Gcaud3627.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3627.t1
Unique NameGcaud3627.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length910
Homology
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A2V3J355_9FLOR (Pumilio domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J355_9FLOR)

HSP 1 Score: 971 bits (2510), Expect = 0.000e+0
Identity = 673/936 (71.90%), Postives = 722/936 (77.14%), Query Frame = 0
Query:    1 MPDHMLPXXXXXAVSSARPPAYFDPHRPKPAERAASPPASDALLGVPDRAASASAPPDLEISSRSLFAFKADYSGIFSDIRLDEDYESFYNDNPERTKLPPPLPLNGLPPRPRPRARPSAPLDIQPLRRDDSNASFDDLIFRESSTMRPSSNPSSLKTDHDILPRSSQSFLPSAPAAHVSNASSXXXXXXDLRHPTPTSVQAPSTPPPSHRAHHTRSLPASAQRPTVSRPTRSAP-PVQQSSPP-LWKLAHLSLDDEHVA---------PTPAVYPSLANAPYEVASPHSPYASYTSPYYQPTHAPGAXXXXXXXXXXXXXXXXHHSSPLPYNTA-PRPQQWSPTHPSRKNPYEYETNMLSSYPS--SHSPDMFNVGSPDDLMLKYGSAQAMQYSA-RVTPYRDS------SSSLFSSSRHVYSSANGASSAVQSSQPQRARAVAAGTQSQ--SAYPYGVYA-PSPQHARHSPYSTSRARMPVDYVNAQAAXXXXXXXXAVYRTNGVHINGHPNTS--LSSLNANGIGVHH-GRNGAAASRRDGRSADGRRSASSTDSYGRSAATANASNASISRSVGVVNERVSNRGTSVGDAPVTAGSSSVKLSSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPKGVAPMVQ 909
            MPDHMLPXXX      ARPPAYFDPHRPKPA+RAASPPASD LLGVPDRA+SASAPPDLEISSRSLFAFKADYSGIFSDIRLDEDYESFYNDNPERTKLPPPLPLNGLPPRPRPRARPS PLDIQPLRRDDS+ASFDDLIFRESSTMRPSSNPS                                         TPTS                        RPT SRP R+   P+   SP  LWKLAHLSLDD+  A         P  AVY  +  +PY++ +PHSPYASYTSPYYQPTHAPGAXXXXXXXXXXXXX   HHSSPLPYN     PQQWSPTHPSRK  Y+ E+ +L SY +  SHS D+F +  PDDL+LKY SAQ M YS  R++PYRDS      S SLF +SR VY S + +S    +                  +AYPYGVYA PSPQ  RHS YS+SRAR+PVDYVNAQAAXXXXXXXX VYRTNGVHING P  +  LSSLN+    +HH   NGA +SRRD RSAD RRS+++ DSY RS+AT+     SISRS+   ++R + R  +V D   TA +SS+KLSSF DVVGRAEELARDQHGCRFLQTKLEEGN LYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPA+ASVSTNMHGTRAVQRMVECLS PEQVDAVCKALTPAAV+LMKDINGNHVIQRCLNRMDP HNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RETKRQLIDELIE+E+TM+RLLHDAYGNYVIQR LQVAEG QLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPKGV  + Q
Sbjct:    1 MPDHMLPXXX---XXXARPPAYFDPHRPKPADRAASPPASDVLLGVPDRASSASAPPDLEISSRSLFAFKADYSGIFSDIRLDEDYESFYNDNPERTKLPPPLPLNGLPPRPRPRARPSPPLDIQPLRRDDSDASFDDLIFRESSTMRPSSNPS-----------------------------------------TPTSTS----------------------RPTPSRPARTVTTPLPDHSPAALWKLAHLSLDDDQTAQAHAPAPTQPPSAVYQPIPTSPYDLPAPHSPYASYTSPYYQPTHAPGAXXXXXXXXXXXXXT--HHSSPLPYNPPHSHPQQWSPTHPSRKLAYDLESPVLPSYAAANSHSSDVFPLDPPDDLVLKYASAQTMPYSTPRLSPYRDSAAAAAASPSLFPTSRQVYVSPDPSSPTAPAXXXXXXXXXXXXXXXXXXNAYPYGVYAAPSPQLPRHSAYSSSRARVPVDYVNAQAAXXXXXXXXXVYRTNGVHINGPPAAAAALSSLNSRAASLHHRNHNGAVSSRRDARSADVRRSSTNPDSYARSSATSXXXXXSISRSITASHDRAAPRTNAVSDTTATASNSSIKLSSFNDVVGRAEELARDQHGCRFLQTKLEEGNALYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAVASVSTNMHGTRAVQRMVECLSTPEQVDAVCKALTPAAVALMKDINGNHVIQRCLNRMDPAHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQRGDRETKRQLIDELIENEDTMKRLLHDAYGNYVIQRALQVAEGAQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPKGVVALPQ 868          
BLAST of Gcaud3627.t1 vs. uniprot
Match: UPI001E1E1B51 (pumilio domain-containing protein C6G9.14-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1B51)

HSP 1 Score: 395 bits (1015), Expect = 1.870e-123
Identity = 290/338 (85.80%), Postives = 307/338 (90.83%), Query Frame = 0
Query:  565 GDAPVTAGSSSVKLSSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPK 902
            G    T   S  KL SF D++GRAEELARDQHGCRFLQTKLEEGN  YIN+IFEECY+KFV+LM DPFGNYLCQKLFE+CNDAQRLALVERCAP+I  VSTNMHGTRAVQRMVECLS PEQV AVC +L PAAVSLMKDINGNHVIQRCL+RM+   NQFVYDAVA NCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRET+R LI+ELI   ETMR+LLHDAYGNYVIQR LQ+AE PQLE+ICEAIRPHL +LKQSPYGKRIQAKI+KRMPK
Sbjct:  221 GGGGATGDLSHGKLVSFNDIIGRAEELARDQHGCRFLQTKLEEGNPSYINAIFEECYEKFVDLMTDPFGNYLCQKLFEYCNDAQRLALVERCAPSIPRVSTNMHGTRAVQRMVECLSTPEQVRAVCNSLAPAAVSLMKDINGNHVIQRCLHRMELASNQFVYDAVANNCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETRRDLIEELIADVETMRQLLHDAYGNYVIQRALQMAESPQLEQICEAIRPHLNALKQSPYGKRIQAKILKRMPK 558          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A7S0G2P4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2P4_9RHOD)

HSP 1 Score: 351 bits (900), Expect = 1.850e-104
Identity = 223/333 (66.97%), Postives = 253/333 (75.98%), Query Frame = 0
Query:  570 TAGSSSVKLSSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPK 902
            T+ SS++KL+ F++ VGR +ELARDQHGCR+LQTKLEEGN    + IFEEC+D+FV+LM+DPFGNYLCQKLFE C+D+QRL L+E CA ++A VSTNMHGTRAVQRMVEC S  EQ+   C AL P+AV LMKDINGNHVIQRCL+RMD  HNQFVYDAVAANC +LATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         ET+  LI+ELI   + + RLLHDAYGNYVIQR LQ+A  PQLE +CEAIRPHLPSLK SPYGKRIQ+KI+KR PK
Sbjct:  438 TSASSTLKLNHFSEAVGRVKELARDQHGCRYLQTKLEEGNKQCTSIIFEECFDEFVDLMVDPFGNYLCQKLFEHCDDSQRLMLIEFCAHSLARVSTNMHGTRAVQRMVECFSTEEQITTACSALAPSAVLLMKDINGNHVIQRCLHRMDSKHNQFVYDAVAANCLDLATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGDIGYTMEIIKPLQGHVGELSTQKFSSNVVEKCLQQGNAETRSILIEELISDSDVIGRLLHDAYGNYVIQRSLQLARSPQLEALCEAIRPHLPSLKSSPYGKRIQSKILKRFPK 770          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A5J4YUI7_PORPP (Pumilio domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUI7_PORPP)

HSP 1 Score: 335 bits (859), Expect = 1.660e-95
Identity = 259/344 (75.29%), Postives = 288/344 (83.72%), Query Frame = 0
Query:  561 GTSVGDAPVTAGSSSVKLSSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPKGV 904
            G+ VG AP        KL+SF++V+GR  ELARDQHGCRFLQTKLEEG+   ++S+F+E     V+LM DPFGNYLCQKLFEFC+D QRLALV +C PA+A VS NMHGTRAVQRMVECLS PEQV AV +AL P+ V LMKD+NGNHV+QRCL RM   +NQFVYDAVA NCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + +  LI ELI S++ + RLL DAYGNYV+QR L VA  PQLE +CEAI PHLP+L+ SPYGKRIQ KIMKRMPK +
Sbjct:  642 GSGVGIAP--------KLTSFSEVIGRVVELARDQHGCRFLQTKLEEGSAYIVDSVFDEXXXXXVDLMTDPFGNYLCQKLFEFCSDTQRLALVRKCGPALARVSANMHGTRAVQRMVECLSAPEQVSAVIRALAPSTVFLMKDVNGNHVVQRCLQRMSSQNNQFVYDAVARNCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPDIRDHLISELIVSQDVIGRLLFDAYGNYVVQRALSVAASPQLEVLCEAIYPHLPALRSSPYGKRIQTKIMKRMPKNI 977          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A1X6PHQ1_PORUM (PUM-HD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PHQ1_PORUM)

