Gcaud3771.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3771.t1
Unique NameGcaud3771.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length215
Homology
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A2V3J116_9FLOR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J116_9FLOR)

HSP 1 Score: 380 bits (977), Expect = 2.340e-132
Identity = 174/212 (82.08%), Postives = 191/212 (90.09%), Query Frame = 0
Query:    1 MGPFVWFQNLKRPNTSMTATPIAPPSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMPR 212
            MGP  W Q+L RP TSM  TPIAPP+KH VLG P+APPPGGWQAPLQ AMFGLGCFWGAERKFW+K+GV+TTSVGYAGG T+ PTYR+VCSGRTGHAEVVNVVFDSSK SYED++NVFWE+HDPTQKNRQGNDVGTQYRSVIYYYN+EQK+ AE TR HFN LL+EAGR +IATEIQ AP+Y+YAEEYHQQYLHKNP GYCGLGGTGLY PR
Sbjct:   34 MGPIDWLQSLIRPTTSMATTPIAPPTKHTVLGNPVAPPPGGWQAPLQEAMFGLGCFWGAERKFWQKDGVHTTSVGYAGGTTDLPTYREVCSGRTGHAEVVNVVFDSSKTSYEDIINVFWESHDPTQKNRQGNDVGTQYRSVIYYYNDEQKRVAEATRDHFNRLLKEAGRSAIATEIQAAPKYYYAEEYHQQYLHKNPFGYCGLGGTGLYSPR 245          
BLAST of Gcaud3771.t1 vs. uniprot
Match: R7QA15_CHOCR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA15_CHOCR)

HSP 1 Score: 308 bits (788), Expect = 4.950e-104
Identity = 142/193 (73.58%), Postives = 162/193 (83.94%), Query Frame = 0
Query:   21 PIAPPSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMPRK 213
            PIAPP KHVVLGT  A P GGW+ PL+ A+FGLGCFWGAERKFW   GV+TTSVGYAGG    P YR VCSGRTGHAEVVNVVFD SK S+EDML++FW+AHDPT KNRQGNDVG+QYRS I+YYN+ Q++ AE+TR HFN LL+EAGR +  TEI+PA +Y++AEEYHQQYLHKNP GYCGLGGTGLY P K
Sbjct:   20 PIAPPEKHVVLGTSPAQPEGGWKPPLEQAIFGLGCFWGAERKFWTAPGVHTTSVGYAGGMVPNPRYRPVCSGRTGHAEVVNVVFDQSKTSFEDMLDIFWDAHDPTTKNRQGNDVGSQYRSAIFYYNDAQRKLAEQTRDHFNDLLKEAGRNACTTEIKPAGKYYFAEEYHQQYLHKNPTGYCGLGGTGLYRPLK 212          
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A7Y5WV21_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y5WV21_9BACT)

HSP 1 Score: 256 bits (653), Expect = 2.070e-83
Identity = 122/187 (65.24%), Postives = 144/187 (77.01%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMP 211
            P++H VL  P+    G + A LQ AMFGLGCFWGAERKFW+  GVYTT+VGYA G T  PTYR+VCSG TGH+EVV VVFD  ++SYED+L VFWE+HDPTQ  RQGNDVGTQYRS IYYY+E Q+ AAE T   +   L +AG  +I TEI PAP+++YAE+YHQQYL KNP GYCGLGGTG+  P
Sbjct:   25 PARHHVLEAPLQ---GPFPAGLQTAMFGLGCFWGAERKFWQVPGVYTTAVGYAAGLTPNPTYREVCSGMTGHSEVVLVVFDPKRVSYEDLLKVFWESHDPTQGMRQGNDVGTQYRSGIYYYDEAQRAAAERTHDEYQQALSKAGHGTITTEILPAPEFYYAEDYHQQYLSKNPNGYCGLGGTGVTCP 208          
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A838KU52_9ACTN (Peptide-methionine (S)-S-oxide reductase (Fragment) n=2 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A838KU52_9ACTN)

HSP 1 Score: 254 bits (650), Expect = 1.760e-82
Identity = 123/184 (66.85%), Postives = 140/184 (76.09%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGL 208
            P +H VLGTP+ PP   +   L  A+FGLGCFWGAER FWK +GVYTT+VGYAGG T  PTY +VC GRTGH E V VVFD  KI Y D+L VFWE H+PTQ+ RQGNDVGTQYRS IYY ++EQ QAAEETR  + A L E G   IATEI PA Q++YAE+YHQQYLHK P GYCGLGGTG+
Sbjct:   30 PERHAVLGTPLQPP---FPEGLNTAVFGLGCFWGAERVFWKTDGVYTTAVGYAGGFTPNPTYAEVCGGRTGHTEAVLVVFDPEKIFYRDLLAVFWEGHNPTQEMRQGNDVGTQYRSAIYYSDDEQCQAAEETRAAYEAKLREVGYGRIATEIAPAGQFYYAEDYHQQYLHKVPNGYCGLGGTGV 210          
BLAST of Gcaud3771.t1 vs. uniprot
Match: M2VY06_GALSU (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VY06_GALSU)

