Gcaud6796.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6796.t1
Unique NameGcaud6796.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length233
Homology
BLAST of Gcaud6796.t1 vs. uniprot
Match: A0A2V3J389_9FLOR (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J389_9FLOR)

HSP 1 Score: 344 bits (883), Expect = 5.840e-118
Identity = 164/232 (70.69%), Postives = 196/232 (84.48%), Query Frame = 0
Query:    1 MSNPPQHLSFYSHVKRNNPNFTPNVTCPQAETQPDLLVDNTPYSRFYHLTVTDASKRPQYDLVAIAEPTGAITLPVNEHNQIALIRQWRSVPSSVPGSEAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAISYAFAARGRIAQFVKER 232
            M+ PPQHL+F+S VK  NP+F PNVT        DLLVDN+P+SRFYH+ V DAS++P+YDLVAIAEPTGAITLPV++ N+IALIR WR++PS+VPGS  FN PL+S HGFYS ELPRGFPE  E+H DAAAREVREELG+ T++V QLGWCNFNTAIAMTDIPV+AVLVD  + V+D KDEAEVID +EW+SME+LGD V+ G IRC LTLAAISYAFAARG+IA+FV++R
Sbjct:    1 MTTPPQHLAFFSDVKGKNPDFQPNVTRSGLNQNTDLLVDNSPFSRFYHVVVNDASRQPRYDLVAIAEPTGAITLPVDDQNRIALIRHWRAIPSTVPGSVPFNNPLKSSHGFYSIELPRGFPERDETHCDAAAREVREELGIGTRKVCQLGWCNFNTAIAMTDIPVFAVLVDPQEKVTDSKDEAEVIDSIEWVSMEQLGDYVLSGAIRCALTLAAISYAFAARGQIAEFVRKR 232          
BLAST of Gcaud6796.t1 vs. uniprot
Match: A0A1X6NYK3_PORUM (Nudix hydrolase domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYK3_PORUM)

HSP 1 Score: 117 bits (293), Expect = 1.760e-27
Identity = 65/138 (47.10%), Postives = 81/138 (58.70%), Query Frame = 0
Query:   36 LLVDNTPYSRFYHLTVTDASKRPQYDLVAIAEPTGAITLPVNEHNQIALIRQWRSVPSSVPGSEAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGV---ATKRVWQLGWCNFNTAIAMTDIPVYAVLV 170
            LLV N PYS  +HL V      P YD+  IAEP GA+ LPV    ++AL+R +R VP++              HGF S E PRGFP  GES A AA REV EE+G+   A   V  LGW N NT++ ++DIPV+AV V
Sbjct:   65 LLVANAPYSVVHHLAVLAGDGTPLYDVPGIAEPRGAVGLPVAADGRVALLRTYRPVPAAXXXXXXXXXXXXGGHGFVSVEAPRGFPAGGESAAAAAMREVAEEVGLPPSAVGGVRPLGWVNVNTSVYLSDIPVFAVRV 202          
BLAST of Gcaud6796.t1 vs. uniprot
Match: UPI001F1803E5 (NUDIX hydrolase n=1 Tax=Yinghuangia sp. KLBMP8922 TaxID=2908204 RepID=UPI001F1803E5)

HSP 1 Score: 75.5 bits (184), Expect = 4.640e-13
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  110 GFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAISYAFAAR 222
            G  S E PRG  + GE   + A RE+REE G+    V ++G  +  T +  T + VY  +VD +  V+ Q +  E +    W+   +LG  +  G I CG+TLAA++ A AAR
Sbjct:   76 GTASLEFPRGARDPGEQAHETAVRELREEAGLVATSVHEVGMLHPETGLIETPVHVYRAIVDPSQSVAAQPETMESVCNPIWVPWGDLGSWLRAGRITCGVTLAALTLAVAAR 188          
BLAST of Gcaud6796.t1 vs. uniprot
Match: A0A8I1JIK1_PSEPU (NUDIX hydrolase n=1 Tax=Pseudomonas putida TaxID=303 RepID=A0A8I1JIK1_PSEPU)

