Gcaud6856.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6856.t1
Unique NameGcaud6856.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length679
Homology
BLAST of Gcaud6856.t1 vs. uniprot
Match: A0A2V3IXY8_9FLOR (Protein REVEILLE 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXY8_9FLOR)

HSP 1 Score: 566 bits (1458), Expect = 1.660e-190
Identity = 390/710 (54.93%), Postives = 458/710 (64.51%), Query Frame = 0
Query:    1 MPQTAPLWVDPASALAVAAPQPIHYFPVAHPAPQLPPKQPPASQDLPLPRPRKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKVREQPPVSAHLPTVPNANPNTHTATSIPPA---------AAAHPHPA-HPQAFAIPVQQLHPA------IASAXXXXXXXXXXXXAASPSTYIPQMQAPRYVAQPQPHIAIQQHPSTPTMFSPYLNICPTQSPGAQRPNFESSVHPSPVSFVSGHTYTAQSPAPQPQHMSVAHPVFNVFSPLTPGTYASA-VARSPSVAQAPNSIVPIAQVQRPVAQHVPIHSHAEGPLANCAKCNALRRHGGVLQEIVQIG-SHPLSTPQVVHSN-QPVRWQPAHQNQQKGSKLEPGSNTTKLVNQATDSTACATVQEQSASTSGKKSVDDSLPSFNDSRKTTTVS-PTPAKSRTQRSKFSKSKKMIRNRNVIEREDNNVSSGEMSESDNFSRIKPLSMDISEPDRREDSSRERNKQTACSVVR-TKKRKSSHS---LPSGITGKNHRDGLQRRPKKIKCVPIAPSPTVANNSAKRPRTKLPPKPEQPVFAPGNRASEES-----EEDKTQDKQHXXXXXXXXXXXXXXXXXXSESDVGSPRVETYSPKEQKEIFDAVHSLQILSRTPSSSSPSQSDSK---DDR 678
            MP  AP+WVDP +A+AVA PQ IHY PV          Q            RKPYTTTKVREMWSASEHQRM++GLRLFKR WAKVTEHVGTRS AQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRK+RE P      P  P+ + N  +AT  P           A AH HPA HPQ +A P+ Q+H A      I S             AASP+ ++P +Q   Y+AQP   I IQ  PS   +FSPYLN+CPTQSP   RPNF +S HPSP+S+VSG TY AQSP PQPQH+ + HPVFN+ SP+TPG Y SA +A+SPSVAQ P ++VP+  +Q    Q   +HSH  GP+ NCAKCNALRR+GGVLQEIVQIG S PL +  VV +  +P  W    Q QQ  +K    S   K  NQATDSTACAT Q+ S STSGKK++D S+PS +DSRK T  S   PAKSR  RS+ SKS+K I  R V+E+  NNVSSGEMSESDNFSRIK  + D S+P   E S +ER  QT+  V + ++KR++S S   L S            R  KK +CVPIAPSP +   + KRPR      PE       +  + +      + +       XXXXXXXXXXXXXXXXXX      SPRV+ YSP+EQKEIFDAVHSLQILSRTPSSSSPS S+SK   DDR
Sbjct:   50 MPHIAPVWVDP-TAIAVAPPQHIHYLPVXXXXXXXXQSQFXXXXXXXXXX-RKPYTTTKVREMWSASEHQRMIDGLRLFKRHWAKVTEHVGTRSIAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKLREHP-----APPPPHTS-NPASATHAPXXXXXXXXXXXAPAHSHPAAHPQPYAFPLHQVHSALPPSHSIHSTPPLHAQQMHLQYAASPNPFVPHLQHSPYLAQPHHQITIQHQPSAQPVFSPYLNVCPTQSPNLHRPNFPASAHPSPMSYVSGQTY-AQSPTPQPQHVPMPHPVFNLISPITPGPYPSAAIAQSPSVAQTPATLVPVTPLQHHTPQLSHLHSHPGGPIDNCAKCNALRRYGGVLQEIVQIGGSQPLQSAHVVQTTTRPPPWNSLQQPQQLTTKGGAASTAAKPFNQATDSTACATNQDPSVSTSGKKTIDQSVPSSDDSRKNTGTSLRAPAKSRAHRSRLSKSRKRILKRTVVEQAQNNVSSGEMSESDNFSRIKSAATDSSKPTLNE-SPQERKTQTSPLVTKKSRKRRASFSSANLASTAMASADSSACPRPMKKARCVPIAPSPNLVKQAPKRPR------PESETHRNVSVVNTKDVHPIPDRENXXXXXXXXXXXXXXXXXXXXXXXXXXXXANSPRVDAYSPREQKEIFDAVHSLQILSRTPSSSSPSHSESKGNSDDR 743          
BLAST of Gcaud6856.t1 vs. uniprot
Match: R7Q6J8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6J8_CHOCR)

