Gcaud6849.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6849.t2
Unique NameGcaud6849.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length319
Homology
BLAST of Gcaud6849.t2 vs. uniprot
Match: A0A2V3II70_9FLOR (Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II70_9FLOR)

HSP 1 Score: 434 bits (1117), Expect = 1.020e-150
Identity = 217/323 (67.18%), Postives = 262/323 (81.11%), Query Frame = 0
Query:    1 MNEDNGGTMWEPGTSCILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVD--CEDSKSQT----VTKAKSVKTKDIKSFFPPKPKPSDAGPSKRRKLARVSCPMPQVLKSMALRRTPTL 317
            M+E    +MW P T C+LGIDEAGRGPVLGPMVYAAAVCP S  + LRALGVNDSK  +E+ RD+LRS+I+ A+FLR FE  LTA +LS +MLR+EKYNLNL+SHD A+GLVQ A+D GINV+EIYVDTVGN EQYAAKFRERF  V+KVVVAKKAD+TYPIVGAASI+AKTTRDR I+EWCFPE++RS +F PGDAN  V+F+GP GSGYPSDP+TKTW+E NCD +FGFPTFVRFSWGT K I++++AV+V+  C+D ++      V K KSVKTKDIKSFFP K   S  G +K+RK  + +CP+PQ L+S+ LRR  TL
Sbjct:    1 MSEATDDSMWYPNTPCVLGIDEAGRGPVLGPMVYAAAVCPISRLTDLRALGVNDSKALREEHRDELRSKIQGAAFLRTFETILTASFLSESMLRKEKYNLNLVSHDAAIGLVQKAMDHGINVAEIYVDTVGNPEQYAAKFRERFSAVEKVVVAKKADATYPIVGAASIVAKTTRDRRIREWCFPEQRRSADFRPGDANIAVQFVGPTGSGYPSDPMTKTWIEHNCDVLFGFPTFVRFSWGTAKVILDKNAVRVEWECDDEENDISTTKVAKKKSVKTKDIKSFFPTKRTASSIG-AKKRKSLKHACPLPQALQSLTLRRAYTL 322          
BLAST of Gcaud6849.t2 vs. uniprot
Match: A0A2V3IEU4_9FLOR (Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU4_9FLOR)

HSP 1 Score: 354 bits (909), Expect = 3.900e-120
Identity = 170/254 (66.93%), Postives = 207/254 (81.50%), Query Frame = 0
Query:    1 MNEDNGGTMWEPGTSCILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVD 254
            M+E    +MW P T C+LGIDEAGR PVLGPMVYAAAVCP S  + LRALG N+SK  +E+ RD+LR +I+ A+FLR FE  LT  +LS NMLR+EKYNLNL+SHD A+GLVQ A+D GINV+EIY+DTVGN + YAAKFR+RF  V+KVVVAKKAD+TYPIVGAASI+AKTTRDR I+EW FPE++RS +F PGDAN  VEF+G   S Y SDP+TKT +E+NCD +FGFPTFVRFSWGT K I+E++AV+ +
Sbjct:    1 MSEATDDSMWYPNTPCVLGIDEAGRRPVLGPMVYAAAVCPMSRLTDLRALGANNSKALREEHRDELRRKIQGAAFLRTFETILTGSFLSENMLRKEKYNLNLVSHDAAIGLVQKAMDHGINVAEIYIDTVGNLQHYAAKFRKRFSAVEKVVVAKKADATYPIVGAASIVAKTTRDRRIREWGFPEQRRSADFRPGDANIAVEFVGSTESSYLSDPITKTCIEQNCDVLFGFPTFVRFSWGTAKVILEKNAVRFE 254          
BLAST of Gcaud6849.t2 vs. uniprot
Match: A0A2V3IRJ3_9FLOR (Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRJ3_9FLOR)

