Gcaud6867.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6867.t1
Unique NameGcaud6867.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length304
Homology
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A2V3IWL2_9FLOR (Armadillo repeat-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWL2_9FLOR)

HSP 1 Score: 407 bits (1045), Expect = 2.040e-140
Identity = 227/303 (74.92%), Postives = 252/303 (83.17%), Query Frame = 0
Query:    1 MSVADAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVEAQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPHADRELRQTIFDVLEELVDDNXXXXXXXXXXXEQRAGLRDKPAPEPGLLEQPCTVRLHVPGISDDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISYVSTMTGVNVQQLPDAXXXXXXXXXXXMHDTASEKENEAAQPAYLDQSGQRLRDVARKNAKKKNTISQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 303
            M+VADAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFV AQ IPVATIAVAA++NL          RSEH+LLDALK LLLA  ADR+LRQT+FDVLE+LVD++     XXXXX EQ+AGLR+K   EPGL++ P TVRLH+ GISD++ CVRVEQLV+R  GVIS+AFE+GAEVAVIYTRT A+ LISY+STMTGV VQQL D              DT SEKEN+  QPAYLDQSGQRLRDVA+KNAKKK+TI+QGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW
Sbjct:    1 MAVADAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVHAQHIPVATIAVAAIRNLXXXXXXXXXXRSEHDLLDALKNLLLANDADRDLRQTVFDVLEQLVDESDDDEMXXXXXLEQQAGLREKTTSEPGLMDHPSTVRLHIHGISDELLCVRVEQLVIRTRGVISVAFELGAEVAVIYTRTTAEHLISYLSTMTGVKVQQLEDPPEEEHE------EDTESEKENDTTQPAYLDQSGQRLRDVAKKNAKKKHTITQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 297          
BLAST of Gcaud6867.t1 vs. uniprot
Match: M2XW49_GALSU (Armadillo repeat-containing protein 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XW49_GALSU)

HSP 1 Score: 146 bits (369), Expect = 4.400e-38
Identity = 110/332 (33.13%), Postives = 164/332 (49.40%), Query Frame = 0
Query:    8 SVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVEAQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLA-PHADRELRQTIFDVLEELV----DDNXXXXXXXXXXXEQRAGLRDKPAPEPGL-------------------------LEQPCTVRLHVPGISDDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISYVSTMTGVNVQQLPDAXXXXXXXXXXXMHDTASEKENEAAQ-----PAYLDQSGQRLR-DVARKNAKKKNTISQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 303
            S+R VAVQLR+LSAD +NQPIIARE+GC+ AL+ F+E  D  +  IAV A+ +L SHPDN ++++SE  L+ ALK L+     AD   RQ+    L  L+     ++             + GL  K A +  L                         L Q  T+RL+V  +SD+    RVE+L+V   GV+S++FE+G E  ++ +R  A+ +   +    G   + + +                   + NEA       P YLD+   R R   + +   K      G  +L ERL AQR+EE++K+ARA RL++ IG+   SG+G W
Sbjct:    7 SIRNVAVQLRSLSADTENQPIIAREEGCMAALVGFIEGNDSEIVRIAVEAILDLTSHPDNAEVMKSERGLVSALKALVTDFDRADIGTRQSAHACLVNLLVRNSKESQAFIAEELASLANKGGLGGKEAFDSSLSTVLKPKAQNCLSEQNHADLVDVPFLPQTLTIRLYVRNVSDEDVQYRVERLLVMTRGVVSVSFEIGTETVIVRSRIAAEYVRKAIELRGGFPAEIIDEEVYIEKENNQL--------RSNEALYISSDGPKYLDEMPSRSRLSWSWQRGDKIIVPGNGGVTLAERLEAQRKEEAKKRARATRLVNRIGKSFVSGFGFW 330          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A1X6P5N0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5N0_PORUM)

HSP 1 Score: 147 bits (371), Expect = 2.860e-36
Identity = 112/308 (36.36%), Postives = 151/308 (49.03%), Query Frame = 0
Query:    9 VRTVAVQLRALSADPDNQPIIAREDGCLRALISFVEAQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPHADRELRQTIFDVLEELVDDNXXXXXXXXXXXEQRAGLRDKPAPEPGLLEQPCTVRLHVPGISDDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISYVSTMTGVNVQQLPDAXXXXXXXXXXXMHDTASEKENEA--------------------AQPAYLDQSGQRLRDVARKNAKKKNTISQGASSLHERLRAQREEESRKKARANRLLDSIGRGM 296
            V  VA Q++AL+A  +NQPI+AREDGCL ALISF+      +AT+AVAAL +L++HP N  LLR E +L  AL  L++       LR++   +LEELVDD               AGL                    V G        RVE L++R  GV S+ FE+GAE AV++ R+ A     ++  M G  V  LP   XX                                        A   YLD++GQRL+D  R+  KKK  ++ GASSL  RL  QR+ E+RK+A+  RLL+ +GRG+
Sbjct:  252 VMAVAEQIQALAAVRENQPIVAREDGCLPALISFLVPSTPSLATVAVAALVSLSAHPSNRSLLRDEGDLFAALHALIVDDATPVPLRRSTLTILEELVDDEDGEEVTELHALSVAAGL--------------------VAGAVR----ARVEGLLLRLPGVFSVGFELGAETAVVFGRSGADATAGWLRKMAGGGVTLLPPEEXXEVEAGRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGYLDETGQRLKDAERRARKKKKAVNAGASSLAARLDEQRKAEARKRAKQERLLERVGRGV 535          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A5J4YQP9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQP9_PORPP)

HSP 1 Score: 120 bits (300), Expect = 1.480e-27
Identity = 97/308 (31.49%), Postives = 141/308 (45.78%), Query Frame = 0
Query:   12 VAVQLRALSADPDNQPIIAREDGCLRALISFVE-AQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPH-ADRELRQTIFDVLEELVDDNXXXXXXXXXXXEQRAGLRDK---------------PAPEP-GLLEQPCTVRLHVPGISDDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISYVSTMTGVNVQQLPDAXXXXXXXXXXXMHD----------TASEKENEAAQPAYLDQSGQRLRDVARKNAKKKNTISQGASSLHERLRAQREEESRKKARANRLLDS 291
            +A QL  LS+D D QP++AREDGC+ AL+ F   A D      A+ AL NLASHPDNF LLR E  L  ALK ++L    ADR +R   F ++E L D+            ++R   R +               PAPE       P T+R+H  G+S++    R E  + +  GV S+  E+G EV  + +   A  L++++  + G  + +L  +            +           +A  + N   +PAYLD       D+       K+    G +SL  RL  Q+  E RKK RANR   +
Sbjct:   93 IASQLLELSSDFDMQPVVAREDGCVSALVKFAGGATDAETCRTALRALDNLASHPDNFALLRGEQGLWSALKVVMLTREDADRAMRTAAFGIMETLTDEINYDEVQELRRIQKRLAQRQQEENDTEDGALANLVYPAPESVPQAAVPGTLRVHCVGLSEEATRRRAEVALTKFPGVHSVTIEVGPEVLEVQSTCEASALLAFLPQVNGQRLVELIQSQADSEETNKENANGESGGADMQGKSAHGEANTGGKPAYLD-------DLNSAQIPHKSVTHAGGNSLAARLEEQKRAEMRKKNRANRFFSN 393          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A7S0ZAL9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAL9_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 5.710e-16
Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 0
Query:    5 DAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVE-AQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPHADRELRQTIF 99
            D   VR +A QLR LS D + QP++ARE+GC+RAL+  V  A DI    IA+ AL  LASHPDN   LR E +L DAL+ +++   AD+ LR   F
Sbjct:   25 DEDQVRGLAEQLRELSRDVEMQPVVAREEGCMRALVRLVGGASDIKSCAIALEALSMLASHPDNKYTLRMEPQLFDALRKVMVRSDADKSLRNEAF 120          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A7S0ZAL4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAL4_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 2.530e-15
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 0
Query:  127 RDKP-APEPGLLEQPCTVRLHVPGIS--DDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISYVSTMTGVNVQQLPDAXXXXXXXXXXXMHDTASEKENEAAQ--PAYLDQSGQRLRDVARKNAKKKNTISQGA-SSLHERLRAQREEESRKKARANRLLDSI 292
            RD+P A E  LL + CT+RLH  G+S  +D+  + VE  ++R  GV+S+ FE+GAE+  + +R P++D++  V  +T  +V  L ++            H+   + ENE  +  P Y+D+  +R R    K+ K K T++QG  +SL  RL  Q+  E+RK+ RANR L  +
Sbjct:   62 RDEPGADEIKLLPEACTIRLHCVGLSRTEDIRML-VEHRLLRSVGVLSVTFELGAEIVELQSRRPSEDVVKIVQKITKQSVVVLENSIDDGDEE-----HELVKD-ENEVDEDGPQYIDKQRERERRREEKSGKPKRTVTQGGGNSLAARLEEQKRAEARKQQRANRFLGGV 226          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A2R5GV71_9STRA (Armadillo repeat-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV71_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 6.430e-9
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    5 DAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVEAQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPHADREL 94
            D  + R +A QL  L+ DPDNQP I +E GCL  L+ +V+ +DI V  IA  AL+ L+SHP N   +R    L++ +K      H +  L
Sbjct:    7 DVPNSRAIAKQLLTLAQDPDNQPFIVQEQGCLAGLVQYVQHEDIDVVLIATRALQFLSSHPKNKTAMREFPALVENVKLAKTRSHENPRL 96          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A0H5RKG1_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RKG1_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 4.920e-6
Identity = 77/292 (26.37%), Postives = 126/292 (43.15%), Query Frame = 0
Query:   12 VAVQLRALSADPDNQPIIAREDGCLRALISFVEA-QDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPHADRELRQTIFDVLEELVDDNXXXXXXXXXXXEQRAGLRDKPAPEPGLLEQPCTVRLHVPGISDDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISY--VSTMTGVNVQQLPDAXXXXXXXXXXXMHDTASEKENEAAQPAYLDQSGQRLRDVARKNAKKKNTISQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGW 300
            +A++LR L+ +PDNQ  IARE GC+  LI+F+ A  D+ V  +A   +  L+SHP N  LL S  +L+  L  L    H+++ L       L  L   +           E R     K + E        +V+L +   SDD   V+    +++  GV+S++      +A +Y+    +  +SY  V ++  +N++                   + +E    ++ P YL+    +    AR +A      S   SSL  RL  QR+ E +K    NR      +  TS W
Sbjct:   21 IALKLRQLATEPDNQLYIAREQGCIGGLINFLSAGNDLSVMLLAAQTVLFLSSHPSNRTLLLSMKQLVSNLTEL--CTHSNQNLAHFCSASLVNLAKSD-----------ETRVQSFKKKSLE--------SVKLQLNCASDDEEAVK--SAILQVAGVVSVSINRR-HIATVYS---VKKSLSYHLVESLRRINIESEEILEKF-----------SNAEASGGSSAPQYLEHQSFK----ARPDALSIYADSFEESSLANRLARQRQLERKKIESQNRAKSIFSKVWTSIW 270          
BLAST of Gcaud6867.t1 vs. uniprot
Match: A0A0G4ISF0_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISF0_PLABS)

