Gcaud6786.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6786.t1
Unique NameGcaud6786.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length305
Homology
BLAST of Gcaud6786.t1 vs. uniprot
Match: R7QVA1_CHOCR (Glycoside hydrolase family GH16 Endohydrolysis of (1-4)-beta-D-linkages of galactans n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVA1_CHOCR)

HSP 1 Score: 214 bits (546), Expect = 9.300e-65
Identity = 113/261 (43.30%), Postives = 153/261 (58.62%), Query Frame = 0
Query:   44 PRHMKWVMDWNMSDEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFIDQRDRE---IDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIKYSGPRGRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYG-HKK-LPNAWTIYYVRSY 299
            P H  WV +W MSDEF+ +  ++W    +W   NP W GR PS+F K+NV +++ ++ L SRE+   A           Y+      +ST F+RT ++  YGYFEI C++MD  +S AFWF      E   +DVFEYSTS+K          P+K+ FNTN+  +  P G  + S P   D G DLS + +KVG  W+ D + WYLND+ +R E+N  FH PL+LQLDSE F  WFG P   G HK  LPNA+ I+YVRS+
Sbjct:   19 PNHC-WVQNWEMSDEFERSLTDSWMRRQRWETINPTWKGRAPSFFKKDNVIVQNGSMKLRSREDNPPA-----------YFPSMYKDFSTAFVRTRKRSLYGYFEIYCRMMDSKISSAFWFAYNTPNEWTELDVFEYSTSDKPTSFGK----PYKQLFNTNMHVHRNPNGVKMSS-PQVYDAGFDLSAQPVKVGFNWQEDKIQWYLNDKLVREEKNEYFHQPLHLQLDSEAFPIWFGLPETGGCHKNSLPNAFEIFYVRSW 262          
BLAST of Gcaud6786.t1 vs. uniprot
Match: D5EKY6_CORAD (Glycoside hydrolase family 16 n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EKY6_CORAD)

HSP 1 Score: 120 bits (300), Expect = 1.110e-28
Identity = 79/261 (30.27%), Postives = 122/261 (46.74%), Query Frame = 0
Query:   44 PRHMKWVMDWNMSDEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFIDQRDRE---IDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIKYSGPR-GRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQ 300
            P    WV    M+DEFD    +    + KW  +NP W GREP YFSK+NV + D  L L ++ E+        +     Y++     ++T  +++    +YGYFEI  K MD   S AFWF + +  E   IDVFE S          G     +R ++  +  +  P  G+    +    +     + +    GL W  + + WY++   +R  +N  +H PL +  DSE F  WFG P      +LP  ++I YVR++Q
Sbjct:   21 PEGADWVPVPAMTDEFDGTELD----ASKWYDHNPTWMGREPGYFSKDNVAVYDGKLHLTAKAEQL-------DDLPKGYHS-----FTTAAVKSKTLIQYGYFEIKAKAMDSHASSAFWFYNHQPEEWTEIDVFEIS----------GGSPKKQRTYHMTVHVFITPEDGKKHWQNGTTWEAPFRFADDYHVYGLEWDAETIKWYVDGELVRVLKNTHWHQPLTMNFDSETFPHWFGLPDA---SELPATYSIEYVRAWQ 252          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A2V3IL69_9FLOR (Beta-porphyranase A n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL69_9FLOR)

HSP 1 Score: 117 bits (292), Expect = 7.870e-27
Identity = 85/273 (31.14%), Postives = 137/273 (50.18%), Query Frame = 0
Query:   42 EVPRHMKWVMDWNMSDE--FDTNPPENWYGSGKWVRYNPQWAGREPS-YFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLW----NARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFIDQR--DREIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIKYSGPRGRNVQSDPFKIDVGRDLSQEK-IKVGLLWKPDVLVWYLNDREIRR-ERNNDF-HIPLYLQLDSEVFDCWFGEPG-QYGHKKLPNAWTIYYVRSYQM 301
            E  R+    ++ N+S++   D+N   NW     W        GR P+ +F+KN++   +  + + +  + +  E      +       W       Y T F R+ ++  YGY EIACKL D  +S AFW  + R  +REIDVFE+STS+K      G   PF   +N N+ K++     + Q     I++  +LSQ++ IK+G LW    L WY+ND EIR+ + N +F  + + +QLD E    WFG P  + G       + ++YVR++ +
Sbjct:   67 EFERNDSLSIELNVSNDQTVDSNQLRNWTTENAWT-------GRFPAIFFAKNSIVSNNCLVQVVNIADSSDRETIRQECSDDEDAQKWIEDGKDVYDTTFFRSEQQMMYGYVEIACKLGDSSLSSAFWLKEHRGLEREIDVFEFSTSKK----DSGYSAPFSNMYNMNIHKFTTDGDFSAQRS---INMCTNLSQQELIKIGFLWTTTHLHWYINDVEIRKVQHNGEFCDLGMNIQLDREYLS-WFGLPNDEQGGTDTFGDFVVHYVRTWNI 324          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A7V2Y2F3_9BACT (Glycosyl hydrolase family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y2F3_9BACT)

