Gcaud6787.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6787.t1
Unique NameGcaud6787.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length469
Homology
BLAST of Gcaud6787.t1 vs. uniprot
Match: A0A2V3IEM7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM7_9FLOR)

HSP 1 Score: 535 bits (1377), Expect = 2.970e-185
Identity = 262/460 (56.96%), Postives = 340/460 (73.91%), Query Frame = 0
Query:    1 MAEDSTAIKLLCMLPSFGTAKVLKQLYDAINTDLPHNLRSTVVPSPPS-IPDATVLHFNFDEGHSARFMVPDTNGGSVSFEWVMIRPQPMQFLMTHIAVRAPIIPASSEHVIFMPGLNTVQEPRPGETTTETRLRYYVRVLRNIPMVQLHSGSSKDQGDVRLHAKRAYMLRFLVMAIRPVLPDRMEPRIEGPDMIWSSGQLDYVQAALSAFNLIDTPLKARIRDILERTKRPNAEPVVLVGYSRSSIDVRAALEKHIEECIEKDEPQEQIESRLRKLVTVVTIGPGTTGYPDGPAYVHIATYQDPLARLAGVTSRTSADRAGKDAMFVNTDSPFAEGSFDSHNFGAVTVQYLAILMQANGVRGFRELWDKHMDGEIVVPKNVDVLLKAMMVLTDGTQWLFSPQAAWKGLGRDWLPDPATSEKVVREALGDKYADWVISEFGTPQEPKNGPRSIEDHVEED 459
            MA D  AI  L  +    +AK L++L+DA+N +LP +L+ST VP+PPS IPDATVLHFN+DEGHSARF VP T GGSV FE+VM RP P++FL+T +++ AP    + E+ IFMPGLNT+ EP+PGETTTE RL YYVRVLR+  M QLH G+S DQGDVRL AKRA  LR  V A+  V+PD  EP+I+G D+IWS+ QLD++Q  LS+FNLIDTPLK R+RD+L+R+  P+ E VVLVGYSRSS+D+R+A++ +I +       ++ ++  LR  VTVVT+G  T GYPDGPAYVH+A ++DPLA  +GVTS+ +A+RAGKDA+F+N  SPFA G+FDSHNFGA++ QYL++ M ANG  G R+LW+K       VP N D LL+AM+V TDGTQWL+SP+ AWKG+  D LPDP  +E V+RE  GD + D +I +FG P  PK GPRS+    + D
Sbjct:    1 MAFDLEAISALLCIGKLPSAKALQELFDALNPELPKDLKSTEVPAPPSPIPDATVLHFNYDEGHSARFTVPQTQGGSVDFEYVMDRPTPLKFLITTLSIPAPEPAPNMENTIFMPGLNTLHEPKPGETTTEQRLEYYVRVLRSPTMAQLHPGTSLDQGDVRLSAKRAVALRLAVSALSAVVPDTFEPKIDGDDVIWSARQLDFIQTGLSSFNLIDTPLKQRLRDLLKRSCAPDGESVVLVGYSRSSVDIRSAVQDYIRQQKADGVEEDVVQRTLRDRVTVVTVGSATAGYPDGPAYVHLAAFEDPLASASGVTSKHNANRAGKDAVFLNFTSPFARGAFDSHNFGALSSQYLSVAMAANGATGLRDLWEKVQQNGKKVPPNEDELLRAMIVCTDGTQWLWSPEEAWKGVSVDALPDPDRAEAVLREGFGDAFVDALIRDFGKPAVPKFGPRSVSVSADGD 460          
BLAST of Gcaud6787.t1 vs. uniprot
Match: A0A1X6NVN5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVN5_PORUM)

HSP 1 Score: 168 bits (426), Expect = 7.920e-44
Identity = 120/398 (30.15%), Postives = 186/398 (46.73%), Query Frame = 0
Query:   55 LHFNFDEGHSARFMVPDTNGGSVSFEWVMIRPQPMQFLMTHIAVRAPIIPAS-------SEHVIFMPGLNTVQEPRPGETTTET-RLRYYVRVLRN-IPMVQLHSGSSKDQGDVRLHAKRAYMLRFLVM-AIRPVLPDR---MEPRIEGPDM---IWSSGQLDYVQAALSAFNLIDTPLKARIRDILERTKR------------PNAEPVVLVGYSRSSIDVRAALEKHIEECIEKDEPQEQIESRLRKLVTVVTIGPGTTGYPDGPAYVHIATYQDPLARLAGVTSRTSADRAGKDAMFVNTDSPFAEGSFDSHNFGAVTVQYLAILMQANGVRGFRELWDKHMDGEIVVPKNVDVLLKAMMVLTDGTQWLFSPQAAWKGLGRDWLPDPATSEKVVR 424
            + FN+D GH  R  VP ++GGSV   W + R  P   L   +A  A  + A         E   F PGLNT+ +    + T+   R+ +Y R+L     + QLH G+  DQGD  +    A    F  + A+   L        PR+   D       S   D VQ  LS  N +DT LKA  R ++                 P A  +VL+ YSRS+++V AA    +         +  + +RLR  + +VTIG     YP G AY+H+++  D L    GV++   A   G  A FV+  SPF EG  ++HNF  +   ++A     +GV G+  +++    G    P++++ L +A MV++   ++LF+P A W  +G   LPD   + +++R
Sbjct:    1 MRFNYDAGHDGRVSVPGSDGGSVDLRWALRRGAPWAALTGRLAFTAAPVGAGPDTRAGGGEVAFFSPGLNTLHQSVTWDKTSSVDRVVHYARLLGGGWSLAQLHCGTLMDQGDSPIRLAGAPPPLFAALSAVEAALVAAGVANVPRLADADAETAFLPSRARDAVQTVLSTLNAVDTRLKAAYRLLMAAAAGEPLPSSAGLAAVPPAPRLVLITYSRSTVEVAAAARAFL--AAHPRATRAAVAARLRARLLIVTIGACARSYPPGLAYLHVSSPADTLTSRFGVSADRPAGAGGDGAAFVHPPSPFFEGELEAHNFATLLCPHVAARAAVHGVVGWWGVYEAVRAGRFGAPRDMEDLTRAAMVVSGAERFLFAPDATWASVGVTGLPDRDAALRLLR 396          
The following BLAST results are available for this feature:
BLAST of Gcaud6787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEM7_9FLOR2.970e-18556.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NVN5_PORUM7.920e-4430.15Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_462_length_24733_cov_4.705949contigNODE_462_length_24733_cov_4.705949:5583..6989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6787.t1Gcaud6787.t1Gracilaria caudata M_176_S67 malemRNANODE_462_length_24733_cov_4.705949 5583..6989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6787.t1 ID=Gcaud6787.t1|Name=Gcaud6787.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=469bp
MAEDSTAIKLLCMLPSFGTAKVLKQLYDAINTDLPHNLRSTVVPSPPSIP
DATVLHFNFDEGHSARFMVPDTNGGSVSFEWVMIRPQPMQFLMTHIAVRA
PIIPASSEHVIFMPGLNTVQEPRPGETTTETRLRYYVRVLRNIPMVQLHS
GSSKDQGDVRLHAKRAYMLRFLVMAIRPVLPDRMEPRIEGPDMIWSSGQL
DYVQAALSAFNLIDTPLKARIRDILERTKRPNAEPVVLVGYSRSSIDVRA
ALEKHIEECIEKDEPQEQIESRLRKLVTVVTIGPGTTGYPDGPAYVHIAT
YQDPLARLAGVTSRTSADRAGKDAMFVNTDSPFAEGSFDSHNFGAVTVQY
LAILMQANGVRGFRELWDKHMDGEIVVPKNVDVLLKAMMVLTDGTQWLFS
PQAAWKGLGRDWLPDPATSEKVVREALGDKYADWVISEFGTPQEPKNGPR
SIEDHVEEDNAGWGCPLS*
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