HSP 1 Score: 57.0 bits (136), Expect = 9.200e-6
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   12 VAVQLRALSADPDNQPIIAREDGCLRALISFVE-AQDIPVATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPH 89
            +A++LR L+A+PDNQ  IARE GC+  LI F+    D+ +  IA  A+  L+SHP N +LL     L+  L  L   P+
Sbjct:   24 IALKLRQLAAEPDNQMYIAREPGCIGGLIGFLAPGNDLRIMLIAAQAILFLSSHPSNRKLLLGMSALISHLTELCTHPN 102          
The following BLAST results are available for this feature:
BLAST of Gcaud6867.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IWL2_9FLOR2.040e-14074.92Armadillo repeat-containing protein 1 n=1 Tax=Grac... [more]
M2XW49_GALSU4.400e-3833.13Armadillo repeat-containing protein 1 n=1 Tax=Gald... [more]
A0A1X6P5N0_PORUM2.860e-3636.36Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YQP9_PORPP1.480e-2731.49Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZAL9_9RHOD5.710e-1648.96Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S0ZAL4_9RHOD2.530e-1535.47Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2R5GV71_9STRA6.430e-940.00Armadillo repeat-containing protein 1 n=1 Tax=Hond... [more]
A0A0H5RKG1_9EUKA4.920e-626.37Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A0G4ISF0_PLABS9.200e-641.77Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 268..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..287
NoneNo IPR availablePANTHERPTHR46840ARMADILLO REPEAT-CONTAINING PROTEIN 1coord: 8..261
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..170
e-value: 2.2E-10
score: 41.6
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 34..67
score: 8.837399
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 14..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_37_length_70757_cov_4.492641contigNODE_37_length_70757_cov_4.492641:18841..19752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6867.t1Gcaud6867.t1Gracilaria caudata M_176_S67 malemRNANODE_37_length_70757_cov_4.492641 18841..19752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6867.t1 ID=Gcaud6867.t1|Name=Gcaud6867.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=304bp
MSVADAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVEAQDIPV
ATIAVAALKNLASHPDNFQLLRSEHELLDALKTLLLAPHADRELRQTIFD
VLEELVDDNDDEEMDELDELEQRAGLRDKPAPEPGLLEQPCTVRLHVPGI
SDDVFCVRVEQLVVRKHGVISIAFEMGAEVAVIYTRTPAQDLISYVSTMT
GVNVQQLPDAPDDEDDEDDDDMHDTASEKENEAAQPAYLDQSGQRLRDVA
RKNAKKKNTISQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGW
GLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR000225Armadillo
IPR016024ARM-type_fold