Gcaud6941.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6941.t1
Unique NameGcaud6941.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length676
Homology
BLAST of Gcaud6941.t1 vs. uniprot
Match: A0A2V3J5H1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H1_9FLOR)

HSP 1 Score: 670 bits (1729), Expect = 1.480e-232
Identity = 407/688 (59.16%), Postives = 478/688 (69.48%), Query Frame = 0
Query:    9 DASGAASGLDRYAPNTSLPLLVRMPDGEDHQVDVPSNALVKDLKTTIANIPWQPSGSDPQPQSLELEFDGETLNENETLSHYNIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMARLISAVFDDINEDTPASPSAQPSLSAMKRSRISRIPSLNLGALNSLGTDGKSASKLFSPSAPPTPRLLMRKLSLMRPDLYDTEAVEKATSSFSLGNLAGLSNNMPARVGDSQNPESGELKRGNTWFHDIMTSINTSLRDPRKGGAANRDNQD---DIEGDSEGEDDVGTDEGNISADANASRPATAGGALEFGGTTKQ-----------GSASMTGKD--ENRSSATAMKEDKPVTSSSGEAKGNAIAVQGATAVGPTGSKPDLSKDSTTATPVAADSNPTEKQETKQNSTVASNANLRTPQRQATPSSSSNTVVPSRPIANHDKQVIGLTPERQP---AGDEVKQPKKRGRKRKNPHLTEEQRKAQRQAQNRESAKLSRIRRKNMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQVHPSMMPP-STAAIGQGPQNRLNAAINPHVPMGGQPGIASQAGLVSRALNAQALLGNQNVMARAGATSHPGLVHAQNALSSQRP-LNANEALVGRTQALTGSRPLGPNAPSQSNPLTNFRYKNF 675
            ++S  A+ LDRY    SLPLLVRMPDGE+HQVDVP NA VKDLKT+IAN+PWQ S SDPQ QSLELEF GETLN+N+TLSHYNIPEVYDHADGFLKTISDSGYLD +KKVEALDKACAVVRGISRGEKDM RL+ AVFDD+++DTP SPSAQPSL +M+RSR SRIPSLN GALN +G  G+S S+LFSPSAPPTPR LMRKLSL+RPDLYDT A EKATSS SL     + N    R  +SQ+  +GELKRGNTWF DIMT+IN+S RDPRK G  N D+QD   D+EG+SEGE+   +++     D NAS  A +   +E G   KQ           G+AS  G       +    +K ++   SS  +AK +A     +         P+ S     A P + D   T    T Q S             Q  PSS+S  V+P RPI N DKQVIGLTPERQ    A  E + P++RGRKRKNPHL+EE+RKAQ  AQNRESAKLSRIRRK+MT+EYE+RVN+LEGENENLR TIS LEDRLQMLQNLLTI+VQRR+IPQVHPSMMPP S A +  G QNRL+AA+  +V       IA Q GLV  ALNAQA+L NQ+VM RAG + H G++  Q   SSQRP +N N  ++G  Q L GS P+  +  SQSNPL N RYK F
Sbjct:    7 NSSSGAAALDRYGAGASLPLLVRMPDGENHQVDVPPNASVKDLKTSIANLPWQLSDSDPQQQSLELEFGGETLNDNQTLSHYNIPEVYDHADGFLKTISDSGYLDHEKKVEALDKACAVVRGISRGEKDMERLLGAVFDDLHDDTPGSPSAQPSLRSMRRSRPSRIPSLNFGALNPIGVGGRSNSRLFSPSAPPTPRQLMRKLSLLRPDLYDTAAAEKATSSLSLAIPTNIGNKSAVRANESQSQGNGELKRGNTWFQDIMTTINSSHRDPRKRGDLNDDDQDHGDDVEGNSEGEN---SEDLEALTDPNASG-AKSSTLVELGDILKQSTSPTNSIKTDGTASQPGTSLVSKPTQNDQLKFNEQQQSSVDDAKSSAAPAGDSALTTKAQGGPEKSLKVEGALPTSTDGKGT----TNQGSAS-----------QPPPSSNSTKVIPGRPIPNQDKQVIGLTPERQTPATASQEPRLPRRRGRKRKNPHLSEEERKAQXXAQNRESAKLSRIRRKHMTLEYERRVNSLEGENENLRGTISALEDRLQMLQNLLTISVQRRAIPQVHPSMMPPQSNAPMLPGGQNRLSAALGTNVS------IAGQQGLVPGALNAQAMLANQSVMGRAGISLHGGMMQTQVPGSSQRPPINTNGTMMGAPQTLPGSAPMRQSGSSQSNPLANLRYKTF 669          
BLAST of Gcaud6941.t1 vs. uniprot
Match: A0A1X6P6M8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6M8_PORUM)

HSP 1 Score: 79.3 bits (194), Expect = 1.440e-11
Identity = 50/123 (40.65%), Postives = 71/123 (57.72%), Query Frame = 0
Query:   25 SLPLLVRMPDGEDHQVDVPSNALVKDLKTTIANIPWQPSGSDPQPQSLE---LEFDGETLNENET-LSHYNIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMARLIS 143
            S+PLLVR+P GE  Q+DVP++A V D++  IA      + S   P ++E   L++ G  LN+    L  Y+IP+ YD A G L+ I   G   P     A+D A AVV   SRGE++M RL++
Sbjct:  121 SIPLLVRLPSGEKTQLDVPADATVGDVRRRIA------AASPEMPAAMEGVRLQWAGTELNDPAAALDDYHIPDTYDQAFGLLRAIDSRGA--PGVTAAAMDTAVAVVSSASRGERNMERLVA 235          
