Gcaud6987.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6987.t1
Unique NameGcaud6987.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length251
Homology
BLAST of Gcaud6987.t1 vs. uniprot
Match: A0A2V3J5L0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 285 bits (728), Expect = 3.360e-94
Identity = 143/223 (64.13%), Postives = 171/223 (76.68%), Query Frame = 0
Query:   29 MKTFFVSAVLVALAACASAITTVDMCPNRCNPDRDMSERECDQPVTRRVCAVDSCSPP---EGGFICGMPEDSFIIANVHVPLVDLVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGGDDTSYGGKETTVVDIGAAYNDGAWTGSTSVAALAGWHGSEDEGDVTLKAFLRKKSDGSTVPGAVLSATVSPGHQYNCASTPVGTVDIVSAQLHTRFTL 248
            MKT    ++  ALAA A AI TVDMCPNRCN +R MS+REC   VTR VC+VDSCSPP   + GFIC MP +SFII N ++PL++ VVEYSW S QSDLDTSTRFL+ NVG+SCSP+  Y+ F GDD SYGGKE+  +D+  A+ +   +GSTSVA  AGWHG+EDEGD TLK FLRKKSD + +PGAVLS+T++PG QY CA+T VGTV IV AQ HTRFTL
Sbjct:    1 MKTII--SLFFALAATAFAIQTVDMCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTL 221          
BLAST of Gcaud6987.t1 vs. uniprot
Match: A0A2V3IDC2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC2_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 6.900e-90
Identity = 140/223 (62.78%), Postives = 168/223 (75.34%), Query Frame = 0
Query:   29 MKTFFVSAVLVALAACASAITTVDMCPNRCNPDRDMSERECDQPVTRRVCAVDSCSPP---EGGFICGMPEDSFIIANVHVPLVDLVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGGDDTSYGGKETTVVDIGAAYNDGAWTGSTSVAALAGWHGSEDEGDVTLKAFLRKKSDGSTVPGAVLSATVSPGHQYNCASTPVGTVDIVSAQLHTRFTL 248
            MKT  + ++  ALAA A AI TVDMCPNRCN +R MS+REC   VTR VCAV+SCSPP     GFIC MP++SFIIAN ++P ++ VVEYSW S QSDLDTSTRFL+ NVG+ CSP+  Y+ F GDD S GGKET  +D+  A+ +   +GSTSVAA AGWHGSE+EGD TLK FLRKKSD + + GAVLS+T+SPG Q  CA+T VGTV I+ AQ HTRF L
Sbjct:    5 MKT--IVSLFFALAATAFAIQTVDMCPNRCNANRPMSQRECSLAVTRGVCAVESCSPPAYNRTGFICKMPQNSFIIANTNLPQLEFVVEYSWSSTQSDLDTSTRFLDANVGFRCSPDKDYIAFSGDDVSSGGKETITIDVMEAFEEYQLSGSTSVAAFAGWHGSENEGDATLKVFLRKKSDQALISGAVLSSTISPGTQNGCAATAVGTVQIIRAQHHTRFAL 225          
BLAST of Gcaud6987.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 218 bits (555), Expect = 5.370e-68
Identity = 104/221 (47.06%), Postives = 146/221 (66.06%), Query Frame = 0
Query:   29 MKTFFVSAVLVALAACASAITTVDMCPNRCNPDRDMSERECDQPVTRRVCAVDSCSPPEGGFICGMPEDSFIIANVHVPLVDLVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGGDDTSYGGKETTVVDIGAAYNDGAWTGSTSVAALAGWHGSEDEGDVTLKAFLRKKSDGSTVPGAVLSATVSPGHQYNCASTPVGTVDIVSAQLHTRFTLQ 249
            M+ +FV  +L ++    +   + D+CPNRCN DR +S+RECD PVTR +CAV+ C   + G+ C MP +SF+I+N  + L++ V+EY+W   Q DLDTSTRFL+GNVG+SCS    YLDFGGD+TS GG E  V+D+  A  DG W  ST++ + AGW  S+++G   +K +LR+KSDG     A +S  ++PG Q  C+   V TV I+   LHTR TL+
Sbjct:    1 MRCYFVFFLLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECE--DNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLE 219          
BLAST of Gcaud6987.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 175 bits (443), Expect = 2.210e-50
Identity = 83/184 (45.11%), Postives = 118/184 (64.13%), Query Frame = 0
Query:   66 ERECDQPVTRRVCAVDSCSPPEGGFICGMPEDSFIIANVHVPLVDLVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGGDDTSYGGKETTVVDIGAAYNDGAWTGSTSVAALAGWHGSEDEGDVTLKAFLRKKSDGSTVPGAVLSATVSPGHQYNCASTPVGTVDIVSAQLHTRFTLQ 249
