Gcaud6902.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6902.t1
Unique NameGcaud6902.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length149
Homology
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A2V3J625_9FLOR (40S ribosomal protein S10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J625_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 3.070e-97
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIRND 148
            ML+PKKNRVAIYSQLFKDGVCVVKKD MLKEHLE+K++PNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALG RGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIR D
Sbjct:    1 MLIPKKNRVAIYSQLFKDGVCVVKKDSMLKEHLEMKEIPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALG-RGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIRKD 147          
BLAST of Gcaud6902.t1 vs. uniprot
Match: R7Q7A5_CHOCR (S10_plectin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7A5_CHOCR)

HSP 1 Score: 240 bits (612), Expect = 2.050e-79
Identity = 124/147 (84.35%), Postives = 133/147 (90.48%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGG-FGRGGPIR 146
            MLMPKK+RVAIYSQ+FKDGVCVVKKDPMLK+H EI DV NLHVMQTMKSL+SREYVRETFSWQYYYYYLTDEGIEYLRS+LNLP +VKP+TL PPPRQP RSAL GRGDR R+   DGGDKKMGP GDFRPSYREGGG FGRG P+R
Sbjct:    1 MLMPKKDRVAIYSQIFKDGVCVVKKDPMLKKHAEI-DVKNLHVMQTMKSLKSREYVRETFSWQYYYYYLTDEGIEYLRSFLNLPGSVKPSTLTPPPRQPPRSALAGRGDRSRKY--DGGDKKMGPEGDFRPSYREGGGGFGRGAPLR 144          
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A1X6NMW1_PORUM (S10_plectin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMW1_PORUM)

HSP 1 Score: 155 bits (392), Expect = 1.580e-45
Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRG-------DRPRRSYGDGGDKKMGPGGDFRPSYREGG 137
            ML+PKK+R+A+YSQLFKDGV V K+D   K H+++KDVPNL+V++ M+SL+SREYV + FSW YYYY+LTD GIEYLR YLNLP+ + P TL  P R P     G  G                  DKKMGPGG+FRP+YREGG
Sbjct:    1 MLVPKKDRIAVYSQLFKDGVMVAKEDLGAKRHIDLKDVPNLYVVKLMQSLKSREYVTKQFSWCYYYYFLTDSGIEYLRGYLNLPAEIIPATLKKPTRAPGGPMGGPPGAXXXXXXXXXXXXXXXXXDKKMGPGGEFRPAYREGG 144          
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A7S2XYZ3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.300e-45
Identity = 86/143 (60.14%), Postives = 100/143 (69.93%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGG 143
            M + K NR+A+YS LFK+GV V KKD    +H EI DVPNL VM  MKS +SR  VRETF+WQYYYYYLT+EGIEYLR YL+LP+ V P TL  P  +PAR   G  G+R    +GD G K+MGP GDF P Y   GGFGRGG
Sbjct:    1 MFVTKTNRLAVYSYLFKEGVLVCKKDNFKPKHDEI-DVPNLEVMNLMKSFKSRGLVRETFNWQYYYYYLTNEGIEYLREYLHLPAEVVPATLKKPAPKPARPGPGPGGERGESRFGDKG-KRMGPAGDFNPEYA--GGFGRGG 139          
BLAST of Gcaud6902.t1 vs. uniprot
Match: D7G639_ECTSI (S10_plectin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G639_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 5.570e-45
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARS--ALGGRGDRPRRSYGDGGD----KKMGPGGDFRPS--------YREGGGFGRGG 143
            M + KKNR+A+YS LFK+GV V KKD    +H EI+DVPNL V+  MKS++SR  VRETF+WQY+Y+YLT EGIEYLR YL+LP  + P TL     +PAR   A GG  D  R  YG  GD    KKMGPGGDF P         YR GGGFGRGG
Sbjct:    1 MFILKKNRLAVYSYLFKEGVLVAKKDFFKAKHDEIEDVPNLEVLALMKSMKSRGLVRETFNWQYFYWYLTVEGIEYLREYLHLPEEIVPATLKKSASRPARPGPAPGGDRDGGRGGYGGXGDRFGDKKMGPGGDFNPEFQRGGQDGYRRGGGFGRGG 157          
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A7S2ZAK4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAK4_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 2.110e-42
Identity = 81/145 (55.86%), Postives = 98/145 (67.59%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDG-GDKKMGPGGDFRPSYREGGG--FGRG 142
            ML+PKK RV +Y QLFKDGV V  KD  L  H ++ DVPNLHV++ M+SL+SR YV+E FSWQY+YY+LT++GI+YL+ YLN P  VKP T                G      +G G G+KKMGPGGDFRP YREGGG  FGRG
Sbjct:    1 MLLPKKTRVEVYKQLFKDGVMVAPKDYNLPSHKDV-DVPNLHVLKLMQSLKSRGYVKEVFSWQYFYYFLTEDGIQYLQGYLNYPDNVKPDTTKKQXXXXXXXXXXXXGXX----FGGGFGEKKMGPGGDFRPEYREGGGRGFGRG 140          
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A835YL06_9STRA (Plectin/S10 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL06_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.170e-40
Identity = 81/155 (52.26%), Postives = 99/155 (63.87%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDG-GDKKMGPGGDFRPSYREG-------GGFGRGGPIRN 147
            M + KKNR+ +Y  LF++GV V KKD     H +I DVPNL V+  MKS+RSR+ VRETF+WQ+YYYYLT  GIEYLR YL+LP    P TL  P  +PAR+     G  P  S G   GDKKMGPGGDF+P +++         GFGRGG   N
Sbjct:    1 MFILKKNRILVYQYLFQEGVLVAKKDFYQPAHEDIPDVPNLEVLCLMKSMRSRQLVRETFNWQHYYYYLTAAGIEYLREYLHLPEETIPATLKKPAARPARA-----GPVPGESAGGRYGDKKMGPGGDFQPEFQQSRDDGYRRSGFGRGGGAGN 150          
BLAST of Gcaud6902.t1 vs. uniprot
Match: UPI000A2A920E (40S ribosomal protein S10 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920E)

HSP 1 Score: 140 bits (353), Expect = 9.010e-40
Identity = 84/159 (52.83%), Postives = 104/159 (65.41%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSAL----------GGRG----DRPRRSYGD-GGDKKMGPGGDFRPSYREGGGFGRGGP 144
            ML+PKKNR+AIY  LFK+GVCV KKD    +H +I++VPNLHV ++MKSL+SR YV E FSW+YYY+YLT+EGI YLR YL+LP  + P+TL    RQ  R+            G RG    DR     G  GGD K G G DF+P +R  GG+GRG P
Sbjct:    1 MLIPKKNRIAIYEYLFKEGVCVAKKDRNNPKHKDIENVPNLHVTESMKSLKSRGYVTEQFSWKYYYWYLTNEGITYLRDYLHLPPEIVPSTLR---RQTTRAETARPRPKGMDSGPRGPDSSDRDTYRRGPPGGDPKGGAGTDFKPEFR--GGYGRGRP 154          
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A250X7M3_9CHLO (S10_plectin domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X7M3_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 5.000e-39
Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGG 143
            ML+PKKNR  +Y  LFK+GV   +KD  L++H EIK+VPNL V++ M+S +S+E V E +SW+YYY++LTD+GIEYLR YLNLPS + P TL    R   R+    R DRP R Y DG  ++      +R   REGGGFGRGG
Sbjct:    1 MLIPKKNRREVYKYLFKEGVLYAEKDFNLEQHPEIKEVPNLQVLKLMQSFKSQELVTERYSWRYYYWFLTDKGIEYLREYLNLPSEIVPATLKKSTRPLERTTGPQRPDRPPRRYEDGQGREG-----YRSGPREGGGFGRGG 138          
BLAST of Gcaud6902.t1 vs. uniprot
Match: A0A024TKD5_9STRA (S10_plectin domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TKD5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 5.690e-39
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0
Query:    1 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYR 134
            ML+PKKNR+A+YS LFK+GV V KKD    +H ++ DVPNL V++ M+SL SR YV+ETF+WQ+YY+YLT EGIEYLR+YL+LP+ + P TL     +P R      G      YG G DK +GP GDF P +R
Sbjct:    1 MLVPKKNRIAVYSYLFKEGVMVGKKDFFAPKHGDV-DVPNLQVIKLMQSLHSRGYVKETFNWQWYYWYLTAEGIEYLRAYLHLPTEIVPATLKKQAARPQRPQAPSAG-----GYGRGKDKNLGPSGDFNPEFR 128          
The following BLAST results are available for this feature:
BLAST of Gcaud6902.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J625_9FLOR3.070e-9795.2740S ribosomal protein S10 n=1 Tax=Gracilariopsis c... [more]
R7Q7A5_CHOCR2.050e-7984.35S10_plectin domain-containing protein n=1 Tax=Chon... [more]
A0A1X6NMW1_PORUM1.580e-4556.25S10_plectin domain-containing protein n=1 Tax=Porp... [more]
A0A7S2XYZ3_9STRA4.300e-4560.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7G639_ECTSI5.570e-4556.69S10_plectin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2ZAK4_9RHOD2.110e-4255.86Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A835YL06_9STRA4.170e-4052.26Plectin/S10 domain-containing protein n=1 Tax=Trib... [more]
UPI000A2A920E9.010e-4052.8340S ribosomal protein S10 n=1 Tax=Exaiptasia diaph... [more]
A0A250X7M3_9CHLO5.000e-3952.45S10_plectin domain-containing protein n=1 Tax=Chla... [more]
A0A024TKD5_9STRA5.690e-3953.73S10_plectin domain-containing protein n=3 Tax=Apha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005326Plectin/S10, N-terminalPFAMPF03501S10_plectincoord: 3..93
e-value: 3.5E-40
score: 136.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..104
e-value: 1.6E-42
score: 145.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..148
IPR03744740S Ribosomal protein S10PANTHERPTHR1214640S RIBOSOMAL PROTEIN S10coord: 1..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1351_length_11210_cov_3.989927contigNODE_1351_length_11210_cov_3.989927:5119..5565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6902.t1Gcaud6902.t1Gracilaria caudata M_176_S67 malemRNANODE_1351_length_11210_cov_3.989927 5119..5565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6902.t1 ID=Gcaud6902.t1|Name=Gcaud6902.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=149bp
MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSL
RSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPA
RSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIRND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005326S10_plectin_N
IPR036388WH-like_DNA-bd_sf
IPR037447Rps10