BLAST of Gcaud6941.t1 vs. uniprot
Match: M2XXC4_GALSU (BZIP transcription factor isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXC4_GALSU)

HSP 1 Score: 77.8 bits (190), Expect = 2.220e-11
Identity = 135/528 (25.57%), Postives = 212/528 (40.15%), Query Frame = 0
Query:   25 SLPLLVRMPDGEDHQVDVPSNALVKDLKTTIANIPWQPSGSDPQPQSLELEFDGETLNENETLSHYNIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMARLISAVFDD--INEDTPASPSA----QPSLSAMKRSRISRIPSL--NLGALNSLGTDGKSA----SKLFSPSAPPTPRLLMRKLSLMRPDLYDT------EAVEKATSSF-SLGNLAGLSNNMPARVGDSQNPESGELKRGNTWFHDIMTSINTSLRDPRKGGAANRDNQDDIEGDSEGEDDVGTDEGNISADANASRPATAGGALEFGGTTKQGSASMTGKDENRSSATAMKEDKPVTSSSGEAKGNAIAVQGATAVGPTGSKPDLSKDSTTATPVAADSNPTEKQETKQNSTVASNANLRTPQRQATPSSSSNTVVPSRPIANHDKQVIGLTPERQPAGDEVKQPKKRGRKRKNPHLTEEQRKAQRQAQNRESAKLSRIRRKNMTMEYEKRVNTLEGENENLRDTISGLED 533
            + PLL+ +PDG+  Q+ V     + D+K  +                L   F    L +N+TL  Y IPE+Y+  +  L+ I + G LDP KK EAL++ C VV  +  G  D   L+S V  D  I E    + +A    Q S S   +S + + P+   +  ++   G    SA    S + S +    P ++  KL L R D  +T      +   + T  F  L    GLS+     +     P +    R +T FH   +S+ +S  D                         GT++ +    + A +        EF       + ++  +D N  S           SS  ++  N+         G       +S DS+        S+  E  E K      + +         T S+ +N  +    I+N +K              E +  K+RGRKRK+P +TEE+RKA R  QNR SA+ SR R+K     Y+KR+  L  EN+ LR T+  L++
Sbjct:    7 TFPLLLDLPDGQRRQLQVSVYDTIGDVKKKLCE-------EFHFIDMLHFHFGNIELQDNKTLYDYGIPEIYEQTESLLRMI-ELGGLDPQKKPEALERMCIVVESMKNGVTDPKELVSVVKRDSKITETNARTGNANRHEQSSCSKQAQSNVVQPPTSPRSFTSVTKQGNSQTSAVGFHSAVSSSNVDTKPSIISPKLPLERLDEPNTLVDNNDDLFARLTDYFPDLFTPKGLSS-----LRSGATPRAWTTPR-DTGFHMEESSLVSSPVDWV----------------------TGTNDNHSLLGSQAIKDNAPNWIREF-----TSNWNVLPQDRNEKSPKRRSRQTEANSSVYDSFQNS---------GDEHENLSVSNDSS--------SDREELLECKSGEYSTNQSTYSGSHSDNTNSNHNNPTLDDDHISNMEKH-------------ETRTVKRRGRKRKHPEMTEEERKAYRAMQNRRSAERSRQRKKIQQEAYQKRMEELCTENDELRSTVQALQE 463          
BLAST of Gcaud6941.t1 vs. uniprot
Match: A0A7S1T822_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T822_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 9.150e-11
Identity = 40/84 (47.62%), Postives = 62/84 (73.81%), Query Frame = 0
Query:  467 PKKRGRKRKNPHLTEEQRKAQRQAQNRESAKLSRIRRKNMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS 550
            P+KRGRKRK PHLTEE+R+  R+ +NRESA+ SR R++N+  +YE ++  +  EN++L   +S L +RL+ L+ +LT+ V+ RS
Sbjct:  388 PRKRGRKRKFPHLTEEERRTMRRDRNRESARRSRDRKRNIQKQYESKITAVRKENDSLEGQVSALSNRLEFLKQILTVHVRSRS 471          
BLAST of Gcaud6941.t1 vs. uniprot
Match: A0A2V3ITI3_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI3_9FLOR)

HSP 1 Score: 67.4 bits (163), Expect = 6.820e-10
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  468 KKRGRKRKNPHLTEEQRKAQRQAQNRESAKLSRIRRKNMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQ 547
            KKRGRK KNP LT+E+R   R+ QN E AKLSR+RRK    EYE  +N L  EN  L+  +   E+RL  +Q+LLT++VQ
Sbjct:   30 KKRGRKCKNPELTDEERVLWRKQQNTEGAKLSRVRRKVNGAEYESNLNVLINENTMLKKQVDEHENRLACMQSLLTVSVQ 109          
BLAST of Gcaud6941.t1 vs. uniprot
