Gcaud6895.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6895.t1
Unique NameGcaud6895.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length460
Homology
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BLAST of Gcaud6895.t1 vs. uniprot
Match: A0A2V3ISX1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX1_9FLOR)

HSP 1 Score: 434 bits (1116), Expect = 2.880e-146
Identity = 225/463 (48.60%), Postives = 310/463 (66.95%), Query Frame = 0 
Query:    1 MSSESENSDSSLDSDGHL-YLGTMENFRIKRGRVRAKYAM--ADNTNSAMIRRMSKIHGCKEENW-DTSTLERFRVRATAKNWTKLFLSEDIVLQGQYECANLLRRSPCVSSNPVIIAADAFFPYCSDQDRKVNGYKVGEVQNARMVTIVHLSNSTSRQLTLDAGEVYLIGGLYDP---RPYCHVCRESHDLDTTPCAQALRFMPLPPHSHFNKQIFDREQAGPRMLTLITGEPSKLQCHPSDEELCKDCRQKAADDGGMWFRMDGSCEDKLCPNNEWCECWDENEPDSGLCAHYIYVKQWTYNNLAEDPLAIAVASGVIKVVTGCIQPYLQKWTSRSLRRVARKIFKHGTRLTLETLLEEHAKESGRLSKCEVMALAMSDTKLADLVDGYNSYTLNKVNGLVENTEMMHVGPWLTGRLTKDCDGVWWQTGRNEPVLVSTEDDVSIVRKASMASMRESDELGQ 456
            M++ S+NSDSSL+SD HL YLGT+E FRIKR  VRA  A           IRRMS I    EENW  +S L+RFR+R TAK+WT  F+S+DI+LQG YECANLLR S   SSNP++  AD +FPYCS  +R V+G+ V EV    + T VHLS+  S ++TL A  VYLIG + +    +P C++C   HDL+ +PC     F+PLP H+H   +I+DR + G R+LT I G+ S L C    E+LC  C  +A   G  WF+MDG+C D  CPN+E C+C +E++     C+HYIY+     NN+ +D LA+AVA G ++V+TG ++   ++  S ++R++A K  K G  +++++L+   +    +LSKCEVMA+AM DT+LADL+DG+ S+TLN VNG V N E   VGPWL GRL +D +G+WWQT R+EP+LVST D +S V KAS++S++ SDELG+
Sbjct:    1 MATGSQNSDSSLESDEHLLYLGTLEEFRIKRKHVRATRAKQPGGGVEQVKIRRMSDIDVSSEENWLRSSNLQRFRMRKTAKDWTAFFMSQDILLQGPYECANLLRNSS--SSNPLLFEADRYFPYCSTSERVVHGHVVAEVPMINL-TKVHLSSRRSHRITLKAQCVYLIGKVEEEAQSKP-CYLCWTKHDLNDSPCPSISIFVPLPSHAHLKTRIYDRVRCGARVLTKIAGQNSTLACSSGREDLCTSCLARAVRSGCTWFKMDGTCNDWYCPNDERCDCVEESDS----CSHYIYIPDAKRNNIVDDDLAVAVAEGKVRVLTGALESEWRRKMSYTVRKLAMKALKSGAEISVDSLVRTFSAIDSKLSKCEVMAMAMYDTRLADLIDGHKSFTLNDVNGFVRNAEATEVGPWLAGRLVRDAEGIWWQTARSEPLLVSTRDAISTVSKASVSSLQTSDELGR 455
The following BLAST results are available for this feature:
BLAST of Gcaud6895.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISX1_9FLOR2.880e-14648.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2392_length_5844_cov_4.185642contigNODE_2392_length_5844_cov_4.185642:2010..3389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6895.t1Gcaud6895.t1Gracilaria caudata M_176_S67 malemRNANODE_2392_length_5844_cov_4.185642 2010..3389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6895.t1 ID=Gcaud6895.t1|Name=Gcaud6895.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=460bp
MSSESENSDSSLDSDGHLYLGTMENFRIKRGRVRAKYAMADNTNSAMIRR
MSKIHGCKEENWDTSTLERFRVRATAKNWTKLFLSEDIVLQGQYECANLL
RRSPCVSSNPVIIAADAFFPYCSDQDRKVNGYKVGEVQNARMVTIVHLSN
STSRQLTLDAGEVYLIGGLYDPRPYCHVCRESHDLDTTPCAQALRFMPLP
PHSHFNKQIFDREQAGPRMLTLITGEPSKLQCHPSDEELCKDCRQKAADD
GGMWFRMDGSCEDKLCPNNEWCECWDENEPDSGLCAHYIYVKQWTYNNLA
EDPLAIAVASGVIKVVTGCIQPYLQKWTSRSLRRVARKIFKHGTRLTLET
LLEEHAKESGRLSKCEVMALAMSDTKLADLVDGYNSYTLNKVNGLVENTE
MMHVGPWLTGRLTKDCDGVWWQTGRNEPVLVSTEDDVSIVRKASMASMRE
SDELGQWMA*
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