HSP 1 Score: 59.7 bits (143), Expect = 1.700e-7
Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 0
Query:  110 GFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAISYAFAA 221
            G  S E PRG  + GE+ A+AA RE+ EELG+   RV +LG  + NT++  + + +YAV V  T  V  + D   +   V+  + EE+ + +  G+I  G T++A+    +A
Sbjct:   69 GTMSIEFPRGKVDDGENPAEAAIRELMEELGMKALRVKELGKMHSNTSLLSSAVAIYAVSV--TGEVEGETDGEVMSTMVK--TPEEIQEMIFNGSITDGHTISALMMLISA 176          
BLAST of Gcaud6796.t1 vs. uniprot
Match: UPI001C051A56 (NUDIX hydrolase n=1 Tax=Actinoplanes bogorensis TaxID=1610840 RepID=UPI001C051A56)

HSP 1 Score: 61.2 bits (147), Expect = 2.540e-7
Identity = 51/174 (29.31%), Postives = 79/174 (45.40%), Query Frame = 0
Query:   53 DASKRPQYDLVAIAEPTGAITLPVNEHNQIALIRQWRSVPSSVPGSEAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEA--EVIDKVEWISMEELGDRVMKGNIRCGLTLAAISYAFAARGR 224
            D + RP + L+   +  GA  LP+    ++ L+R++R         EA +         +  E+PRGFPE GE+    AARE+ EELGV    + +LG           +  +Y    D   L     D A  E +D+V  ++ +EL   +++G I     LAA +   A R R
Sbjct:  314 DGAVRPYFRLIGAVDSPGAAVLPMLSDGRLVLVRRFRH--------EARD---------WRWEVPRGFPEPGETGPVTAARELGEELGVNDPHLERLG--------VYGEDEIYLARFDADRLPERLTDGAVEEGVDEVRVVTADELAGLIVEGRITDEFLLAAYAMLQARRSR 462          
BLAST of Gcaud6796.t1 vs. uniprot
Match: A0A2G6KIX4_9BACT (NUDIX hydrolase n=1 Tax=candidate division KSB3 bacterium TaxID=2044937 RepID=A0A2G6KIX4_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 4.780e-7
Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  113 STELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAIS 216
            +TE+P G  E GESH +AA RE+ EE G +T R   LGW   N A        + V  D         D+ E I  V+ +S+EE+ D++ KG++R  L L  +S
Sbjct:   95 TTEIPAGIIEDGESHENAAKRELLEETGYSTDRWEYLGWVEPNPAFQNNRCHQW-VARDVRRTNRQNLDDGEAI-AVQELSVEEVRDKIHKGDMRNSLALLTLS 196          
BLAST of Gcaud6796.t1 vs. uniprot
Match: UPI0011EDE980 (NUDIX hydrolase n=1 Tax=Actinomadura sp. K4S16 TaxID=1316147 RepID=UPI0011EDE980)

HSP 1 Score: 58.9 bits (141), Expect = 5.150e-7
Identity = 46/149 (30.87%), Postives = 70/149 (46.98%), Query Frame = 0
Query:   70 GAITLPVNEHNQIALIRQWRSVPSSVPGSEAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAISYA 218
            GA  LPV++  +I L+R +R                      +  E+PRGFPE G+S    A REV EE+G +   +  LG    +T IA + + ++   V   DL   +    E ID +E ++ E L   + +G I    TLAA+ +A
Sbjct:   77 GAAVLPVHD-GRIVLLRHFRHSTRQ-----------------WHWEIPRGFPEPGDSPERTARREVEEEIGASPSSIEFLGDVYADTGIAASKVGLFWAAVGEPDLSLRE----EGIDLIEPVTPERLDLMLEQGEITDSFTLAAVLHA 203          
BLAST of Gcaud6796.t1 vs. uniprot
Match: A0A838HQX0_9BACT (NUDIX hydrolase n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838HQX0_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 5.670e-7
Identity = 42/146 (28.77%), Postives = 68/146 (46.58%), Query Frame = 0
Query:   70 GAITLPVNEHNQIALIRQWRSVPSSVPGSEAFNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAI 215
            G + +P+   ++I LIRQ+R                  P   +  ELPRG    GES A+ A+RE+REE+G   +  + LG    N +  +T +P + V     D+   + +  E ID++   +  EL     +G+I    TL A+
Sbjct:   69 GVVVVPITHDDRILLIRQFRH-----------------PIRMWMRELPRGARNRGESPANTASRELREEIGYEAEATYSLGRIA-NDSGQLTGLP-FLVAARVRDVGESEPEATEAIDQILSYTFSELKRACQRGDIIDSFTLCAV 195          
BLAST of Gcaud6796.t1 vs. uniprot
Match: A0A4Q8BFQ9_9ACTN (ADP-ribose pyrophosphatase n=1 Tax=Micromonospora kangleipakensis TaxID=1077942 RepID=A0A4Q8BFQ9_9ACTN)

HSP 1 Score: 57.8 bits (138), Expect = 1.750e-6
Identity = 52/175 (29.71%), Postives = 74/175 (42.29%), Query Frame = 0
Query:   53 DASKRPQYDLVAIAEPTGAITLPVNEHNQIALIRQWRSVPSSVPGSEAFNKPLESPHGF--YSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLGWCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDRVMKGNIRCGLTLAAISYAFAARGRI 225
            D    P   L+     TGA  LP+    QI L+R +R                   HG   +  E+PRGF E G   A  AARE+ EE+GVAT ++  LG        A  +I +  +  D   ++   +   E ID+    +  EL   +  G I     LAA ++A  A+G I
Sbjct:   86 DGKIGPYIRLLGADSGTGAAILPMLNDGQILLVRHFR-------------------HGLRGWQWEIPRGFSEGGADGATTAARELAEEIGVATAKIEPLG--RLAAEGAFDEIYLARLAADTLPVMLPAEAVTEGIDERRLCTSAELAAMIAAGEITDQYLLAAWAFA-TAKGHI 238          
The following BLAST results are available for this feature:
BLAST of Gcaud6796.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3J389_9FLOR5.840e-11870.69Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A1X6NYK3_PORUM1.760e-2747.10Nudix hydrolase domain-containing protein n=1 Tax=... [more]
UPI001F1803E54.640e-1336.28NUDIX hydrolase n=1 Tax=Yinghuangia sp. KLBMP8922 ... [more]
A0A8I1JIK1_PSEPU1.700e-734.82NUDIX hydrolase n=1 Tax=Pseudomonas putida TaxID=3... [more]
UPI001C051A562.540e-729.31NUDIX hydrolase n=1 Tax=Actinoplanes bogorensis Ta... [more]
A0A2G6KIX4_9BACT4.780e-737.50NUDIX hydrolase n=1 Tax=candidate division KSB3 ba... [more]
UPI0011EDE9805.150e-730.87NUDIX hydrolase n=1 Tax=Actinomadura sp. K4S16 Tax... [more]
A0A838HQX0_9BACT5.670e-728.77NUDIX hydrolase n=2 Tax=Gemmatimonadetes bacterium... [more]
A0A4Q8BFQ9_9ACTN1.750e-629.71ADP-ribose pyrophosphatase n=1 Tax=Micromonospora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 35..230
e-value: 1.9E-27
score: 98.0
NoneNo IPR availableCDDcd03424ADPRase_NUDT5coord: 68..222
e-value: 8.79704E-19
score: 77.5301
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 74..197
e-value: 3.1E-11
score: 43.4
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 55..214
score: 12.76717
IPR020084NUDIX hydrolase, conserved sitePROSITEPS00893NUDIX_BOXcoord: 119..140
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 43..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1092_length_13964_cov_4.872991contigNODE_1092_length_13964_cov_4.872991:3541..4239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6796.t1Gcaud6796.t1Gracilaria caudata M_176_S67 malemRNANODE_1092_length_13964_cov_4.872991 3541..4239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6796.t1 ID=Gcaud6796.t1|Name=Gcaud6796.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=233bp
MSNPPQHLSFYSHVKRNNPNFTPNVTCPQAETQPDLLVDNTPYSRFYHLT
VTDASKRPQYDLVAIAEPTGAITLPVNEHNQIALIRQWRSVPSSVPGSEA
FNKPLESPHGFYSTELPRGFPEHGESHADAAAREVREELGVATKRVWQLG
WCNFNTAIAMTDIPVYAVLVDHTDLVSDQKDEAEVIDKVEWISMEELGDR
VMKGNIRCGLTLAAISYAFAARGRIAQFVKER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase-like_dom_sf