Match: A0A7S0T7X4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7X4_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 5.710e-9
Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 0
Query:  460 AGDEVKQPKKRGRKRKNPHLTEEQRKAQRQAQNRESAKLSRIRRKNMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITV 546
            AGD +K PKKRGRKRKNP LT+ QR  +R+ QNR SAK SR ++K  T+E+ +R+ T+  EN++L+  +  L  RL ++Q LL + V
Sbjct:  220 AGD-LKVPKKRGRKRKNPQLTDAQRMEERKMQNRASAKKSREKKKVQTVEHVQRIETILHENQSLKAELEHLGKRLDLMQQLLAVQV 305          
The following BLAST results are available for this feature:
BLAST of Gcaud6941.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J5H1_9FLOR1.480e-23259.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P6M8_PORUM1.440e-1140.65Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2XXC4_GALSU2.220e-1125.57BZIP transcription factor isoform 1 n=2 Tax=Galdie... [more]
A0A7S1T822_9RHOD9.150e-1147.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3ITI3_9FLOR6.820e-1052.50BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S0T7X4_9RHOD5.710e-949.43Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 507..541
NoneNo IPR availableGENE3D3.10.20.90coord: 23..99
e-value: 2.8E-7
score: 32.1
NoneNo IPR availableGENE3D1.20.5.170coord: 482..539
e-value: 8.6E-9
score: 37.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..263
NoneNo IPR availableCDDcd14686bZIPcoord: 485..536
e-value: 8.35266E-10
score: 52.9329
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 28..92
e-value: 4.50252E-7
score: 45.665
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 484..542
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 480..544
e-value: 9.8E-9
score: 45.0
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 481..539
e-value: 1.5E-9
score: 37.8
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 482..545
score: 10.920987
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 26..94
score: 11.790588
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 19..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_134_length_45310_cov_4.791305contigNODE_134_length_45310_cov_4.791305:5263..7290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6941.t1Gcaud6941.t1Gracilaria caudata M_176_S67 malemRNANODE_134_length_45310_cov_4.791305 5263..7290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6941.t1 ID=Gcaud6941.t1|Name=Gcaud6941.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=676bp
MSHKNAASDASGAASGLDRYAPNTSLPLLVRMPDGEDHQVDVPSNALVKD
LKTTIANIPWQPSGSDPQPQSLELEFDGETLNENETLSHYNIPEVYDHAD
GFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMARLISAVFDDIN
EDTPASPSAQPSLSAMKRSRISRIPSLNLGALNSLGTDGKSASKLFSPSA
PPTPRLLMRKLSLMRPDLYDTEAVEKATSSFSLGNLAGLSNNMPARVGDS
QNPESGELKRGNTWFHDIMTSINTSLRDPRKGGAANRDNQDDIEGDSEGE
DDVGTDEGNISADANASRPATAGGALEFGGTTKQGSASMTGKDENRSSAT
AMKEDKPVTSSSGEAKGNAIAVQGATAVGPTGSKPDLSKDSTTATPVAAD
SNPTEKQETKQNSTVASNANLRTPQRQATPSSSSNTVVPSRPIANHDKQV
IGLTPERQPAGDEVKQPKKRGRKRKNPHLTEEQRKAQRQAQNRESAKLSR
IRRKNMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS
IPQVHPSMMPPSTAAIGQGPQNRLNAAINPHVPMGGQPGIASQAGLVSRA
LNAQALLGNQNVMARAGATSHPGLVHAQNALSSQRPLNANEALVGRTQAL
TGSRPLGPNAPSQSNPLTNFRYKNF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf