Gcaud373.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud373.t1
Unique NameGcaud373.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length254
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud373.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..253
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1344_length_11249_cov_4.882327contigNODE_1344_length_11249_cov_4.882327:4565..5326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud373.t1Gcaud373.t1Gracilaria caudata M_176_S67 malemRNANODE_1344_length_11249_cov_4.882327 4565..5326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud373.t1 ID=Gcaud373.t1|Name=Gcaud373.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=254bp
MAFSYFFSAAIVAMLLASASASPVTRTGYYKPQVPDPTPTPIPDPTPTPI
PDPTPTPDPDPTPTPVPDPTPDPPRRKPKRTPDPTSNPTPAPAPAPAPAP
APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPIVAIPVIDLGTA
IGGAGGDGGSASVIGAIVTGGFGGDGVSGSGGVLNAGAILGGTGFADLVV
GNGAVGAVDGNGTIVGSVTNTAVAGNGGPGGAASTGGSGGGFGGGGFGGG
KKY*
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