HSP 1 Score: 191 bits (486), Expect = 3.140e-49
Identity = 145/318 (45.60%), Postives = 181/318 (56.92%), Query Frame = 0
Query:   63 MWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKVREQP--PVSAHLPTVPNANPNTHTATSIPPAAAAHPHPAHP--QAFAIPVQQL----HPAIASAXXXXXXXXXXXXAASPSTYIPQMQAPR-YVAQPQPHIAIQQHPSTPTMFSPYLNICPTQSPGAQRPNFESSVHPSPVSFVSGHTYTAQSPA-PQPQHMSVAHPVFNVFSPLTPGTYASAVARSPSVAQAPNSIVPIAQVQ-RPVAQ-HVPIHSHAEGPLANCAKCNALRRHGGVLQEIVQI 368
            MW+++EH RMLEGLRLFKRDWAKVT  VGTRS AQVRSHAQKYFD+VAR+KTDDYVPRARPKRKSATPYPRK R+ P  P SAH      ++P     T +P       HPA+P     ++PVQ +    HP     XXXXXXXX     A+ S  I Q+      ++QP P     Q      ++SPY+   P+ S G    +                         P  Q  +    VFN+FSPLTP ++AS V +  ++     ++V    VQ RPV+Q H P HSH  GP+ NC KC AL+R+G VLQEI +I
Sbjct:    1 MWTSAEHDRMLEGLRLFKRDWAKVTSFVGTRSAAQVRSHAQKYFDRVARDKTDDYVPRARPKRKSATPYPRKARDHPSAPRSAHHQPTHLSHP-----TQLP-------HPANPTHHPMSVPVQSIAMPPHPQTIXXXXXXXXXXVPLHLANQSPLIQQLPVNSPCLSQPSPSNIPLQQAIPQHVYSPYV-FYPSPSSGQDPAHMRXXXXXXXXXXXXXXXXXXXXXXXPHIQATATNQQVFNMFSPLTPASFASTVTQLSAMNHLQMALVAAPHVQPRPVSQQHFPTHSHPGGPMENCTKCAALQRYGNVLQEIGEI 305          
BLAST of Gcaud6856.t1 vs. uniprot
Match: A0A7S1XGA9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGA9_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 4.230e-22
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:   40 PPASQDLPLPRPRKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKVREQP 139
            PP S      RPRKPYT TK RE WS  EH R +E ++ + RDW K+  H+GT+S  Q+RSHAQKYF KV + KT +YVP ARPK++++TPYP   + +P
Sbjct:   42 PPTSPQTSNKRPRKPYTITKARENWSDEEHARFVEAIQKYDRDWKKIEGHIGTKSVLQIRSHAQKYFAKVEKYKTGEYVPPARPKKRASTPYPTSSKTEP 141          
BLAST of Gcaud6856.t1 vs. uniprot
Match: A0A2I0ISF0_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0ISF0_PUNGR)

HSP 1 Score: 102 bits (254), Expect = 4.570e-22
Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   29 AHPAPQLPPKQPPASQDLPLPRPRKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRK 134
            A PAP   P   P S+D P  + RKPYT TK RE W+  EH + LE L+LF RDW K+   VG+++  Q+RSHAQKYF KV +  T ++VP  RPKRK+A PYP+K
Sbjct:   20 AAPAPT--PSSAPFSED-PSKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQK 122          
BLAST of Gcaud6856.t1 vs. uniprot
Match: M1V897_CYAM1 (MYB-related protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V897_CYAM1)

HSP 1 Score: 110 bits (274), Expect = 9.590e-22
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 0
Query:   50 RPRKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPR 133
            RPRKPY  +K RE W+  EHQR +E L LF+RDW K+ +HVGT++  Q+RSHAQKYF ++ +  T +Y+P  RPKR+SA+PYPR
Sbjct:  129 RPRKPYVKSKAREKWTEEEHQRFVEALHLFERDWKKIQKHVGTKTVLQIRSHAQKYFLRIQKHTTGEYIPPPRPKRRSASPYPR 212          
BLAST of Gcaud6856.t1 vs. uniprot
Match: D8QQE0_SELML (Uncharacterized protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QQE0_SELML)

HSP 1 Score: 100 bits (248), Expect = 1.070e-21
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   52 RKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRK 134
            RKPYT TK RE W+  EH + LE L LF RDW K+   VG+++  Q+RSHAQKYF KV R  T ++VP  RPKRK+A PYP+K
Sbjct:    7 RKPYTITKSRENWADEEHDKFLEALHLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQRNGTGEHVPPPRPKRKAALPYPQK 89          
BLAST of Gcaud6856.t1 vs. uniprot
Match: S8C9Q3_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C9Q3_9LAMI)

HSP 1 Score: 100 bits (249), Expect = 1.210e-21
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 0
Query:   52 RKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRK 134
            RKPYT TK RE W+  EH + +E L+LF+RDW K+ ++VG+++  Q+RSHAQKYF KV +  T  +VP  RPKRK+A PYP+K
Sbjct:   11 RKPYTITKSRESWTEEEHDKFIEALQLFERDWKKIEDYVGSKTVIQIRSHAQKYFLKVQKNGTTAHVPPPRPKRKAAHPYPQK 93          
BLAST of Gcaud6856.t1 vs. uniprot
Match: A0A388KCI6_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KCI6_CHABU)

HSP 1 Score: 103 bits (256), Expect = 1.350e-21
Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 0
Query:   52 RKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRK 134
            RKPYT TK RE W+  EH++ L+ L L+ RDW K+ ++VGT++  Q+RSHAQKYF KV +  T ++VP  RPKRKSA PYP+K
Sbjct:   32 RKPYTITKSRESWTEQEHEKFLQALHLYDRDWKKIEQYVGTKTVIQIRSHAQKYFLKVQKNGTGEHVPPPRPKRKSAQPYPQK 114          
BLAST of Gcaud6856.t1 vs. uniprot
Match: A0A443PFC2_9MAGN (Transcription factor 1R-MYB1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PFC2_9MAGN)

HSP 1 Score: 105 bits (262), Expect = 1.560e-21
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 0
Query:   41 PASQDLPLPRPRKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKVREQPPV 141
            P+S++ P  + RKPYT TK RE W+  EH R LE L+LF RDW K+   VG+++  Q+RSHAQKYF KV +  T ++VP  RPKRK+A PYP+K  +  P+
Sbjct:   16 PSSEEDPNKKIRKPYTITKSRESWTEQEHDRFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNDPL 116          
BLAST of Gcaud6856.t1 vs. uniprot
Match: Q0PJB8_SOYBN (MYB transcription factor MYB146 (Fragment) n=1 Tax=Glycine max TaxID=3847 RepID=Q0PJB8_SOYBN)