HSP 1 Score: 253 bits (645), Expect = 3.180e-82
Identity = 120/192 (62.50%), Postives = 145/192 (75.52%), Query Frame = 0
Query:   22 IAPPSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMPRK 213
            I P  KH VLGTP++      +   Q A+FGLGCFWGAERKFW+ +GVY+T+VGYAGG T+ PTY  VC+ RTGHAEVV VV+D  K SYE +L+VFW  HDPTQ NRQGND GTQYRSVI+YY++ QK  AEET+ HF  +L + G  +I TEI PA  +++AE+YHQQYL KNP GYCGLGGTG Y PR+
Sbjct:   26 IIPSEKHYVLGTPLSA--NFEEMGFQYALFGLGCFWGAERKFWQTKGVYSTAVGYAGGRTKNPTYEDVCTDRTGHAEVVRVVYDPKKTSYEQLLDVFWANHDPTQLNRQGNDRGTQYRSVIFYYDDVQKNCAEETKRHFQEVLAKKGYGNIVTEIVPASVFYFAEDYHQQYLAKNPNGYCGLGGTGCYEPRQ 215          
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A2V7URG7_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7URG7_9BACT)

HSP 1 Score: 252 bits (644), Expect = 4.080e-82
Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMP 211
            P++H VLGT + PP   +    + A+FGLGCFWGAERKFW+  GV +T+VGYAGG T  PTYR+VCSG TGHAEVV V+FD  K+ YED+L VFWE+HDPTQ  RQGNDVGTQYRS IY+++EEQ++AAE +R  + A L  AG+  I TEI P P ++YAEEYHQQYL KNP GYCGLGGTG+  P
Sbjct:   27 PARHFVLGTALKPP---FPEGTRTALFGLGCFWGAERKFWQTAGVISTAVGYAGGVTPNPTYREVCSGLTGHAEVVRVLFDPDKVRYEDLLRVFWESHDPTQGMRQGNDVGTQYRSAIYWHDEEQRRAAEASREAYQAALRAAGQGEITTEIAPEPDFYYAEEYHQQYLAKNPGGYCGLGGTGVSCP 210          
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A7W7ZXC1_9ACTN (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A7W7ZXC1_9ACTN)

HSP 1 Score: 252 bits (644), Expect = 4.360e-82
Identity = 115/187 (61.50%), Postives = 146/187 (78.07%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMP 211
            PS+H VL  P+APP   +   L++A FGLGCFWGAERKFW+ EGVYTT+VGY GG TE PTY +VC+G TGH E V VV+D +K+SYE++L VFWE HDPTQ  RQGNDVGTQYRS IYY++ EQ+++A  +R  + A+L+ +G   I TEI PAP++F+AE+YHQQYLH+N  GYCG+GGTG+  P
Sbjct:   29 PSRHAVLDAPLAPP---YPEGLEIADFGLGCFWGAERKFWQTEGVYTTAVGYQGGYTENPTYEEVCTGATGHTEAVRVVYDPAKVSYEELLKVFWENHDPTQGMRQGNDVGTQYRSAIYYHSPEQEKSALASRDAYQAVLKSSGYDEITTEIAPAPEFFFAEDYHQQYLHRNKNGYCGIGGTGVACP 212          
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A2V7TY64_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7TY64_9BACT)

HSP 1 Score: 251 bits (642), Expect = 1.310e-81
Identity = 119/184 (64.67%), Postives = 142/184 (77.17%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGL 208
            P++H VLG P++PP   + A  + A+F LGCFWGAERKFW+  GV +TSVGYAGG T  PTYR+VCSGRTGHAEVV VVFD  K+ YED+L VFWE+HDPTQ  RQGNDVGTQYRS IY+ +EEQ+ AA  +R  +   L  +G   I TEI PAP+++YAEEYHQQYL KNP GYCGLGGTG+
Sbjct:   29 PARHTVLGAPLSPP---FPAGTETALFALGCFWGAERKFWQTPGVVSTSVGYAGGFTPNPTYREVCSGRTGHAEVVRVVFDLRKVRYEDLLRVFWESHDPTQGMRQGNDVGTQYRSAIYWTSEEQRNAAVASRDAYQRALRGSGHGEITTEIAPAPEFYYAEEYHQQYLDKNPGGYCGLGGTGV 209          
BLAST of Gcaud3771.t1 vs. uniprot
Match: UPI001B17876D (Peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Cyanobacteria bacterium SBLK TaxID=2821505 RepID=UPI001B17876D)

HSP 1 Score: 251 bits (640), Expect = 1.830e-81
Identity = 122/187 (65.24%), Postives = 141/187 (75.40%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPPPGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMP 211
            P KH V G P+ PP   +   L+ AMFGLGCFWGAERKFW+ EGVYTT+VGYA G T  PTYR+VCSGRTGH EVV VVFD   ISYE +L +FWE+HDPTQ  RQGNDVGTQYRS IY Y+EEQK+ AE +R  +   L+EAG   I TEI  AP+++YAE+YHQQYL KNP GYCGLGGT +  P
Sbjct:   30 PEKHFVNGNPLKPP---FSEGLETAMFGLGCFWGAERKFWQAEGVYTTAVGYAAGYTPNPTYREVCSGRTGHNEVVYVVFDPQVISYEKILKIFWESHDPTQGMRQGNDVGTQYRSGIYTYSEEQKKLAEASREMYQKALKEAGYGEITTEILDAPEFYYAEDYHQQYLAKNPGGYCGLGGTSVACP 213          
BLAST of Gcaud3771.t1 vs. uniprot
Match: A0A7J9WKV0_9ACTN (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Nitriliruptorales bacterium TaxID=2497630 RepID=A0A7J9WKV0_9ACTN)

HSP 1 Score: 250 bits (639), Expect = 2.270e-81
Identity = 119/188 (63.30%), Postives = 142/188 (75.53%), Query Frame = 0
Query:   25 PSKHVVLGTPIAPP-PGGWQAPLQVAMFGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQKQAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYMP 211
            P +H VLGTP+ PP P G       A+FG+GCFWGAE+ FW+ +GVYTT+VGYAGG T  PTYR+VCSG TGHAEVV V +D  +ISYED+L  FWE HDPTQ  RQGNDVGTQYRS +Y  ++ Q+ AAE +R  + A L +AG   I TEI+PAP ++YAEEYHQQYLHKNP GYCGLGGTG+  P
Sbjct:   26 PERHAVLGTPLKPPFPQGTAQ----AVFGMGCFWGAEKAFWELDGVYTTAVGYAGGPTPNPTYREVCSGDTGHAEVVLVAYDPERISYEDLLKAFWEGHDPTQGMRQGNDVGTQYRSAVYASDDAQQAAAEASRDQYQAKLRKAGYGDITTEIRPAPAFYYAEEYHQQYLHKNPAGYCGLGGTGVACP 209          
The following BLAST results are available for this feature:
BLAST of Gcaud3771.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J116_9FLOR2.340e-13282.08Peptide-methionine (S)-S-oxide reductase n=1 Tax=G... [more]
R7QA15_CHOCR4.950e-10473.58Peptide-methionine (S)-S-oxide reductase n=1 Tax=C... [more]
A0A7Y5WV21_9BACT2.070e-8365.24Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A838KU52_9ACTN1.760e-8266.85Peptide-methionine (S)-S-oxide reductase (Fragment... [more]
M2VY06_GALSU3.180e-8262.50Peptide-methionine (S)-S-oxide reductase n=1 Tax=G... [more]
A0A2V7URG7_9BACT4.080e-8263.64Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A7W7ZXC1_9ACTN4.360e-8261.50Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A2V7TY64_9BACT1.310e-8164.67Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI001B17876D1.830e-8165.24Peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
A0A7J9WKV0_9ACTN2.270e-8163.30Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..166
NoneNo IPR availablePANTHERPTHR42799:SF2MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 41..208
NoneNo IPR availablePANTHERPTHR42799MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 41..208
IPR002569Peptide methionine sulphoxide reductase MsrA domainPFAMPF01625PMSRcoord: 49..201
e-value: 3.6E-66
score: 222.1
IPR002569Peptide methionine sulphoxide reductase MsrA domainTIGRFAMTIGR00401TIGR00401coord: 48..201
e-value: 3.1E-66
score: 220.4
IPR002569Peptide methionine sulphoxide reductase MsrA domainHAMAPMF_01401MsrAcoord: 46..207
score: 38.313053
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10Peptide methionine sulphoxide reductase MsrAcoord: 10..214
e-value: 6.8E-87
score: 292.2
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 21..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_94_length_52825_cov_4.981075contigNODE_94_length_52825_cov_4.981075:36976..37952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3771.t1Gcaud3771.t1Gracilaria caudata M_176_S67 malemRNANODE_94_length_52825_cov_4.981075 36976..37952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3771.t1 ID=Gcaud3771.t1|Name=Gcaud3771.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=215bp
MGPFVWFQNLKRPNTSMTATPIAPPSKHVVLGTPIAPPPGGWQAPLQVAM
FGLGCFWGAERKFWKKEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVV
NVVFDSSKISYEDMLNVFWEAHDPTQKNRQGNDVGTQYRSVIYYYNEEQK
QAAEETRTHFNALLEEAGRKSIATEIQPAPQYFYAEEYHQQYLHKNPMGY
CGLGGTGLYMPRKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002569Met_Sox_Rdtase_MsrA_dom
IPR036509Met_Sox_Rdtase_MsrA_sf