            +REC+ PVTR VCAV+ C     G+ C M  +SF+I+N  +PL++ V+EY+W   Q DLD STRFL+GNVG+ C+    YLDFGGD+TS G  E  V+D+  A  D  W  ST++ + A W  S+++G   ++ +LR+KSDG     A +S  ++PG Q NC+S  V  V I+   +HTR TL+
Sbjct:   93 DRECNHPVTRSVCAVEECE--NNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLE 274          
BLAST of Gcaud6987.t1 vs. uniprot
Match: A0A2V3IS72_9FLOR (VWFD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS72_9FLOR)

HSP 1 Score: 142 bits (357), Expect = 8.560e-35
Identity = 81/160 (50.62%), Postives = 100/160 (62.50%), Query Frame = 0
Query:   79 AVDSCSPPEG-GFICGMPEDSFIIANVHVPLVDLVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGGDDTSYGGKETTVVDIGAAYNDGAWTGSTSVAALAGWHGSEDEGDVTLKAFLRKKSDGSTVPGAVLSATVSPGHQYNCASTPVGTVDI 237
            AV S S   G G +      S  + N      DLVV+Y+WGS QSDLDT TRFL+G VG+ CSP+ Q++ F GD+T  GG ET VV + AA   G WT ST+V A AGW+    +G  TL+ FLR+    S V G+ LS+ VSPG Q NCAST VGTV+I
Sbjct: 1041 AVRSYSSQSGIGVVVDSNITSVSVPNQQFEAYDLVVKYTWGSDQSDLDTGTRFLDGIVGFRCSPSGQFMTFSGDNTGTGGSETIVVRVNAARAQGLWTSSTNVTANAGWY-RRAQGPATLRVFLRENDTLSEVSGSGLSSVVSPGVQSNCASTLVGTVNI 1199          
BLAST of Gcaud6987.t1 vs. uniprot
Match: A0A2V0PBI5_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PBI5_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 6.240e-16
Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 0
Query:  111 LVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGGDDTSYGGKETTVVDIGAAYNDGAWTGSTS--VAALAGWHG-SEDEGDVTLKAFLRKKSDGSTVPGAVLSAT--VSPGHQYNCA 228
            L V Y W + Q DL+T T +L G VG+ C  ++ Y+ +GGD+ SYGGKET  VD+ AA+ DG W  ST+  + A AGWH  S   G +TL   L    D + V  A+      V PG Q++CA
Sbjct:  318 LRVTYKWAAYQKDLNTGTGWLGGAVGYECGTSS-YMVWGGDNNSYGGKETVTVDVAAAFRDGQWNASTNNEIIADAGWHAPSRGTGPITLVVELL---DTNGVARAIEGGERGVIPGRQFSCA 436          
The following BLAST results are available for this feature:
BLAST of Gcaud6987.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J5L0_9FLOR3.360e-9464.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDC2_9FLOR6.900e-9062.78Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J6U1_9FLOR5.370e-6847.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR2.210e-5045.11Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IS72_9FLOR8.560e-3550.63VWFD domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V0PBI5_9CHLO6.240e-1643.09Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_392_length_27014_cov_4.481484contigNODE_392_length_27014_cov_4.481484:15096..16054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6987.t1Gcaud6987.t1Gracilaria caudata M_176_S67 malemRNANODE_392_length_27014_cov_4.481484 15096..16054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6987.t1 ID=Gcaud6987.t1|Name=Gcaud6987.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=251bp
LDKYFLDWGTRHHCNTAAFNQSFSDQATMKTFFVSAVLVALAACASAITT
VDMCPNRCNPDRDMSERECDQPVTRRVCAVDSCSPPEGGFICGMPEDSFI
IANVHVPLVDLVVEYSWGSGQSDLDTSTRFLNGNVGWSCSPNTQYLDFGG
DDTSYGGKETTVVDIGAAYNDGAWTGSTSVAALAGWHGSEDEGDVTLKAF
LRKKSDGSTVPGAVLSATVSPGHQYNCASTPVGTVDIVSAQLHTRFTLQA
*
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