTLIKQRTVLEDYSRQLREK
RLKEEREASRLFGFVPYAETLNGRLAMFFIVTGLLTEYWTGYTLPEQVEL
MLRTLGIL*
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