Gcaud6986.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6986.t1
Unique NameGcaud6986.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length221
Homology
BLAST of Gcaud6986.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 304 bits (778), Expect = 2.390e-102
Identity = 146/221 (66.06%), Postives = 177/221 (80.09%), Query Frame = 0
Query:    1 MKFFYTVLFLAMLMPVFAQHTSNHVCPNRCNADRTLSVRECNQPVTRTLCEVKECA-NGFSCSLPGNSFLIANIQLQQVEMVVEYSWSPEQRDLDTSTRFLTANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVIANAGWFNSDNQGSAQMKVSLRRKSDGGVVPGAALSDRIHPGTQRDCSSTKVAEVKIVRGSLHTRVTLELA 220
            M+ ++    LA ++P+ AQH SN VCPNRCN DRTLS REC+ PVTR+LC V+EC  NG+SCS+PGNSF+I+N QL  +E V+EY+WSPEQRDLDTSTRFL  NVG+SC+  + Y+ FGGDNTS GG+EV VID +KA +DG W  ST++I+NAGWF SDNQG AQMKV LRRKSDGG+   A++SDRI+PGTQR CS   VA VKI+RGSLHTRVTLE A
Sbjct:    1 MRCYFVFFLLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEKA 221          
BLAST of Gcaud6986.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 246 bits (629), Expect = 6.440e-79
Identity = 119/183 (65.03%), Postives = 147/183 (80.33%), Query Frame = 0
Query:   39 RECNQPVTRTLCEVKECAN-GFSCSLPGNSFLIANIQLQQVEMVVEYSWSPEQRDLDTSTRFLTANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVIANAGWFNSDNQGSAQMKVSLRRKSDGGVVPGAALSDRIHPGTQRDCSSTKVAEVKIVRGSLHTRVTLELA 220
            RECN PVTR++C V+EC N G+SCS+ GNSF+I+N QL  +E V+EY+WSPEQRDLD STRFL  NVG+ CT  + Y+ FGGDNTS+G +EV VID +KA +D  W  ST++I+NA WF SDNQG AQM+V LRRKSDGG+   A++SDRI+PGTQ +CSS KVA VKI+RGS+HTRVTLE A
Sbjct:   94 RECNHPVTRSVCAVEECENNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLEKA 276          
BLAST of Gcaud6986.t1 vs. uniprot
Match: A0A2V3IDC2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC2_9FLOR)

HSP 1 Score: 211 bits (538), Expect = 8.580e-66
Identity = 111/216 (51.39%), Postives = 139/216 (64.35%), Query Frame = 0
Query:    8 LFLAMLMPVFAQHTSNHVCPNRCNADRTLSVRECNQPVTRTLCEVKECA------NGFSCSLPGNSFLIANIQLQQVEMVVEYSWSPEQRDLDTSTRFLTANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVIANAGWFNSDNQGSAQMKVSLRRKSDGGVVPGAALSDRIHPGTQRDCSSTKVAEVKIVRGSLHTRVTL 217
            LF A+    FA  T + +CPNRCNA+R +S REC+  VTR +C V+ C+       GF C +P NSF+IAN  L Q+E VVEYSWS  Q DLDTSTRFL ANVG+ C+P   Y+ F GD+ S GG E   ID  +A  +   SGSTSV A AGW  S+N+G A +KV LR+KSD  ++ GA LS  I PGTQ  C++T V  V+I+R   HTR  L
Sbjct:   11 LFFALAATAFAIQTVD-MCPNRCNANRPMSQRECSLAVTRGVCAVESCSPPAYNRTGFICKMPQNSFIIANTNLPQLEFVVEYSWSSTQSDLDTSTRFLDANVGFRCSPDKDYIAFSGDDVSSGGKETITIDVMEAFEEYQLSGSTSVAAFAGWHGSENEGDATLKVFLRKKSDQALISGAVLSSTISPGTQNGCAATAVGTVQIIRAQHHTRFAL 225          
BLAST of Gcaud6986.t1 vs. uniprot
Match: A0A2V3J5L0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 209 bits (532), Expect = 6.120e-65
Identity = 111/216 (51.39%), Postives = 139/216 (64.35%), Query Frame = 0
Query:    8 LFLAMLMPVFAQHTSNHVCPNRCNADRTLSVRECNQPVTRTLCEVKECA------NGFSCSLPGNSFLIANIQLQQVEMVVEYSWSPEQRDLDTSTRFLTANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVIANAGWFNSDNQGSAQMKVSLRRKSDGGVVPGAALSDRIHPGTQRDCSSTKVAEVKIVRGSLHTRVTL 217