HSP 1 Score: 118 bits (296), Expect = 4.520e-26
Identity = 81/251 (32.27%), Postives = 121/251 (48.21%), Query Frame = 0
Query:   57 DEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFIDQRD---REIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIKYSGPRGRNVQSDPFKID----VGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQ 300
            DEFD +  +    + KW   NP W GR+P YFS +NV +RD AL L +R +      +A        YN     ++T  +++ E+ +YGYFE+  + M    S AFWF D +     EIDVFE            G    F+RK++  +     P    V  + F++        DL+ +    GL W    L +Y++ + +R   N D+H PL L  DSE    WFG P     K LP+ ++I YVR+++
Sbjct:  656 DEFDGDRLD----TAKWWPNNPTWKGRQPGYFSPDNVNVRDGALHLTTRAQEPPEALKAEG------YNT----FTTAAVQSKERVRYGYFEVKARAMASGASSAFWFYDAQPDWWTEIDVFEIG----------GRARGFERKYHMTVHVMKTP----VTKEHFQVGDFWLAPFDLADDYHVYGLEWDERELKFYVDGQMVRSGPNTDWHQPLTLNFDSETMPEWFGLPDP---KDLPSTFSIEYVRAWK 875          
BLAST of Gcaud6786.t1 vs. uniprot
Match: R7Q792_CHOCR (Glycoside hydrolase family GH16 putative kappa-carrageenase hydrolytic cleavage of beta-1, 4-galactan linkages n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q792_CHOCR)

HSP 1 Score: 112 bits (281), Expect = 6.860e-26
Identity = 69/256 (26.95%), Postives = 120/256 (46.88%), Query Frame = 0
Query:   52 DWNMSDEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFIDQRDR---EIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNL--IKYSGPRGRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQMA 302
            DW    E   +   +   + KW  +N  W GR P +F+ +NV +   +L L SR E A A           Y   ++  +ST F+R+  + KYG+ E   +  D   S +FW +  +     EIDVFE S +              +RKF+ N+   +  G +     S P  + + R + ++ + V + W  + + W +  + +RRE+N  ++  ++LQ D E    WFG P + G  +LP  + ++ VR+++ A
Sbjct:   30 DWQPVPELSDDFSGSALDTTKWEPFNKTWKGRAPGWFNPSNVTVSGGSLNLSSRVEEAPA----------GYPEKFHT-FSTSFVRSKARIKYGFIEAVVQTADSVTSSSFWLVHNQQEDWNEIDVFESSQA-----------AGHERKFHMNMHVFRKDGAKLAQTYSKPKWVQLERRMCEKALVVAVAWDEEYVTWLVEGKVVRREKNEAWNHEMWLQFDCETMGGWFGLP-EVGDGRLPAVFRVFAVRTWKKA 262          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A2V3IVF4_9FLOR (Beta-porphyranase A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVF4_9FLOR)

HSP 1 Score: 112 bits (279), Expect = 2.300e-25
Identity = 71/256 (27.73%), Postives = 114/256 (44.53%), Query Frame = 0
Query:   49 WVMDWNMSDEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFID---QRDREIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNL-IKYSGPRGRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQ 300
            W +   +SDEF+ N  +    + KW  +N  W GR P +F+  NV + D  L L SR +            +   Y+     +ST F+R+  K +YGYFE   +     +S AFWF+    +   EIDVFE S      D H+ S+      F     +           + PF++        +     L W P  L W ++ + +R+  N  +H  +++Q DSE    WFG P     + +P  + +YY+R++Q
Sbjct:   55 WTLVEQVSDEFEGNSLD----TSKWEPFNRNWRGRPPGWFNSENVTVGDDCLQLHSRLQDPPP-------GYPPDYHT----FSTAFVRSKTKVRYGYFEARVQPARSCISSAFWFVRNDAEAWNEIDVFEVSNK----DGHECSFTMNAHVFRKGTQVMQRKLHHAQATTLPFRV------CDQPFTAALDWTPQYLKWLVDGKVVRQLPNEHWHDHMWVQFDSETMPNWFGNPSCEDDRDVPCCYKVYYIRAWQ 285          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A1G0ZTS2_9BACT (GH16 domain-containing protein n=1 Tax=Lentisphaerae bacterium RIFOXYA12_FULL_48_11 TaxID=1798578 RepID=A0A1G0ZTS2_9BACT)