HSP 1 Score: 323 bits (829), Expect = 3.070e-108
Identity = 156/238 (65.55%), Postives = 187/238 (78.57%), Query Frame = 0
Query:    1 MNEDNGGTMWEPGTSCILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFS 238
            M++    +MW P T C+LGIDE  RGPVLGPM YAAAVCP S  + LRAL V DSK  +E+ RD+LRS+I+  +F R FE  LTA +LS +MLR+EKYNLNL+SHD A+GL Q A+D GINV+EIYVDTVGN EQYAA FRERF  V+KVVV KK D+TYP+VGAASI+AKTTRDR I+EWCFPE+++S EF PGDAN  VEF+GP+ S Y SDP+ KT +  NCD +FGFPTF RFS
Sbjct:    1 MSDATDDSMWYPNTPCVLGIDEGRRGPVLGPMAYAAAVCPISRLTDLRALWVKDSKALREKHRDELRSKIQKTAFSRTFETILTASFLSKSMLRKEKYNLNLVSHDAAIGLAQKAVDHGINVAEIYVDTVGNPEQYAAIFRERFSAVEKVVVTKKLDATYPMVGAASIVAKTTRDRGIREWCFPEQRQSAEFRPGDANIAVEFVGPKESAYSSDPIIKTCIGHNCDVLFGFPTFFRFS 238          
BLAST of Gcaud6849.t2 vs. uniprot
Match: UPI001E1D2CDD (ribonuclease H2 subunit A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2CDD)

HSP 1 Score: 270 bits (691), Expect = 4.310e-87
Identity = 141/238 (59.24%), Postives = 166/238 (69.75%), Query Frame = 0
Query:   16 CILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQV 253
            C LGIDEAGRGP LGPMVY+AA C  +    L ALG +DSK   E QRD LR +I+ A FL      L A+ LS  MLR  KYNLN ISHDTAL LV+ AID G++V E+YVDTVGNA+ YA KFR+ FP +DKV+VAKKAD+TY IVGAASI+AKTTRD  ++ W FPEE         D      F    GSGYPSDP TKTW++ + D IFGFPTFVRFSW T + I+++DAV V
Sbjct:   14 CQLGIDEAGRGPCLGPMVYSAAYCALTDIPRLNALGADDSKQLTEDQRDALRVKIDDAQFLGSESIVLHAQELSAKMLRPNKYNLNAISHDTALELVRRAIDRGVDVREVYVDTVGNADSYADKFRDAFPQLDKVIVAKKADATYRIVGAASIVAKTTRDAVVRGWVFPEEV-------ADCAVSPVFAKDYGSGYPSDPRTKTWLKDHVDPIFGFPTFVRFSWSTARIILKRDAVSV 244          
BLAST of Gcaud6849.t2 vs. uniprot
Match: A0A8J4Z438_9CHEL (Ribonuclease H2 subunit A n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4Z438_9CHEL)

HSP 1 Score: 247 bits (631), Expect = 2.440e-77
Identity = 131/264 (49.62%), Postives = 175/264 (66.29%), Query Frame = 0
Query:   16 CILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESAS-FLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVDCEDSKSQTVTKAKSVKTKDIKSFF 278
            C+LGIDEAGRGPVLGPMVY  A CP S A  L+ +G  DSKT  E+ R+KL S + S S F+    + L+  Y+S +ML+R KYNLN +SHD+A+GLVQ A+D+G+N+SE++VDTVG+ ++Y AK    FP ++   VAKKAD+TYPIV AASI AK  RDR +K W F E         G++   V+F    GSGYP+DP TK++M  N DK+FG+P FVRFSW T+++I+++ A+ V   D +           T  I SFF
Sbjct:   29 CLLGIDEAGRGPVLGPMVYGIAFCPVSFAEKLKEMGFADSKTLSEEMREKLFSNLNSESKFIGWKAEILSPNYISNSMLKRGKYNLNALSHDSAIGLVQKALDDGVNLSEVFVDTVGDPKKYEAKLSSIFPNIN-FTVAKKADATYPIVSAASICAKVARDRVVKGWKFME---------GESFNEVKF----GSGYPADPTTKSFMADNVDKVFGYPQFVRFSWSTSETILQKQAISVTWSDEEDDE-------NTPSILSFF 271          
BLAST of Gcaud6849.t2 vs. uniprot
Match: UPI001939C7F0 (ribonuclease H2 subunit A-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939C7F0)

HSP 1 Score: 238 bits (607), Expect = 9.520e-74
Identity = 126/268 (47.01%), Postives = 169/268 (63.06%), Query Frame = 0
Query:   13 GTSCILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESAS--FLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVDCEDSKSQTVTKAKSVKTKDIKSFF 278
            G  C LGIDEAGRGPVLGPMVYA   CP S    L  LG +DSK  +E+QRD+L  ++++ +  F+      L+  Y+S +ML R KYNLN ISHDTA+ L+++  + GI + E+YVDTVG+   Y AK +ERFP++D + V  KAD+TYPIV AASI AK  RD+ +K W F +              +++     GSGYPSDP TK W+ ++ D +FGFP FVRFSW T K+I+E +AV V+  D + +   K  +  T  I SFF
Sbjct:   26 GEPCFLGIDEAGRGPVLGPMVYATCFCPLSCKEKLANLGCDDSKALKEEQRDELFQKLDNCTDDFVGWIINILSPNYISTSMLSRTKYNLNSISHDTAIDLIKSVQNLGIELKEVYVDTVGSPVTYTAKLKERFPSID-ITVESKADATYPIVSAASICAKVCRDKTVKNWKFSD--------------KIQVAENYGSGYPSDPSTKAWLRQSVDPVFGFPDFVRFSWSTAKNILEDEAVAVEWPDEEEEEGDKKSN--TPAITSFF 276          
BLAST of Gcaud6849.t2 vs. uniprot
Match: A0A2B4S2A6_STYPI (Ribonuclease n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4S2A6_STYPI)

HSP 1 Score: 238 bits (606), Expect = 1.350e-73
Identity = 134/275 (48.73%), Postives = 171/275 (62.18%), Query Frame = 0
Query:    8 TMWEPGTSCILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRI-ESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVDCEDSKSQTVTKAKSVKTKDIKSFFPPK 281
            T+ EP   C +GIDEAGRGPVLGPMVY     P S +  ++ LGV DSKT  E+QR++L   I E+  F+      L+  YLS +MLRR KY+LN ISHDTA+GL+   +  GINV EIYVDTVG AE+Y  K ++ FP + K+ VA KAD+ +P+V AASI AK  RDR +KEW +PE               VEF    GSGYPSDP TK W+  + DK+FGFP  VRFSW T  +I++  AV+V  +D+ +   +      T  I SFF PK
Sbjct:   23 TLNEP---CCVGIDEAGRGPVLGPMVYGICYFPLSKSEEVKNLGVADSKTLTEEQREELFKIIDENKEFIGWATDILSPNYLSNSMLRRTKYSLNEISHDTAIGLINLLLSNGINVHEIYVDTVGVAEKYQDKLQKIFPGI-KITVAPKADAKFPVVSAASICAKVARDRILKEWKYPE--------------NVEFHNDHGSGYPSDPTTKKWLTDSVDKVFGFPQLVRFSWSTCNNILDNKAVEVHWDDADNDEDSPPPG--TASITSFFAPK 277          
BLAST of Gcaud6849.t2 vs. uniprot
Match: A0A0G4INT2_PLABS (Ribonuclease n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4INT2_PLABS)