            LF A+    FA  T + +CPNRCN +R +S REC+  VTR +C V  C+       GF C +P NSF+I N  L  +E VVEYSWS  Q DLDTSTRFL ANVGYSC+P   YV F GD+ S+GG E   ID  +A  +   SGSTSV   AGW  ++++G A +KV LR+KSD  ++PGA LS  I+PGTQ  C++T V  V+IVR   HTR TL
Sbjct:    7 LFFALAATAFAIQTVD-MCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTL 221          
BLAST of Gcaud6986.t1 vs. uniprot
Match: A0A2V3IS11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 185 bits (470), Expect = 1.520e-55
Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 0
Query:   25 VCPNRCNADRTLSVRECNQPVTRTLCEVKECA------NGFSCSLPGNSFLIANIQLQQVEMVVEYSWSPEQRDLDTSTRFLTANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVIANAGWFNSDNQGSAQMKVSLRRKSDGGVVPGAALSDRIHPGTQRDCSSTKVAEVKIVRGSLHTRVTLE 218
            +CPN+C  +  + +REC +     LC V+ C+      NGFSCSLP  SFL+ N +L Q EMV+ Y W   +RDLDTSTRFL ANVG+ C   S+Y+++ GD++ +GG E  V+DFDKA RDG W+G TS+  +AGW  S  QG A + V +RR  +     G  L   I+PGTQR CS  +VA VKI RG   TRVTL+
Sbjct:   26 ICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDN--HEEGNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTLD 223          
BLAST of Gcaud6986.t1 vs. uniprot
Match: A0A7R9WQ56_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQ56_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.010e-17
Identity = 59/147 (40.14%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   75 LQQVEMVVEYSWSPEQRDLDTSTRFLTANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVIANAGWFNSD-NQGSAQMKV---SLRRKSDGGVVPGAALSDRIHPGTQRDCSSTKVAEVKIVRGSLHTRVTL 217
            + ++ +VVEYSW  +Q DLDT T FL   VGY C   S Y+ F GD+T+ GGSE   I    A+ +G W  ST V  NA WF+S    G A + V   SL + S G  V   A S  I+PG    C+ST  A   +       RV +
Sbjct: 1178 IDELVIVVEYSWPADQSDLDTGTIFLDGAVGYDCGA-SPYMSFSGDSTATGGSETVKIRVGDAYNNGDWVDSTIVDMNADWFSSAMGSGPASLTVFIESLDQGSGGQTVVSPAYSFVINPGMGSGCASTDAAVALVTLNEDDGRVVI 1323          
The following BLAST results are available for this feature:
BLAST of Gcaud6986.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J6U1_9FLOR2.390e-10266.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR6.440e-7965.03Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IDC2_9FLOR8.580e-6651.39Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J5L0_9FLOR6.120e-6551.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS11_9FLOR1.520e-5548.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7R9WQ56_9STRA1.010e-1740.14Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_392_length_27014_cov_4.481484contigNODE_392_length_27014_cov_4.481484:12614..13276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6986.t1Gcaud6986.t1Gracilaria caudata M_176_S67 malemRNANODE_392_length_27014_cov_4.481484 12614..13276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6986.t1 ID=Gcaud6986.t1|Name=Gcaud6986.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=221bp
MKFFYTVLFLAMLMPVFAQHTSNHVCPNRCNADRTLSVRECNQPVTRTLC
EVKECANGFSCSLPGNSFLIANIQLQQVEMVVEYSWSPEQRDLDTSTRFL
TANVGYSCTPTSQYVQFGGDNTSHGGSEVTVIDFDKAHRDGAWSGSTSVI
ANAGWFNSDNQGSAQMKVSLRRKSDGGVVPGAALSDRIHPGTQRDCSSTK
VAEVKIVRGSLHTRVTLELA*
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