HSP 1 Score: 108 bits (269), Expect = 6.530e-24
Identity = 71/265 (26.79%), Postives = 120/265 (45.28%), Query Frame = 0
Query:   49 WVMDWNMSDEFDTNPPENWYGSG----KWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFIDQRD-----------REIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIK-YSGPRGRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVR 297
            WV++   SDEF+        G G    KW  +NP+W GR+P YFS+ NV ++D  L L ++ ++   E    N      Y+    +++T  +++ ++  YGYFE  CK M   +  AFW  D  +            EID+FE    +     +D  Y     +F T  ++  +  +  ++     K  +  D   +    G LW P  + W+++ +E+    N+ +  PLY+  D E+   W G P       LP+ + I Y+R
Sbjct:   30 WVLEQVFSDEFN--------GQGLDGEKWWDFNPEWYGRKPGYFSRENVTVKDGKLCLTAKVQKPE-EVTVENKVRG--YD----KFTTSTVKSKKRILYGYFEARCKSMKASICNAFWLYDPLNPPAKYKEGSFSEEIDIFEIF-GKPAKKEYDRVYCTTVHRFYTPYVESIANAKQTSLPKKAMKQKLPFDFHADFHVYGFLWTPTEMKWFVDGKEVFARDNDYYSTPLYIMFDCEIMKDWVGLPDP---ADLPSTFEIDYLR 275          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A6C2UT86_9BACT (Beta-porphyranase B n=2 Tax=Pontiella sulfatireligans TaxID=2750658 RepID=A0A6C2UT86_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 1.270e-19
Identity = 72/254 (28.35%), Postives = 121/254 (47.64%), Query Frame = 0
Query:   55 MSDEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKAL--WLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFID---QRDREIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIK---YSGPRGRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQ 300
            MSDEF+    ++     KW  +NP W+GR P+ F  + V + +  L  W    EE A  +  +A T            + +GF+R+ E+ ++GYFE+  KLM+      FW      +   EID+ E +      + H     P     NT+  +   YSG    N   DP   ++G ++S++    G+ W P  + WY++ + IR + N+++  PL + L+ E  + WFG         LP ++ I YVR+++
Sbjct:   45 MSDEFNAKKLDH----KKWYDHNPTWSGRPPTLFHPDCVAVSNGLLHIWAFDSEESAKRKMPSAFT------------HLSGFVRSKERARFGYFEMRAKLMNSSQVSCFWLTHAGREEWSEIDIVEVAAGL---EQHATQLRP-----NTHYFRGPHYSGTL-HNHLVDPTHHELGFNMSEDFHVYGMEWAPTFIRWYVDGKLIREKHNDNYFQPLEMNLNIEA-NQWFGALPD--DATLPASYRIDYVRTWR 270          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A4P6P8X5_9BACT (Glycosyl hydrolase family protein n=1 Tax=Verrucomicrobia bacterium S94 TaxID=2488809 RepID=A0A4P6P8X5_9BACT)

HSP 1 Score: 95.1 bits (235), Expect = 2.210e-19
Identity = 74/269 (27.51%), Postives = 122/269 (45.35%), Query Frame = 0
Query:   42 EVPRHMKWVMDWNMSDEFDTNP--PENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKALWLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIACKLMDCPVSCAFWFID---QRDREIDVFEYSTSEKVPDVHDGSYVPFKRKFNTNLIKYSGPRGRNVQS----DPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHI-PLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQ 300
            + P   +WV+   M+DEFD +   PE WY       +NP W+GR P+ F  + V + +  L + + + +ASA  +      S + ++      +GF+R+ ++ ++GYFE+  KLM       FW      +   EID+ E +   +           +      N+  + GP  +        DP   D+G  L  +       W P  + WY  D ++ RER+ND +  PL + L+ E  + WFG  G      LP  + I YVRS++
Sbjct:    9 DPPEGKEWVVFEPMTDEFDGDSLNPEKWYD------HNPTWSGRPPTLFHPDCVAVSNGMLRISAFDSKASARRKLP----SGFTHI------SGFVRSKDRCRFGYFEMRAKLMPSTQVSCFWLTHAGREEWSEIDIVEVAAGTE----------KYGSLLQPNVHYFRGPHYQGTLEHHLKDPSYHDLGVPLKDDFHVYACEWSPTFIRWYF-DGKLVRERHNDMYFQPLEMNLNVEANE-WFG--GLPDDATLPAVYEIDYVRSWR 247          
BLAST of Gcaud6786.t1 vs. uniprot
Match: A0A2W5P7V2_9SPHN (GH16 domain-containing protein n=1 Tax=Sphingomonas taxi TaxID=1549858 RepID=A0A2W5P7V2_9SPHN)

HSP 1 Score: 66.2 bits (160), Expect = 8.090e-9
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
Query:  210 GRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDREIRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQMARR 304
            G   + D   +  G DLS      G+L  PD LVWY +DRE+RR  N D+H PLYL L+  +   W G P        P    I +VR Y++A R
Sbjct:  205 GNQKKGDGLAMQTGADLSAFHT-YGMLVTPDALVWYFDDREVRRVPNRDYHQPLYLLLNLAIGGTWPGAPA--ADTPWPARMRIDWVRGYRLAGR 296          
The following BLAST results are available for this feature:
BLAST of Gcaud6786.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
R7QVA1_CHOCR9.300e-6543.30Glycoside hydrolase family GH16 Endohydrolysis of ... [more]
D5EKY6_CORAD1.110e-2830.27Glycoside hydrolase family 16 n=1 Tax=Coraliomarga... [more]
A0A2V3IL69_9FLOR7.870e-2731.14Beta-porphyranase A n=2 Tax=Gracilariopsis chorda ... [more]
A0A7V2Y2F3_9BACT4.520e-2632.27Glycosyl hydrolase family protein n=1 Tax=Candidat... [more]
R7Q792_CHOCR6.860e-2626.95Glycoside hydrolase family GH16 putative kappa-car... [more]
A0A2V3IVF4_9FLOR2.300e-2527.73Beta-porphyranase A n=1 Tax=Gracilariopsis chorda ... [more]
A0A1G0ZTS2_9BACT6.530e-2426.79GH16 domain-containing protein n=1 Tax=Lentisphaer... [more]
A0A6C2UT86_9BACT1.270e-1928.35Beta-porphyranase B n=2 Tax=Pontiella sulfatirelig... [more]
A0A4P6P8X5_9BACT2.210e-1927.51Glycosyl hydrolase family protein n=1 Tax=Verrucom... [more]
A0A2W5P7V2_9SPHN8.090e-938.95GH16 domain-containing protein n=1 Tax=Sphingomona... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 36..302
e-value: 2.2E-40
score: 140.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 110..259
e-value: 1.2E-6
score: 28.1
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 28..304
score: 13.824569
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 48..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_462_length_24733_cov_4.705949contigNODE_462_length_24733_cov_4.705949:3333..4247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6786.t1Gcaud6786.t1Gracilaria caudata M_176_S67 malemRNANODE_462_length_24733_cov_4.705949 3333..4247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6786.t1 ID=Gcaud6786.t1|Name=Gcaud6786.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=305bp
MPGTCPAPPPACNPTPKDVPPLHYDPSTTHRDTPLPYYLQQEVPRHMKWV
MDWNMSDEFDTNPPENWYGSGKWVRYNPQWAGREPSYFSKNNVYIRDKAL
WLESREERASAEWRAANTAHSSYYNLWNARYSTGFIRTAEKRKYGYFEIA
CKLMDCPVSCAFWFIDQRDREIDVFEYSTSEKVPDVHDGSYVPFKRKFNT
NLIKYSGPRGRNVQSDPFKIDVGRDLSQEKIKVGLLWKPDVLVWYLNDRE
IRRERNNDFHIPLYLQLDSEVFDCWFGEPGQYGHKKLPNAWTIYYVRSYQ
MARR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf