Gcaud7018.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7018.t1
Unique Name	Gcaud7018.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	749

Homology

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BLAST of Gcaud7018.t1 vs. uniprot
Match: A0A2V3IJC4_9FLOR (NEDD4-like E3 ubiquitin-protein ligase WWP1 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC4_9FLOR)

HSP 1 Score: 971 bits (2510), Expect = 0.000e+0
Identity = 491/756 (64.95%), Postives = 577/756 (76.32%), Query Frame = 0

Query:    1 MQVIPHDEPSKPVDTFHVNISNVRATLRVAEARPVILKFAFDNYWHAETDVFTHDSVNPTWRFNLNTVCGLDGRKPVTADGLAP-DLAPDVDPIQPSARFIYETEFGYKLHRKYLIVTLCERSPYQDVVWGTGIVPLDSIARGCDALNMSIFAKDALKHYGNVFCNITMTNVQRVRAHLTDLRLSEYPEIFSYDVKLIYIEFGLHPFLHGFNRCTEKRSDAEPRFSAQPALEFDTTLHDMLISSTPNAPSLKIFFSVHRQVARNRTEQIGVGALPVRLLFSKVRDGWMGLPTKFKVPLADYRGIIRGKVLLRNIPQFSQLPGSDLTNVDGTIMPQNVDLDSRRLLPWVKLPKAEERRLRLANEPDSTQSPVPKLHHHFATSASDSLDEKSMNLETVLEQGVRPQNHQIPA-----LNVREGEFHTPVS-ESEGGSEASSRATSPRVDGRLFAAVDSAFVRDTHGTRSPLPQKTP-HGDQRLLHAQESPSTVQRPAWTTQEAADDAASTISKLRDRVNPHAVSHVEQIKLFGALREANKEGDGESYEELSRLRISASPGRSKPRQHSDESSSSRVNPSGASEATYDEHDSPQDMRNRRNKSGKSFGSSCTTEAGTEXXXXXXXXXXXXXXXXXXXXDALTTNQKLNVCPPADERYEYEVDEFAGGYEVSPDEPAPDVQISETTLEGDE-EWLAVHDPGSSRFYFAHRYTQESLWLPPGWERMVDNEGRQYFVDHASQTTQWEFPATEARAYRESVYA 747
            MQVIP +EP+KPVDTFHV+ISNV A LR+AE+RPVILKFAFDNYWHAETDVFT DSV P W FN +T+ G DGRKP  ADG AP   +   +P+QPS  F+YET+FGYKLHRKYLIVTLCERSPYQDV WGTG++PLDSIARGC++++MSI AKD L +YGNV+CNITMTNVQRVRAHLTDL+LSEYPE+FSYDVKLIY+EFG   F +GF RCTE+RSDAEPRFSAQPAL++DTTL DML++STPNAP++ IFFSVHRQVARNRTE+IGVGALP+R+LFSK+RDGWM LPTKF+VPLA+YRGIIRGKVLLRNIPQFSQLPGSDLTNVDG IMP +VDL SR+LLPW+KLPK+ E+R ++A E  +TQ P    HHH   S SD    KS+  ET  E  V P +   PA     L     +   P S E +GGSE SS  TSPR+  R F A+D+  +RD    R+ +P+       Q    A  SPSTVQR +W   ++ DD+ STISKLR +V+P A SHVEQIKLF ALREA+++ +GES EELS+LRIS SPGRSKPRQHSDESSSSRV  S AS+ T D  +SP DM+ RRNKSGKSFGSSCTTE G E                    DA   NQKL  C P +E+Y+YE ++     E SPD   P + ++E   + DE EW A+HDPGSSR+YFAHRYTQESLWLPPGWERMVD +G+QYFVDHAS++TQW FPATEAR+YRESVYA
Sbjct:   37 MQVIPDEEPTKPVDTFHVSISNVHAVLRIAESRPVILKFAFDNYWHAETDVFTKDSVQPQWNFNTDTIRGFDGRKPAAADGTAPHQQSAPTNPVQPSTSFVYETQFGYKLHRKYLIVTLCERSPYQDVEWGTGVIPLDSIARGCESVDMSIVAKDGLTYYGNVYCNITMTNVQRVRAHLTDLKLSEYPEVFSYDVKLIYLEFGTRAFENGFCRCTERRSDAEPRFSAQPALQYDTTLRDMLVTSTPNAPAIMIFFSVHRQVARNRTEEIGVGALPIRMLFSKIRDGWMNLPTKFRVPLANYRGIIRGKVLLRNIPQFSQLPGSDLTNVDGVIMPVHVDLQSRKLLPWIKLPKSTEKRRQMATENQATQLPYGVNHHHLTPSVSD----KSVQSETTREPSVPPTSQPQPAQPQQQLQAPPDQPRDPHSTEYDGGSEPSSNTTSPRLQRRPFPAMDTFVLRDNLKKRAAVPRTQQIEPPQHDTGAHGSPSTVQRSSWAVSDSGDDSTSTISKLRSKVDPRASSHVEQIKLFAALREASRDNEGESCEELSKLRISDSPGRSKPRQHSDESSSSRVPTSRASDGTCDGRESPPDMQARRNKSGKSFGSSCTTEGGVEVGSTVLSDDGYLTGSRTNPQDA---NQKLTRCAPGEEQYDYEEEDIRETCETSPDTSLPGLDLAEGAYDDDEDEWQAIHDPGSSRYYFAHRYTQESLWLPPGWERMVDEDGKQYFVDHASRSTQWRFPATEARSYRESVYA 785

