Gcaud6869.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6869.t1
Unique NameGcaud6869.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length207
Homology
BLAST of Gcaud6869.t1 vs. uniprot
Match: A0A2V3IWL9_9FLOR (Protein SCO1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWL9_9FLOR)

HSP 1 Score: 323 bits (829), Expect = 3.730e-110
Identity = 156/205 (76.10%), Postives = 176/205 (85.85%), Query Frame = 0
Query:    1 MLAACALLGTGGLAYYSRERERQIKAVTRPRTVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMAARMHAQMLACK 205
            ++A C LLG+GGLA YSRERERQI AVTRPRTVGKAAIGG FE++DA GA FTE+RL+GKWS+IYFGF MCPDICPAEM+KVADAL  LE+RG+RVGH E   VAP+F+TVD +RDDA RADEYAK FH  FVGLAG+  Q RH AKQYRVYYSRDDG+ D+YLVDHSIITYLMDP+GEF EFYGKNSSA EMAAR+  +MLA K
Sbjct:   29 VVALCGLLGSGGLALYSRERERQIAAVTRPRTVGKAAIGGAFELQDARGARFTEQRLLGKWSLIYFGFCMCPDICPAEMTKVADALSTLERRGLRVGHEEGCRVAPIFITVDAERDDAERADEYAKAFHKGFVGLAGTEAQVRHTAKQYRVYYSRDDGEGDEYLVDHSIITYLMDPNGEFVEFYGKNSSAAEMAARVEGRMLAWK 233          
BLAST of Gcaud6869.t1 vs. uniprot
Match: R7QCB0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCB0_CHOCR)

HSP 1 Score: 241 bits (614), Expect = 3.520e-77
Identity = 124/210 (59.05%), Postives = 154/210 (73.33%), Query Frame = 0
Query:    2 LAACALLGTGGLAYYSRERERQIKA---VTRPRTVGKAAIGGPFEMRD-ATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKRGIRVGHAEH--SDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMAARMHAQMLACK 205
            LA   + GT GL YYS +++ +++    + RP+TVGKAAIGG F + D ++GA   E  L+G+W+++YFGFTMCPD+CPAE++KV +AL +LE RG RV       S V P+F++VDP RD   RA EYA  FH AFVGL+GS EQ R  AK YRVYYSRD G+ D+YLVDHSIITYLMDP GEF EFYG NSSA E+AAR+ AQMLA K
Sbjct:   44 LAVFGVAGTAGLGYYSVKKQARMEGKRDIMRPQTVGKAAIGGAFSLVDGSSGAAVDETFLLGRWTLVYFGFTMCPDVCPAELTKVGEALTMLEGRGRRVRRDGKGGSVVTPVFISVDPARDSPERAAEYAAGFHKAFVGLSGSDEQVRQAAKAYRVYYSRDGGEGDEYLVDHSIITYLMDPGGEFREFYGTNSSAAEIAARVEAQMLAWK 253          
BLAST of Gcaud6869.t1 vs. uniprot
Match: UPI001CF5F262 (protein SCO1 homolog, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5F262)

HSP 1 Score: 192 bits (488), Expect = 1.150e-57
Identity = 97/208 (46.63%), Postives = 139/208 (66.83%), Query Frame = 0
Query:    2 LAACALLGTGGLAYYSR--ERERQI-KAVTRPRTVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDD-DYLVDHSIITYLMDPSGEFAEFYGKNSSATEMAARMHAQMLACK 205
            LA  AL G GGL +Y R  + E+++ K   + R++GK A+GGPF + D  G   T+K  +GKW ++YFGFT CPDICP E+ K+A A+ I++K   ++G    +++ PLF+TVDP RDD      Y K FH   +GL G++EQ   + K YRVY+S    D+D DY+VDH+II YL+DPSGEFAE++G+N +A ++AA +   ML+ K
Sbjct:   81 LALVALAG-GGLVFYVRNLKEEKELEKEKAKKRSIGKVALGGPFSLTDQNGKAVTDKDFLGKWVLLYFGFTHCPDICPDELEKMAKAIDIVDKNKDKLG----AELQPLFITVDPSRDDVEAVRTYVKEFHPRLLGLTGTSEQINQVCKAYRVYFSAGPSDEDNDYIVDHTIIQYLVDPSGEFAEYFGQNKTAEDIAAGITRNMLSHK 283          
BLAST of Gcaud6869.t1 vs. uniprot
Match: UPI0009E6065B (protein SCO1 homolog, mitochondrial-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E6065B)

