Gcaud6992.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6992.t1
Unique NameGcaud6992.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length773
Homology
BLAST of Gcaud6992.t1 vs. uniprot
Match: A0A0G4IC70_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IC70_9ALVE)

HSP 1 Score: 86.3 bits (212), Expect = 1.190e-13
Identity = 109/491 (22.20%), Postives = 195/491 (39.71%), Query Frame = 0
Query:  121 KIVDTYRNSSVWLFDTKGKSSVVDARWVVAFRGTSVLKDLLTDAELAASVATDRDIGIEKAFDKIAALLTKVFSEHKVSRSDSIQLIGHSLGASVAEAMLLRLKKDGYSSVLACGFDSPGLPQWYRD---------GYEAQDVYRSRPLTLVYMVDNFINNLTPAPPGASCFRVNKVEPLDYLNVLNFIKTALKNGVSLIDMIKGSIDEHRNLEKMADLIDDGYFEHDEETSGRDVSGQVLRFIYRAYCSIVYRGASKG----DPAPKDAHSIRTADAATESKAKTAGSEFSEFPDVETALQAFYDKRGGQPTPYAVTNFHAFANKLDA------QRDIVCPFIGVTSVGKTSLLKAIFNLAPDDNLLRVSAVMDTTTTDTVLLWKVLDDEEDKGN--TVRLWLMDMPGVHGSAAGHKASSAKDMRLRSQLYAMKEMVQAAVYVTGTNPNDEAKRLFREVCEVLGDRVLVVHNVLHTVRQNQERNRLRKES 590
            ++V       +W+F           R+VV  RGT      + DA L A VA D  +  E   D  +     +      +    +  +GHSLGA+VAEA+ L         V     D+PG P  +RD         G    D+  ++ + ++    N +N LT  P  +S + V     +    V++         V+L  +IK   D H+ L ++   +  G  +    +     SG + + ++  +       A+       P P   H     D    +   T        P   T  +   D +    T Y + +  AFA  L+       Q+D++   +G+T +GKT+LL++   +   + +L  S   + T    ++ +K   +E+  G   TV  +++D PG++ + A     +  D+ L      M   V  A++V+  +     + +F +   +L  RV  V+N  H    N+++ R   ES
Sbjct:  106 RLVRVLDEGGIWIFKCAETCGCPSTRFVVGIRGTDQAHQFVEDARLLADVACDSGLFKEVIADYQSESDRGLLESGYDASKHELVYVGHSLGAAVAEALALSCYMKKQYKVQPICIDTPGTPPLFRDAAKHLVNSFGGRFNDLV-NKNIRVLNSTPNLVNTLTK-PISSSFWTVGGGSNVGCEAVMSLAYNIFWK-VNLQQVIKTLCDSHK-LVRIRACLRQGELQESLVSRWPTASGSIAKGLWMWWTDSTRDAATATRPVRGPTPPQPHDPPARDPPPVTTPCTDQRTLMSKPP--TVPRDLCDVQLN--TVYLIEDRDAFAQSLEERNSPAKQQDVIVTVVGLTGMGKTTLLESFLRMQGSNTVLPKSVEANCTKDYHLIRYKQEREEDSNGMEYTVNYYVLDQPGLNNTNAQPACQADVDILLSRM---MDLGVSVALFVSNESKQWILRYMFTQCYSLLKGRVGFVYN-RHLEADNEQQERRGFES 584          
BLAST of Gcaud6992.t1 vs. uniprot
Match: A0A2P6NY54_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NY54_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 8.960e-6
Identity = 98/436 (22.48%), Postives = 167/436 (38.30%), Query Frame = 0
Query:  146 RWVVAFRGTSVLKDLLTDAELAASVATDRDIGIEKAFDKIAALLTKVFSEHKVSRSDSIQLIGHSLGASVAEAMLLRLKKDGYSSVLACGFDSPGLPQWYRDGYEAQD------VYRSRPLTLVYMVDNFINNLTPAPPGASCFRVNKVEPLDYL----NVLNFIKTALKNGVSLIDMIKGSIDEHRNLEKMADLIDDGYFEHDEETSGRDVSGQVLRFIYRAYCSI------VYRGASKGDPAP-----KDAHS--IRTADAATESKAKTAGSEFSEFPDVETALQAFYDKRGGQPTPYAVTNFHAFANKLDAQR--------DIVCPFIGVTSVGKTSLLKAIFNLAPDDNLLRVSAVMDTTTTDTVLLWKVLDDEEDKGNTVRLWLMDMPGVHGSAAGHKASSAKDMRLRSQLYAMKEMVQAAVYVTGTNPND 550
            ++VV  RGTS ++DL  D  L           + +  ++I   L+       +S+ + I  +GHSLG S+AE++L+     G     A  FDSPG P  +   Y+  +         S P  +  M  +          G   F + +V           VL+  +T + + V+   M+  +I EH         ++ G     ++ S   +S Q L  I RA   +      +Y    KG   P      +A S  IRTA          A    S+ P+    +Q F          Y VT       + D QR        D++ PF G +  GK++ L  +   A     +     ++ +T+  ++ +   DD E      R++L+D PG          +  + +R   ++  + + +  AVY+    P D