The following BLAST results are available for this feature:

BLAST of Gcaud7018.t1 vs. uniprot

BLAST of Gcaud7018.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJC4_9FLOR	0.000e+0	64.95	NEDD4-like E3 ubiquitin-protein ligase WWP1 n=2 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 704..736 e-value: 1.2E-7 score: 41.4
IPR001202	WW domain	PFAM	PF00397	WW	coord: 705..734 e-value: 7.7E-10 score: 38.7
IPR001202	WW domain	PROSITE	PS01159	WW_DOMAIN_1	coord: 709..734
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 703..736 score: 15.8997
IPR001202	WW domain	CDD	cd00201	WW	coord: 706..734 e-value: 7.04294E-9 score: 49.8338
None	No IPR available	GENE3D	2.20.70.10		coord: 705..737 e-value: 6.7E-13 score: 50.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 561..576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 533..602
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 475..497
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..591
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..405
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 697..736

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_148_length_43424_cov_4.421157	contig	NODE_148_length_43424_cov_4.421157:238..2484 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7018.t1	Gcaud7018.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_148_length_43424_cov_4.421157 238..2484 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7018.t1 ID=Gcaud7018.t1|Name=Gcaud7018.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=749bp
MQVIPHDEPSKPVDTFHVNISNVRATLRVAEARPVILKFAFDNYWHAETD
VFTHDSVNPTWRFNLNTVCGLDGRKPVTADGLAPDLAPDVDPIQPSARFI
YETEFGYKLHRKYLIVTLCERSPYQDVVWGTGIVPLDSIARGCDALNMSI
FAKDALKHYGNVFCNITMTNVQRVRAHLTDLRLSEYPEIFSYDVKLIYIE
FGLHPFLHGFNRCTEKRSDAEPRFSAQPALEFDTTLHDMLISSTPNAPSL
KIFFSVHRQVARNRTEQIGVGALPVRLLFSKVRDGWMGLPTKFKVPLADY
RGIIRGKVLLRNIPQFSQLPGSDLTNVDGTIMPQNVDLDSRRLLPWVKLP
KAEERRLRLANEPDSTQSPVPKLHHHFATSASDSLDEKSMNLETVLEQGV
RPQNHQIPALNVREGEFHTPVSESEGGSEASSRATSPRVDGRLFAAVDSA
FVRDTHGTRSPLPQKTPHGDQRLLHAQESPSTVQRPAWTTQEAADDAAST
ISKLRDRVNPHAVSHVEQIKLFGALREANKEGDGESYEELSRLRISASPG
RSKPRQHSDESSSSRVNPSGASEATYDEHDSPQDMRNRRNKSGKSFGSSC
TTEAGTEAGSTVLSEDGCQVGSRTTTQDALTTNQKLNVCPPADERYEYEV
DEFAGGYEVSPDEPAPDVQISETTLEGDEEWLAVHDPGSSRFYFAHRYTQ
ESLWLPPGWERMVDNEGRQYFVDHASQTTQWEFPATEARAYRESVYAG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom
IPR036020	WW_dom_sf