HSP 1 Score: 189 bits (480), Expect = 2.190e-56
Identity = 92/207 (44.44%), Postives = 136/207 (65.70%), Query Frame = 0
Query:    2 LAACALLGTGGLAY--YSRERERQIKAVTRPRTVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDD-DYLVDHSIITYLMDPSGEFAEFYGKNSSATEMAARMHAQMLACK 205
            LA  AL G G L Y  Y +E + +IK   + R++GK A+GGPF + D  G   T+K   GKW ++YFGFT CPDICP E+ K+  A+ I++K+   +G    +++ PLF+TVDP RDD     +Y + FH   +GL GS EQ + + + YRVY+S+   D+D DY+VDH+II YL+DP+GEFAE++G+N +A ++A  +   M++ K
Sbjct:   81 LALVALAGGGLLLYVRYLKEEKERIKQKEKNRSIGKVALGGPFSLTDHNGKAVTDKDFHGKWILLYFGFTHCPDICPDELEKMGQAIDIVDKQKESLG----AELQPLFITVDPMRDDVEAVKQYVQEFHPRLLGLTGSLEQVQQVCRAYRVYFSQGPADEDNDYIVDHTIIQYLVDPTGEFAEYFGQNKTAEDIATGITKHMISYK 283          
BLAST of Gcaud6869.t1 vs. uniprot
Match: A0A1Y1HZU1_KLENI (Thioredoxin domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZU1_KLENI)

HSP 1 Score: 187 bits (476), Expect = 3.380e-56
Identity = 92/203 (45.32%), Postives = 131/203 (64.53%), Query Frame = 0
Query:    2 LAACALLGTGGLAYYSRERERQIKAVTRPRTVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKR-GIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMAARMHAQMLA 203
            LA   + G G LA+Y RE+ R+++ V +  +VGKAAIGG FE+ +  G   T+K   G W+++YFGFT CPDICP E+ K+A+A+  +E   G++V         P+F++VDP+RD+  +   Y K FH   VGL GSAE  +  AK YRVYY + + + DDYLVDHSII YLMDP+ EF +F+GKN +   +A  +  ++ A
Sbjct:   64 LALLLITGAGLLAFYDREKRRKLETVKQGPSVGKAAIGGAFELVNQDGKKVTDKDFKGNWNLVYFGFTFCPDICPDELKKMAEAIDKVETNIGVKV--------VPIFISVDPERDNVEQVGRYVKEFHPRLVGLTGSAEAVKQAAKAYRVYYMKTEEEGDDYLVDHSIIQYLMDPNMEFVKFFGKNYTVDTLAESIAGEIKA 258          
BLAST of Gcaud6869.t1 vs. uniprot
Match: E1ZGV7_CHLVA (Thioredoxin domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGV7_CHLVA)

HSP 1 Score: 186 bits (473), Expect = 4.820e-56
Identity = 92/191 (48.17%), Postives = 129/191 (67.54%), Query Frame = 0
Query:    9 GTGGLAYYSRERERQIKAVTRPR----TVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEK-RGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMA 194
            G G L +Y+ E+E++++ +TR       VG+AAIGGPF++ D TG  FT+K L+G+++++YFGFT CPDICP E+ K+A A  + EK  G++V         P+F++VDPQRD   +  +Y K FH   +GL G  E+    AK YRVY+S+    +DDYLVDHSIITYL++P G+F  FYGKN +A EMA
Sbjct:   41 GAGLLWWYNHEKEKKLEEITREGKSSVVVGQAAIGGPFDLIDHTGKRFTDKDLLGRFALLYFGFTWCPDICPEELEKIAAATDLTEKLSGVQV--------VPVFLSVDPQRDGVEQVRDYVKEFHPRMIGLTGPYERVGEAAKAYRVYFSKTQDSEDDYLVDHSIITYLINPEGKFVSFYGKNFTAEEMA 223          
BLAST of Gcaud6869.t1 vs. uniprot
Match: A0A3Q7HXP5_SOLLC (Thioredoxin domain-containing protein n=4 Tax=Solanum TaxID=4107 RepID=A0A3Q7HXP5_SOLLC)

