Gcaud3691.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3691.t1
Unique NameGcaud3691.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length161
Homology
BLAST of Gcaud3691.t1 vs. uniprot
Match: A0A2V3IUF0_9FLOR (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 91.3 bits (225), Expect = 2.870e-20
Identity = 56/135 (41.48%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   51 SSVVEPTYYVESDDVQGFLYVELPGVRKRDIVIELHGHHLSISAKRF-----AP------------------TLMSAAEEK---EPKLLVQYDLQLGLSHDTDVSKVKVEEYANGVLAVNIPVARKKNGRKIKID 159
            S  VEP+Y+ ES+    FL VELPGV K  I IE+ GHHL++SA+RF     AP                  T   AA E    +P     Y L+L L++DTD+  VKVE Y NG+L + IPV    + RKI I+
Sbjct:   32 SQTVEPSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSSTSSRKITIE 166          
BLAST of Gcaud3691.t1 vs. uniprot
Match: Q7XZ71_GRIJA (Heat shock protein 16 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ71_GRIJA)

HSP 1 Score: 63.5 bits (153), Expect = 8.110e-10
Identity = 35/115 (30.43%), Postives = 61/115 (53.04%), Query Frame = 0
Query:   56 PTYYVESDDVQGFLYVELPGVRKRDIVIELHGHHLSISAKRFAPTLMSAA------------EEKEPKLLVQYDLQLGLSHDTDVSKVKVEEYANGVLAVNIPVARKKNGRKIKI 158
            P++++ S D +  L VELPGV K DI +E++   L ++  R+     +AA            E  E ++  +Y L++ L  D D+  +  E Y NG+L + IP+  +++ RKI +
Sbjct:   32 PSHFIHSGDKEAMLQVELPGVGKEDIEVEVNRRTLYVNGTRYDQVTSTAAVNNDANEEDSGKEPSEKRVERKYSLEIQLGSDADMDGISFESYNNGILTLKIPIVHQES-RKIDL 145          
BLAST of Gcaud3691.t1 vs. uniprot
Match: R7Q6X4_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X4_CHOCR)

HSP 1 Score: 63.5 bits (153), Expect = 1.230e-9
Identity = 34/128 (26.56%), Postives = 62/128 (48.44%), Query Frame = 0
Query:   49 RVSSVVEPTYYVESDDVQGFLYVELPGVRKRDIVIELHGHHLSISAKRFAPTLMSAAE-----------------EKEPKLLVQYDLQLGLSHDTDVSKVKVEEYANGVLAVNIPVARKKNGRKIKID 159
            R +  VEP+Y  E+D       +E+PGV K ++ +E+H + L++  KRF   L+   +                 +K+P   + Y L+  L    +V  +K +   +G+L + IP+   K  RK++I+
Sbjct:   38 RSTHTVEPSYRYEADSAAAHFEIEIPGVSKDNLSVEVHENKLTVRGKRFCRPLIEKKDNSAVAKDPAQNGDPDQADKDPAPSIVYHLEARLPQRANVDAIKADHIGDGILNMTIPMVDDKGPRKVQIE 165          
BLAST of Gcaud3691.t1 vs. uniprot
Match: R7QS04_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS04_CHOCR)

HSP 1 Score: 60.1 bits (144), Expect = 2.570e-8
Identity = 34/133 (25.56%), Postives = 63/133 (47.37%), Query Frame = 0
Query:   46 ANTRVSSVVEPTYYVESDDVQGFLYVELPGVRKRDIVIELHGHHLSISAKRFAPTLMSAAEE-------------------KEPKLLVQYDLQLGLSHDTDVSKVKVEEYANGVLAVNIPVARKKNGRKIKID 159
            +  R +  VEP+Y  E+D       +E+PGV K ++ +E+H + L++  KRF   L+   ++                   ++P   + Y L+  L    +V  +K +   +G+L + IP+   K  RKI+I+
Sbjct:   35 SGARSTHTVEPSYRYEADGEAAHFEIEIPGVSKDNLSVEVHDNKLTVRGKRFRRPLIEKKDDDPAAAKDPAAQNGDPAHPGEDPVPSIVYLLEARLPQGANVDAIKADHVGDGILNMTIPMVADKGTRKIQIE 167          
The following BLAST results are available for this feature:
BLAST of Gcaud3691.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IUF0_9FLOR2.870e-2041.48SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
Q7XZ71_GRIJA8.110e-1030.43Heat shock protein 16 n=1 Tax=Griffithsia japonica... [more]
R7Q6X4_CHOCR1.230e-926.56Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
R7QS04_CHOCR2.570e-825.56Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 19..160
e-value: 4.7E-14
score: 54.3
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 30..159
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 70..158
e-value: 6.8E-9
score: 35.8
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 49..160
score: 11.190173
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availableCDDcd00298ACD_sHsps_p23-likecoord: 68..146
e-value: 1.89743E-10
score: 52.2063

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_765_length_18448_cov_4.348151contigNODE_765_length_18448_cov_4.348151:10038..10520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3691.t1Gcaud3691.t1Gracilaria caudata M_176_S67 malemRNANODE_765_length_18448_cov_4.348151 10038..10520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3691.t1 ID=Gcaud3691.t1|Name=Gcaud3691.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=161bp
MFPNIAHTIAAPLPFLLGQSHTNSSAHAHFHPFRFGHNRRHPVEGANTRV
SSVVEPTYYVESDDVQGFLYVELPGVRKRDIVIELHGHHLSISAKRFAPT
LMSAAEEKEPKLLVQYDLQLGLSHDTDVSKVKVEEYANGVLAVNIPVARK
KNGRKIKIDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom