Gcaud6758.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6758.t2
Unique NameGcaud6758.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length141
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud6758.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 5..25
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_126_length_46236_cov_4.348553contigNODE_126_length_46236_cov_4.348553:31873..32357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6758.t2Gcaud6758.t2Gracilaria caudata M_176_S67 malemRNANODE_126_length_46236_cov_4.348553 31873..32357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6758.t2 ID=Gcaud6758.t2|Name=Gcaud6758.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=141bp
MWLTFLRFGLYAFEWFAAIVVWGGTADKLTPISNCYFGKTMNCGAIVFFG
VTGWLILTVMIGGALFYLVKGKYEIPRRIEASMMFGLALGWLLIAIIAAV
GNPSRANEVGRAVLGFSWSNAFAHSMSGGLMTVEARREQM*
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