HSP 1 Score: 188 bits (478), Expect = 1.040e-55
Identity = 92/188 (48.94%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    9 GTGGLAYYSRERERQIKAVTRPRT-------VGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRIL-EKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNS 188
            G G + YY RE++R I+ +T   T       VGKAAIGGPF + D  G P TEK   GKW+V+YFGFT CPDICP E+ K+A A+ I+ E  GI        ++ P+F++VDP+RD   + DEY K FH   +GL GS E+ +  A+ YRVYY + + +  DYLVDHSI+ YLMDP  EF +F+GKN+
Sbjct:  125 GAGLVVYYDREKKRHIEDITNASTSVKQGPSVGKAAIGGPFSLIDHNGKPVTEKDFFGKWTVVYFGFTHCPDICPDELQKLATAVDIIKETSGI--------EIVPVFISVDPERDTVEQVDEYVKEFHPNLIGLTGSPEEIKKTARAYRVYYMKTEEEGSDYLVDHSIVMYLMDPKMEFVKFFGKNN 304          
BLAST of Gcaud6869.t1 vs. uniprot
Match: A0A2P6VDU3_9CHLO (SCO1-like protein mitochondrial n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDU3_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 1.140e-55
Identity = 94/188 (50.00%), Postives = 126/188 (67.02%), Query Frame = 0
Query:   11 GGLAYYSRERERQIKAVTRPR----TVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMA 194
            G L +Y+ E+E++++ ++R       VG+AAIGGPFE+ D  G  FTEK L+G+++++YFGFT CPD+CP E+ K+A A    EK       A    V P+F++VDPQRD   +  +Y K FH   +GL G+ EQT   AK YRVYYS+    DDDYLVDHSIITYL++P G+F  FYGKN +A EMA
Sbjct:   69 GLLWWYNHEKEKKLEDISREGKSSVVVGQAAIGGPFELVDHRGKRFTEKDLLGQFALMYFGFTWCPDVCPEELEKIAAATDKTEK-------ATGVQVVPVFLSVDPQRDGVEQVRDYVKEFHPRMIGLTGTYEQTGAAAKTYRVYYSKTQDSDDDYLVDHSIITYLINPDGKFVTFYGKNFTADEMA 249          
BLAST of Gcaud6869.t1 vs. uniprot
Match: A0A484KX84_9ASTE (Thioredoxin domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KX84_9ASTE)

HSP 1 Score: 186 bits (471), Expect = 1.710e-55
Identity = 94/198 (47.47%), Postives = 129/198 (65.15%), Query Frame = 0
Query:    7 LLGTG-GLAYY-SRERERQIKAVTRPR-------TVGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADAL-RILEKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMA 194
            LLGTG GL YY  RE++R I+ ++          +VGKAAIGGPF + D  G P TEK  +G+WS++YFGFT CPDICP E+ K+A A+ +I EK G++V         P+F++VDP+RD   +  EY K FH   +GL G+ E+ + +A+ YRVYY +   +  DYLVDHSI+ YLMDP  EF +F+GKN+    +A
Sbjct:   53 LLGTGAGLVYYYDREKKRHIEGISSASNAMKQGPSVGKAAIGGPFSLIDHNGKPVTEKDFLGRWSMLYFGFTHCPDICPEELQKLAAAIDKIKEKSGLKV--------VPVFISVDPERDTVEQVCEYVKEFHPTLIGLTGNLEEIKKVARAYRVYYMKTQEEGSDYLVDHSIVMYLMDPEMEFVKFFGKNNDVDTLA 242          
BLAST of Gcaud6869.t1 vs. uniprot
Match: A0A5A7Q0N9_STRAF (Protein SCO1 homolog 1 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7Q0N9_STRAF)