HSP 1 Score: 237 bits (604), Expect = 2.170e-73
Identity = 128/240 (53.33%), Postives = 158/240 (65.83%), Query Frame = 0
Query:   18 LGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVDCED 257
            +GIDEAGRGPVLGP+VY AA CP    + L  LGV DSKT     R++L + I++ +FLR    A+ +  +S  MLRR KYNLNLISHD+A+GLV+  +  G+ V+EIYVDTVG+ ++Y  K    FP   K VV KKADS +PIV AASI AKT RDR + EW F EE        GDA   + F    GSGYPSDP TK W+  +CD++FGFP  VRFSW TTK+I+EQ  V V   D
Sbjct:   16 VGIDEAGRGPVLGPLVYGAAYCPVDRQAQLADLGVADSKTLTADDRERLLAAIDACAFLRYELDAIPSATISALMLRRRKYNLNLISHDSAVGLVRRIMASGVAVAEIYVDTVGDPDKYERKLSALFPQA-KCVVRKKADSLFPIVSAASICAKTARDRLLSEWSFKEEGA------GDA---LPFSRAFGSGYPSDPATKQWLVDHCDRVFGFPDLVRFSWQTTKTILEQRCVSVAWPD 245          
BLAST of Gcaud6849.t2 vs. uniprot
Match: L7MH87_RHIPC (Ribonuclease (Fragment) n=7 Tax=Rhipicephalinae TaxID=426437 RepID=L7MH87_RHIPC)

HSP 1 Score: 238 bits (606), Expect = 2.890e-73
Identity = 132/283 (46.64%), Postives = 180/283 (63.60%), Query Frame = 0
Query:   16 CILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQV--DCEDSKSQTVTKAKSVKTKDIKSFFPPKPKPSDAGPSKRRKLA 296
            CILG+DEAGRGPVLGPMVY  A CP S  S L+ LG  DSKT  E++R++L   +E +SFL    + +    +SG+ML   KY+LN ISHD+A+GL++ A+D+G+ V+++YVDTVG  E+Y  K +  FP + KV VAKKAD+TYPIV AASI AK  RD  I+ W FPE         G   K  E+    GSGYP+DP+TK ++ +N D +FGFP+ VRFSW T + ++E +A  V  D ED+  Q+   +       I+SFF         GP++ +K+A
Sbjct:   53 CILGVDEAGRGPVLGPMVYGIAYCPLSAESQLKELGFADSKTLTEEKREELLKAVEKSSFLGFMVEVIPPSVISGHMLDVTKYSLNAISHDSAIGLIRQALDDGVQVTQVYVDTVGPPEKYQEKLQALFPDI-KVTVAKKADATYPIVSAASICAKVARDHAIQSWEFPE---------GINVKAEEY----GSGYPNDPVTKKFLLENMDTVFGFPSLVRFSWSTAEKLLEDNAAAVMWDEEDNAEQSGMAS-------IQSFF-------QRGPNRGKKVA 307          
BLAST of Gcaud6849.t2 vs. uniprot
Match: UPI001EE60B5A (ribonuclease H2 subunit A-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE60B5A)

HSP 1 Score: 236 bits (601), Expect = 7.870e-73
Identity = 132/279 (47.31%), Postives = 178/279 (63.80%), Query Frame = 0
Query:   16 CILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRALGVNDSKTFQEQQRDKLRSRIESAS-FLRIFEKALTAEYLSGNMLRREKYNLNLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKVVVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKRVEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDAVQVDCEDSKSQTVTKAKSVKTKDIKSFFPPKPKPSDAGPSKRR 293
            C LGIDEAGRGPVLGPMVY  A CP S    L+ +G+ DSKT  E+QR+ +  +I++A+  +    + LT  Y+S +MLRR KYNLN +SHD+A+GL+Q A+  G N++E+YVDTVG+  +Y AK ++ FP +D + VAKKAD+TYPIV  ASI AK  RD+ +K W F +E   KE         +E+    GSGYP+DP TK ++ +N D +FGFP FVRFSW T   ++E+D V V  ED       +AK+  +  + SFF  K K  D    K R
Sbjct:   29 CCLGIDEAGRGPVLGPMVYGIAYCPLSQQEKLKEMGLADSKTLSEEQRESMLEKIKAAADTVGWIVEILTPAYISNSMLRRTKYNLNALSHDSAIGLLQRALSLGANITEVYVDTVGDPAKYQAKLKDIFPDID-ITVAKKADATYPIVSGASICAKVARDQAVKSWQF-QELVGKE--------GLEY----GSGYPADPGTKKFLAENMDPVFGFPDFVRFSWSTASQMIEKDCVPVKWEDDDED---EAKNTGSASLLSFF--KKKTEDPRQQKHR 288          
The following BLAST results are available for this feature:
BLAST of Gcaud6849.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II70_9FLOR1.020e-15067.18Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A2V3IEU4_9FLOR3.900e-12066.93Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A2V3IRJ3_9FLOR3.070e-10865.55Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
UPI001E1D2CDD4.310e-8759.24ribonuclease H2 subunit A-like n=1 Tax=Mercenaria ... [more]
A0A8J4Z438_9CHEL2.440e-7749.62Ribonuclease H2 subunit A n=1 Tax=Nymphon striatum... [more]
UPI001939C7F09.520e-7447.01ribonuclease H2 subunit A-like n=1 Tax=Styela clav... [more]
A0A2B4S2A6_STYPI1.350e-7348.73Ribonuclease n=2 Tax=Pocilloporidae TaxID=46729 Re... [more]
A0A0G4INT2_PLABS2.170e-7353.33Ribonuclease n=1 Tax=Plasmodiophora brassicae TaxI... [more]
L7MH87_RHIPC2.890e-7346.64Ribonuclease (Fragment) n=7 Tax=Rhipicephalinae Ta... [more]
UPI001EE60B5A7.870e-7347.31ribonuclease H2 subunit A-like n=2 Tax=Haliotis Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023160Ribonuclease HII, helix-loop-helix cap domain superfamilyGENE3D1.10.10.460Ribonuclease hii. Domain 2coord: 206..251
e-value: 3.4E-20
score: 73.4
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 18..241
e-value: 5.8E-49
score: 166.6
IPR004649Ribonuclease H2, subunit ATIGRFAMTIGR00729TIGR00729coord: 17..246
e-value: 4.7E-48
score: 161.9
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 5..189
e-value: 6.6E-59
score: 200.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..298
NoneNo IPR availablePANTHERPTHR10954:SF7RIBONUCLEASE H2 SUBUNIT Acoord: 15..287
NoneNo IPR availableCDDcd07181RNase_HII_eukaryota_likecoord: 18..251
e-value: 1.05467E-124
score: 354.132
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 15..287
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 16..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_57_length_62185_cov_4.475151contigNODE_57_length_62185_cov_4.475151:46859..47911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6849.t2Gcaud6849.t2Gracilaria caudata M_176_S67 malemRNANODE_57_length_62185_cov_4.475151 46859..47911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6849.t2 ID=Gcaud6849.t2|Name=Gcaud6849.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=319bp
MNEDNGGTMWEPGTSCILGIDEAGRGPVLGPMVYAAAVCPKSHASSLRAL
GVNDSKTFQEQQRDKLRSRIESASFLRIFEKALTAEYLSGNMLRREKYNL
NLISHDTALGLVQNAIDEGINVSEIYVDTVGNAEQYAAKFRERFPTVDKV
VVAKKADSTYPIVGAASIMAKTTRDRHIKEWCFPEEQRSKEFEPGDANKR
VEFIGPRGSGYPSDPLTKTWMEKNCDKIFGFPTFVRFSWGTTKSIMEQDA
VQVDCEDSKSQTVTKAKSVKTKDIKSFFPPKPKPSDAGPSKRRKLARVSC
PMPQVLKSMALRRTPTLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023160RNase_HII_hlx-loop-hlx_cap_dom
IPR024567RNase_HII/HIII_dom
IPR004649RNase_H2_suA
IPR036397RNaseH_sf
IPR001352RNase_HII/HIII
IPR012337RNaseH-like_sf