Gcaud7084.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7084.t1
Unique NameGcaud7084.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length199
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7084.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 176..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_796_length_17841_cov_4.459606contigNODE_796_length_17841_cov_4.459606:6912..7508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7084.t1Gcaud7084.t1Gracilaria caudata M_176_S67 malemRNANODE_796_length_17841_cov_4.459606 6912..7508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7084.t1 ID=Gcaud7084.t1|Name=Gcaud7084.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=199bp
MKALSCALIVLLLAVFVDRHDAEELQAQSVRSVSDVKLGKKGTCGSDNLE
SEAKCSCYHGSTKDSMPGPFEDVCKKAFGNDLSALKDSCAPYMKNGDLDD
GLKASHEKTIDTCEGELPSDGAGSSRMVTKESARFVPFGTVICIGRWWGW
TLGWPWGWPGFYGWWYWWWIIRYHYYWYWRCYIISIFGGIFGAASPSL*
back to top