Sbjct:  112 KYVVVIRGTSTIQDLFQDLHLVVGATGFHTNDLIRTVEQIDRQLSNQDYVADLSK-EKITFVGHSLGGSIAESLLICRHFKGIKGCTAISFDSPGQPDHFHSTYQTAECVEGSYTLNSTPNLVNMMFKSRARYFYVCGSGQD-FAIQQVVATVVACVGQPVLSLARTFMGHNVAAHGMV--NIREH---------VERGEIALHDQASWILLSSQCLGGISRAASLVSPPFRHLYNRVWKGTTLPLAPTIPEAASVAIRTAVVPPSPSLDNAPRTTSDLPEGFENIQLFQQ--------YHVT-------ERDWQRLQEWWRSTDVIIPFFGASGSGKSTTLNRLCLEAGGVGNIPTGGGVNNSTSPVLIPF--FDDCEG-----RVFLLDWPGFGAERLVRNEAFIRGLRKTMEM--LYDKIVCAVYIASELPLD 510          
The following BLAST results are available for this feature:
BLAST of Gcaud6992.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0G4IC70_9ALVE1.190e-1322.20Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A2P6NY54_9EUKA8.960e-622.48Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 108..258
e-value: 5.7E-11
score: 44.0
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 145..243
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 444..563
e-value: 2.1E-6
score: 27.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 424..618
e-value: 7.3E-10
score: 40.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 439..651
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..772
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..48
NoneNo IPR availableCDDcd00741Lipasecoord: 177..289
e-value: 1.02298E-7
score: 50.1916
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
NoneNo IPR availableTMHMMTMhelixcoord: 711..733
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_75_length_56064_cov_4.301592contigNODE_75_length_56064_cov_4.301592:1044..3362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6992.t1Gcaud6992.t1Gracilaria caudata M_176_S67 malemRNANODE_75_length_56064_cov_4.301592 1044..3362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6992.t1 ID=Gcaud6992.t1|Name=Gcaud6992.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=773bp
MATPSVPMPLFTALAPAFGYGLTVFQFLLLALCTFATLVIFSLVLTLLPS
KNKPPPPFERSVLSTLARLCSVTYGRPRYTGHGNRRVIVVEPLPARVEKR
DDGRLRVTARCDIEPRKSHFKIVDTYRNSSVWLFDTKGKSSVVDARWVVA
FRGTSVLKDLLTDAELAASVATDRDIGIEKAFDKIAALLTKVFSEHKVSR
SDSIQLIGHSLGASVAEAMLLRLKKDGYSSVLACGFDSPGLPQWYRDGYE
AQDVYRSRPLTLVYMVDNFINNLTPAPPGASCFRVNKVEPLDYLNVLNFI
KTALKNGVSLIDMIKGSIDEHRNLEKMADLIDDGYFEHDEETSGRDVSGQ
VLRFIYRAYCSIVYRGASKGDPAPKDAHSIRTADAATESKAKTAGSEFSE
FPDVETALQAFYDKRGGQPTPYAVTNFHAFANKLDAQRDIVCPFIGVTSV
GKTSLLKAIFNLAPDDNLLRVSAVMDTTTTDTVLLWKVLDDEEDKGNTVR
LWLMDMPGVHGSAAGHKASSAKDMRLRSQLYAMKEMVQAAVYVTGTNPND
EAKRLFREVCEVLGDRVLVVHNVLHTVRQNQERNRLRKESQNEYRAILQE
VMGKSVGALHVVLAKVARCNGATENDLQDEMGVSELRSLLSEWLRRRRLD
IWNAVQREKYTTVGWYWMHVTEWAWWSNYRRQTGRESGELECQGSSVAPA
AKIGLGSVAVGVGWAVAGAPATVAIGTCGVVCVMMMAYPEIERAISLRKS
SGLHVATPESSGKTTQGPARSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR006073GTP-bd
IPR027417P-loop_NTPase