Gcaud7027.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7027.t2
Unique NameGcaud7027.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length236
Homology
BLAST of Gcaud7027.t2 vs. uniprot
Match: A0A2V3IJB2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB2_9FLOR)

HSP 1 Score: 323 bits (829), Expect = 2.040e-104
Identity = 159/226 (70.35%), Postives = 193/226 (85.40%), Query Frame = 0
Query:    1 MARFSDGLSFRQFEKCFSEQNRKRSVYEIEGLADVEAFLNDCKTIALDQMPNRALERMDRVSQRHLKQALVTRKRQFTLSGAREGWFMWTAEDDRLLALTIAKYGREVAEYSKDLLPHRLEEDCQARVRHLCSRRCTDNAVKRQMTLISAPLNQQEVKLVQQGLRMFGECVEDQEVWKRIQRELLPGRQWSLLQKLWMWREARKKTKARYRAKVNQKKKAMKNAAK 226
            ++RFSD L +R FE+CF ++NR++S Y I+G   +E F++DC+T+ ++Q+P+ A+ R+D V + HLKQAL TRKRQFTL+GAREGWF WTAEDDRLLALTIAKYGREV EY+KDLLPHRLE DCQARVRHL SRRC DNAVKRQ+  ISAPLNQQEV LVQ GL+ FG  VED +VWKRIQRELLPGRQWSLLQKLW+WRE RKKTKARYRAK +++K+A+++A K
Sbjct:  395 ISRFSDELGYRAFEQCFRKENRRKSAYAIDGFESIEMFMSDCRTLPVEQLPSGAVARLDIVCRPHLKQALSTRKRQFTLTGAREGWFTWTAEDDRLLALTIAKYGREVGEYAKDLLPHRLEGDCQARVRHLSSRRCADNAVKRQVMHISAPLNQQEVALVQYGLQSFGSRVEDCDVWKRIQRELLPGRQWSLLQKLWLWRETRKKTKARYRAKESERKRALRDARK 620          
BLAST of Gcaud7027.t2 vs. uniprot
Match: R7Q8N9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N9_CHOCR)

HSP 1 Score: 221 bits (563), Expect = 3.890e-64
Identity = 120/224 (53.57%), Postives = 152/224 (67.86%), Query Frame = 0
Query:    4 FSDGLSFRQFEKCFSEQNRKRSVYEIEGLADVEAFLNDCKTIALDQMPNRALERMDRVSQRHLKQALVTRK--RQFTLSGAREGWFMWTAEDDRLLALTIAKYG-REVAEYSKDLLPHRLEEDCQARVRHLCSRRCTDNAVKRQMTLISAPLNQQEVKLVQQGLRMFGE--CVEDQEVWKRIQRELLPGRQWSLLQKLWMWREARKKTKARYRAKVNQKKKAMK 222
            FS+ L  R     F  +  K S Y +  L  +E F++DC+   L++MP   L R        + QA+ TR   RQ++ SG R GWF WTA DD LLA+T+AKYG  EV ++SKDLLPHR E+DCQ RV++L SRRC DN VKRQ+ LI++PLN  EV+ V +GL MFG   C++D  VWKRIQ ELLPGR+WS LQKLW WRE R+K KA+YRA+  +KKKAMK
Sbjct:  503 FSEKLLHRDGNAAFKYETCKTSAYNLPVLDLLEQFISDCRNANLEEMPGNVLARFKPFHNPQISQAMWTRPQGRQYSASGLRPGWFSWTAGDDFLLAITMAKYGSNEVGQFSKDLLPHRKEDDCQTRVKYLSSRRCPDNPVKRQVMLITSPLNNYEVEQVTRGLSMFGRGACLDDAAVWKRIQAELLPGREWSHLQKLWHWRETRRKYKAKYRARSYKKKKAMK 726          
The following BLAST results are available for this feature:
BLAST of Gcaud7027.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJB2_9FLOR2.040e-10470.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8N9_CHOCR3.890e-6453.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_148_length_43424_cov_4.421157contigNODE_148_length_43424_cov_4.421157:33047..33754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7027.t2Gcaud7027.t2Gracilaria caudata M_176_S67 malemRNANODE_148_length_43424_cov_4.421157 33047..33754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7027.t2 ID=Gcaud7027.t2|Name=Gcaud7027.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=236bp
MARFSDGLSFRQFEKCFSEQNRKRSVYEIEGLADVEAFLNDCKTIALDQM
PNRALERMDRVSQRHLKQALVTRKRQFTLSGAREGWFMWTAEDDRLLALT
IAKYGREVAEYSKDLLPHRLEEDCQARVRHLCSRRCTDNAVKRQMTLISA
PLNQQEVKLVQQGLRMFGECVEDQEVWKRIQRELLPGRQWSLLQKLWMWR
EARKKTKARYRAKVNQKKKAMKNAAKRGSNALASG*
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