Gcaud6994.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6994.t1
Unique NameGcaud6994.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length455
Homology
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A2V3IIV9_9FLOR (E3 ubiquitin-protein ligase MIB2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIV9_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 1.690e-31
Identity = 65/110 (59.09%), Postives = 84/110 (76.36%), Query Frame = 0
Query:  336 LPCVRHIIVDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRRR 445
            L C   IIVD+LVDFRNAH LPQ +QDAI++LA   FK SE+++KTIFLDE+G+LC +  NEF EL  VTN+L +SS A + G++  VTK+MVF+P WL+ NY EP+ RR
Sbjct:   38 LGCGVDIIVDDLVDFRNAHTLPQHRQDAIYELATDEFKISEVLDKTIFLDEEGDLCEDRDNEFLELKQVTNILAISSSATLGGKQVQVTKVMVFRPRWLKHNYYEPLNRR 147          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A7S1GIV5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIV5_CYCTE)

HSP 1 Score: 121 bits (303), Expect = 2.400e-26
Identity = 61/127 (48.03%), Postives = 85/127 (66.93%), Query Frame = 0
Query:  323 FPRGRQDVLLYHFLPCVR-----HIIVDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            FP+   + + Y +L CV       IIVDELVDFRN HRLP  +QDA+F++A   F P   ++K I+ DE G+LC  S+NEFYE+T V ++L + S  +I G++T V KIMVFK  WL+ NY++P+ R
Sbjct:   31 FPQNDVNKVAY-YLHCVTVSLGLDIIVDELVDFRNVHRLPSSRQDAVFKVAIEDFSPDVFLDKLIYHDESGKLCGNSNNEFYEVTQVQSLLAIQSSVVIGGKKTQVAKIMVFKKAWLENNYIQPLNR 156          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A818V0L8_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A818V0L8_9BILA)

HSP 1 Score: 74.7 bits (182), Expect = 3.540e-12
Identity = 41/119 (34.45%), Postives = 66/119 (55.46%), Query Frame = 0
Query:  332 LYHFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            + +++ CV  +I      +    ++ N   +   +   IF LA     P E+ N+  F   +  LCP+++N+FYE+  V N L V    +I GR   V KIMV+KP+W+Q+NY+EPM+R
Sbjct:   28 IMYYIDCVCTVIDYNDNNISRYRNYSNWRNMSDDEDRLIFLLAL-TLSPKELENRVFF--NNSALCPDATNQFYEIGQVQNRLMVVQSIVIGGRSRQVKKIMVYKPIWMQRNYIEPMQR 143          
BLAST of Gcaud6994.t1 vs. uniprot
Match: UPI0009E55F07 (uncharacterized protein LOC110051182 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E55F07)

HSP 1 Score: 72.0 bits (175), Expect = 5.630e-11
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  332 LYHFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMR 443
            L ++L CV H+I      +  L ++   + L   + DA+  L    F P E+I K  F  ED   C  S+N+F+EL++VT++L VS   LI G    V  IM FK  WL+ N++ P+R
Sbjct:   28 LMYYLHCVAHVIQLDNPNLSRLRNYERYYLLSDAEIDALLALVL-IFSPDELIGKVFFPSED---CGGSTNQFFELSSVTHMLAVSDNVLIGGERKRVANIMFFKRCWLEGNFISPLR 141          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A816ZJ56_9BILA (Hypothetical protein n=5 Tax=Rotaria TaxID=231623 RepID=A0A816ZJ56_9BILA)

HSP 1 Score: 68.9 bits (167), Expect = 3.890e-10
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 0
Query:  334 HFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            +++ CV  +I      +    ++ N   +   +   IF LAA    P E  +K  F  E+  LCP SSN+FYE+  V N L V    +I GR   V KIM +K +W+Q NY  PM+R
Sbjct:   30 YYIDCVCTVIEYDDNNIRRYRNYSNWRNMSDEEDKLIFILAA-TLSPDEFEDKIFF--ENNALCPNSSNQFYEIGQVKNQLLVVQSIVIGGRTRQVKKIMAYKSIWMQTNYYRPMQR 143          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A821SGD0_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821SGD0_9BILA)

HSP 1 Score: 67.0 bits (162), Expect = 4.820e-10
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0
Query:  360 QQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            ++D +  + A    P E+ +K  F  E  +LCP SSN+FYE+  V N L V    +I GR   V KIM +   W+Q+NY +PM+R
Sbjct:    4 EEDKLIFILAATLSPDELEDKVFF--ESDDLCPNSSNQFYEIGQVKNQLLVVQSIVIGGRTRQVKKIMAYTNAWMQKNYYQPMQR 86          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A814TV48_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814TV48_9BILA)

HSP 1 Score: 65.9 bits (159), Expect = 4.550e-9
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 0
Query:  332 LYHFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            + ++L CV  +I      +    ++ N   +   +   IF LAA    P E+ +K  F  E+G+LC  +SN+FYE+  V N L V    +I GR   + +IM +   W+Q+NY +PMRR
Sbjct:   28 IMYYLDCVCTVIDYDDNNIRRYRNYSNWMNMSDEEDKLIFILAA-TLSPDELEDKVFF--ENGKLCSNTSNQFYEIGQVKNQLLVVQSIVIGGRTRQIQRIMAYTNGWMQRNYYQPMRR 143          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A817PE50_9BILA (Hypothetical protein n=4 Tax=Rotaria socialis TaxID=392032 RepID=A0A817PE50_9BILA)