HSP 1 Score: 103 bits (257), Expect = 1.600e-21
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 0
Query:   52 RKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRSHAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKVREQPPVS 142
            RKPYT TK RE W+  EH + LE L+LF RDW K+   VG+++  Q+RSHAQKYF KV +  T ++VP  RPKRK+A PYP+K  + P VS
Sbjct:   50 RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKTPTVS 140          
The following BLAST results are available for this feature:
BLAST of Gcaud6856.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXY8_9FLOR1.660e-19054.93Protein REVEILLE 8 n=1 Tax=Gracilariopsis chorda T... [more]
R7Q6J8_CHOCR3.140e-4945.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XGA9_9RHOD4.230e-2253.00Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2I0ISF0_PUNGR4.570e-2252.83Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
M1V897_CYAM19.590e-2257.14MYB-related protein n=2 Tax=cellular organisms Tax... [more]
D8QQE0_SELML1.070e-2157.83Uncharacterized protein (Fragment) n=1 Tax=Selagin... [more]
S8C9Q3_9LAMI1.210e-2155.42Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A388KCI6_CHABU1.350e-2156.63Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A443PFC2_9MAGN1.560e-2151.49Transcription factor 1R-MYB1 n=1 Tax=Cinnamomum mi... [more]
Q0PJB8_SOYBN1.600e-2154.95MYB transcription factor MYB146 (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 60..108
e-value: 4.4E-6
score: 36.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 56..106
score: 6.44629
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 64..106
e-value: 3.06566E-6
score: 42.5626
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 62..105
e-value: 1.8E-10
score: 40.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 56..110
score: 15.659486
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 59..108
e-value: 3.1E-9
score: 35.0
NoneNo IPR availableGENE3D1.10.10.60coord: 64..110
e-value: 7.2E-13
score: 50.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..616
NoneNo IPR availablePANTHERPTHR12802:SF116OS02G0680700 PROTEINcoord: 52..138
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 52..138
IPR017884SANT domainPROSITEPS51293SANTcoord: 59..110
score: 11.416268
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 56..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_37_length_70757_cov_4.492641contigNODE_37_length_70757_cov_4.492641:54..2090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6856.t1Gcaud6856.t1Gracilaria caudata M_176_S67 malemRNANODE_37_length_70757_cov_4.492641 54..2090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6856.t1 ID=Gcaud6856.t1|Name=Gcaud6856.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=679bp
MPQTAPLWVDPASALAVAAPQPIHYFPVAHPAPQLPPKQPPASQDLPLPR
PRKPYTTTKVREMWSASEHQRMLEGLRLFKRDWAKVTEHVGTRSTAQVRS
HAQKYFDKVAREKTDDYVPRARPKRKSATPYPRKVREQPPVSAHLPTVPN
ANPNTHTATSIPPAAAAHPHPAHPQAFAIPVQQLHPAIASAHAVHPAPLH
VQYAASPSTYIPQMQAPRYVAQPQPHIAIQQHPSTPTMFSPYLNICPTQS
PGAQRPNFESSVHPSPVSFVSGHTYTAQSPAPQPQHMSVAHPVFNVFSPL
TPGTYASAVARSPSVAQAPNSIVPIAQVQRPVAQHVPIHSHAEGPLANCA
KCNALRRHGGVLQEIVQIGSHPLSTPQVVHSNQPVRWQPAHQNQQKGSKL
EPGSNTTKLVNQATDSTACATVQEQSASTSGKKSVDDSLPSFNDSRKTTT
VSPTPAKSRTQRSKFSKSKKMIRNRNVIEREDNNVSSGEMSESDNFSRIK
PLSMDISEPDRREDSSRERNKQTACSVVRTKKRKSSHSLPSGITGKNHRD
GLQRRPKKIKCVPIAPSPTVANNSAKRPRTKLPPKPEQPVFAPGNRASEE
SEEDKTQDKQHNDRAASDKSPSPSSPKPQSESDVGSPRVETYSPKEQKEI
FDAVHSLQILSRTPSSSSPSQSDSKDDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR017884SANT_dom
IPR009057Homeobox-like_sf