HSP 1 Score: 188 bits (477), Expect = 1.820e-55
Identity = 93/194 (47.94%), Postives = 125/194 (64.43%), Query Frame = 0
Query:    9 GTGGLAYYSRERERQIKAVTRPRT-------VGKAAIGGPFEMRDATGAPFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADAL-RILEKRGIRVGHAEHSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYRVYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMA 194
            G G + YY RE++R I+ +T   T       VGKA+IGGPF + D  G P T+K   GKW++IYFGFT CPDICP E+ K+A+A+ RI EK  +        +V P+F++VDP+RD   +  EY K FH   +GL GS E  +  A+ YRVYY + + +  DYLVDHSI+ YLMDP+ EF +F+GKN  AT +A
Sbjct:  133 GAGLVYYYDREKKRHIEGITNASTAVKEGPSVGKASIGGPFSLIDHNGKPVTDKDFKGKWNLIYFGFTHCPDICPDELQKMAEAIDRIKEKSKV--------EVVPVFISVDPERDTVEQVREYVKEFHPKLIGLTGSPEDVKKAARAYRVYYMKTEEEGSDYLVDHSIVMYLMDPNMEFVKFFGKNYDATSLA 318          
The following BLAST results are available for this feature:
BLAST of Gcaud6869.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWL9_9FLOR3.730e-11076.10Protein SCO1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QCB0_CHOCR3.520e-7759.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001CF5F2621.150e-5746.63protein SCO1 homolog, mitochondrial-like n=1 Tax=A... [more]
UPI0009E6065B2.190e-5644.44protein SCO1 homolog, mitochondrial-like n=1 Tax=O... [more]
A0A1Y1HZU1_KLENI3.380e-5645.32Thioredoxin domain-containing protein n=1 Tax=Kleb... [more]
E1ZGV7_CHLVA4.820e-5648.17Thioredoxin domain-containing protein n=1 Tax=Chlo... [more]
A0A3Q7HXP5_SOLLC1.040e-5548.94Thioredoxin domain-containing protein n=4 Tax=Sola... [more]
A0A2P6VDU3_9CHLO1.140e-5550.00SCO1-like protein mitochondrial n=1 Tax=Micractini... [more]
A0A484KX84_9ASTE1.710e-5547.47Thioredoxin domain-containing protein n=1 Tax=Cusc... [more]
A0A5A7Q0N9_STRAF1.820e-5547.94Protein SCO1 homolog 1 n=1 Tax=Striga asiatica Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003782Copper chaperone SCO1/SenCPFAMPF02630SCO1-SenCcoord: 39..180
e-value: 5.5E-43
score: 146.2
IPR003782Copper chaperone SCO1/SenCPANTHERPTHR12151ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBERcoord: 3..202
IPR003782Copper chaperone SCO1/SenCCDDcd02968SCOcoord: 38..185
e-value: 4.69708E-60
score: 182.803
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 19..204
e-value: 3.2E-55
score: 188.4
NoneNo IPR availablePIRSRPIRSR037736-1PIRSR037736-1coord: 34..194
e-value: 7.7E-51
score: 170.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 37..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_37_length_70757_cov_4.492641contigNODE_37_length_70757_cov_4.492641:24415..25141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6869.t1Gcaud6869.t1Gracilaria caudata M_176_S67 malemRNANODE_37_length_70757_cov_4.492641 24415..25141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6869.t1 ID=Gcaud6869.t1|Name=Gcaud6869.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=207bp
MLAACALLGTGGLAYYSRERERQIKAVTRPRTVGKAAIGGPFEMRDATGA
PFTEKRLIGKWSVIYFGFTMCPDICPAEMSKVADALRILEKRGIRVGHAE
HSDVAPLFVTVDPQRDDATRADEYAKMFHSAFVGLAGSAEQTRHMAKQYR
VYYSRDDGDDDDYLVDHSIITYLMDPSGEFAEFYGKNSSATEMAARMHAQ
MLACKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003782SCO1/SenC
IPR036249Thioredoxin-like_sf