HSP 1 Score: 64.7 bits (156), Expect = 1.120e-8
Identity = 35/116 (30.17%), Postives = 62/116 (53.45%), Query Frame = 0
Query:  332 LYHFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEP 441
            L ++L C+  ++      ++ L DFRN   L + +   ++ +      P + I K +F D+DG+LC  S N  +++  V   L V+   ++ GR   VTK+MV++P WL + Y+ P
Sbjct:   28 LMYYLDCLCTLVEYDESALNRLRDFRNYDDLSEAEIRLLY-VTCVTLDPDDFIGKILFEDQDGDLCGASLNRMFDIGNVRRSLVVADSIVLAGRTRQVTKVMVYRPEWLNKFYIRP 142          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A819X1S2_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A819X1S2_9BILA)

HSP 1 Score: 64.3 bits (155), Expect = 1.960e-8
Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 0
Query:  332 LYHFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            L ++L CV + I      V    D+ N   L   +Q A+   A     P+E+  +  F  +  ELC ++SN+FYEL+ V + L      +I G+  NV KIM +K  W+Q NY+EP++R
Sbjct:   29 LMYYLNCVFNAIEYKDQDVRRYRDYHNWSLLSDTEQRAVLVFALA-LSPNELDGQVFFHSD--ELCGDNSNKFYELSQVRHQLLAVQSIVISGQTHNVKKIMTYKMSWIQNNYIEPVKR 144          
BLAST of Gcaud6994.t1 vs. uniprot
Match: A0A821ZAU6_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821ZAU6_9BILA)

HSP 1 Score: 63.2 bits (152), Expect = 4.140e-8
Identity = 39/117 (33.33%), Postives = 59/117 (50.43%), Query Frame = 0
Query:  334 HFLPCVRHII------VDELVDFRNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYELTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRR 444
            ++L CV  +I      +    ++ N   +   +   IF LA     P E+ +K  F      LCP+SSN+FYE+  V   + V    +I G+   V KIM +K VW++ NY EPM+R
Sbjct:   36 YYLDCVCTVIEYNDNNIRRYRNYSNWRNMSDEEDRFIFLLALA-LSPDELEDKVFF--NAPALCPDSSNQFYEIGQVRRQIMVVQSIIIGGQSRQVKKIMAYKQVWMRANYYEPMQR 149          
The following BLAST results are available for this feature:
BLAST of Gcaud6994.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3IIV9_9FLOR1.690e-3159.09E3 ubiquitin-protein ligase MIB2 n=1 Tax=Gracilari... [more]
A0A7S1GIV5_CYCTE2.400e-2648.03Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A818V0L8_9BILA3.540e-1234.45Hypothetical protein n=2 Tax=Rotaria sordida TaxID... [more]
UPI0009E55F075.630e-1136.44uncharacterized protein LOC110051182 n=1 Tax=Orbic... [more]
A0A816ZJ56_9BILA3.890e-1035.90Hypothetical protein n=5 Tax=Rotaria TaxID=231623 ... [more]
A0A821SGD0_9BILA4.820e-1040.00Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A814TV48_9BILA4.550e-933.61Hypothetical protein n=2 Tax=Rotaria sordida TaxID... [more]
A0A817PE50_9BILA1.120e-830.17Hypothetical protein n=4 Tax=Rotaria socialis TaxI... [more]
A0A819X1S2_9BILA1.960e-834.45Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A821ZAU6_9BILA4.140e-833.33Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..454
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_75_length_56064_cov_4.301592contigNODE_75_length_56064_cov_4.301592:6976..9520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6994.t1Gcaud6994.t1Gracilaria caudata M_176_S67 malemRNANODE_75_length_56064_cov_4.301592 6976..9520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6994.t1 ID=Gcaud6994.t1|Name=Gcaud6994.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=455bp
MKRWALALACQPVSTLCRPHTELPYADNLDMMSNMGQLAVLPPNAGLEPP
FYTADRHFFLGIRAFNMWVGDLWQTETAYVSHYMGIVNPADPFSWLSARE
GALIFGALPHGQDVVCVLAVKCGHGYRLFRSRGEVGAYRHAERTAGTSVR
AMIASTAASARVNVNKELRWKLLYSSCEEDIPNEIDGLETRFRTARERNL
IQGDGLLPAVFHRITKKIVLSAIAKCEDAEAEERVLEKAKPLHVTDKWNE
HVSENYDDIVRVADGNQGIVWLEGVSSDRMSFGVLHFLTEGPILSDEAIN
FEEIRLPSVWDGVQYALSVSSKFPRGRQDVLLYHFLPCVRHIIVDELVDF
RNAHRLPQRQQDAIFQLAAGPFKPSEMINKTIFLDEDGELCPESSNEFYE
LTTVTNVLNVSSVALIHGRETNVTKIMVFKPVWLQQNYLEPMRRRMLNDF
RLLI*
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