HSP 1 Score: 319 bits (817), Expect = 2.750e-90
Identity = 398/951 (41.85%), Postives = 478/951 (50.26%), Query Frame = 0
Query:   46 VPDRAASASAPPDLEISSRSLFAFKADYSGIFSDIRLDEDYESFYNDNPERTKLPPPLPLNGLPPRPRPRARPSAPL---------------DIQPLRRDDSNASFDDLIFRESSTMRPSSNPS----SLKTDHDILPRSSQSFLPSAPAAHVSNASSXXXXXXDLRHPTPTSVQA---PSTPPPSHRAHHTR--------SLPASAQRPTVSRPTRSAPPVQQSSPPLWKLAHLSLDDEHVAPTPAV-----YPSLANAP-----YEVASPHSP-YASYTSPYYQPTHAP------GAXXXXXXXXXXXXXXXXHHSSPL-----------------------------PYNTAPRPQQWSPTHPSRKNPYEYETNMLSSYPSSHSPDMFNVGSPDDLMLKYGSAQAMQYSARVTPYRDSSSSLFSSSRHVYSSANGASSAVQSSQPQRARAVAAGTQSQSAYPYGVYAPSPQHARHSPYSTSRARMPVDYVNAQAAXXXXXXXXAVYRTNGVHINGHPNTSLSSLNANGIGVHHGRNGAAASRRDGRSADGRRSASSTDSYGRSAATANASN------------------ASISRSVGVVNERVSNRGTSVGDAPVTAGSSSVKLSSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPK 902
            VPDRA +ASAPPDLE+SSRSL ++ ADY+   SDIR D  YE+FYN+ PE+ KLPPPL    +P   R       PL                   LRR DS+AS +DLIFRES  MRP S+ +    +L  +  +   +S S +PS     + + +       D  H TP    A   P  P P                + P+   RP+  R  RSAP     SP      H       + P P +     Y S A  P          P+ P Y++  +      H P      G                    +P+                             PY   PRP Q  P H S   PY      L + P       +    P  L+  YGS    +Y      Y D                 G         P RA               GV   +P           RA +P         XXXXXXXX    T    +       +SS    G+GV  G   A     D  +A     +SS  S  RS   A A                    AS   S+ V +  +      +G     A +S     SF++VVGR +ELARDQHGCR+LQT LEE +   IN +F+E Y  FV+LM DPF NYLCQK+FE+C++ QRLAL+ R APA+ SVSTNMHGTRAVQRMVECLS PEQV A+   L PAAVSLMKD+NGNHVIQRCL+RMD   NQFVYDAV  N  ELATHR    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R+ +R +I EL+   +T +RL+ D++GNY +QR L VAE PQLE++CEAIRPHLP+LK SPYGKRI +KI+KR PK
Sbjct:  143 VPDRAETASAPPDLEVSSRSLSSYAADYNAALSDIRCDVHYEAFYNNYPEKQKLPPPLEPVSVPVGGRMAPSQGTPLGQASSLAAGSGXXXXSSSGLRRIDSDASVEDLIFRESRKMRPRSSTNLQSLALLREDSVTSLASLSRVPSD--VGLDDLAYRASPFMDGSHYTPPLAPARLLPPRPQPXXXXXXXXXXXGAANGTSPSFTHRPSPLR--RSAPNGMAGSPSGGTPHHGRPAPPPMQPPPYLNSNGYYASGAGPPSMXXXXXXPDPYDPSYSTVRAMAMMSLHQPPGGSAAGPPGVGGPTPPSLVNGMVDRGAPMRSXXXXXXXXXXTYGMPPAAQMVPSYGYSPYGGVPRPVQ-QPVH-SPPRPY------LGTSPGGAERPPYG---PSPLLSPYGSPAPPEYGY---DYGDGERGTGVPGGPAMGVGGG---------PGRATGR-----------MGVGETAPPTYGGRGERRRRAPLPXXXXXXXXXXXXXXXXXVPLGTPAXXMGPVGIGVVSS----GVGVGGGGVTAGVHVGDYDAAHSLSMSSSFTSPPRSPPMATAGGVXXXXXXXXXXXXXXXXXASYGGSMAVPSTGLVGNTLGLG----AAATSPPLFMSFSEVVGRIDELARDQHGCRYLQTALEEADSSRINVVFDEVYGPFVDLMTDPFANYLCQKVFEYCSNTQRLALLGRTAPALPSVSTNMHGTRAVQRMVECLSTPEQVTAMVSVLAPAAVSLMKDLNGNHVIQRCLHRMDAAANQFVYDAVVTNAIELATHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLQLASRDLRRLVIAELMADADTTKRLIFDSFGNYPVQRALLVAESPQLEQLCEAIRPHLPALKASPYGKRIHSKIVKRFPK 1047          
BLAST of Gcaud3627.t1 vs. uniprot
Match: M2W0G8_GALSU (Serine rich Pumilio family RNA binding domain protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W0G8_GALSU)

HSP 1 Score: 302 bits (774), Expect = 9.340e-86
Identity = 199/333 (59.76%), Postives = 236/333 (70.87%), Query Frame = 0
Query:  569 VTAGSSSVKLSSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMP 901
            +T   S+ K+ S  ++VGR  ELA+DQHGCRFLQ KLEEGN  YI  I  EC+D   ELM+DPFGNYLCQKLFE CN  QRL++++     +A VS NMHGTR VQR++EC+   +Q+  VC ALTP A  LMKD+NGNHVIQRCL ++ PTHNQF++DAV ++C ELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       ET++ LI EL+   E + RLLHDAYGNYV+QR LQ+A+ PQLE+ CE IRPHL SLK +PYGKRI +KI++R P
Sbjct:  512 LTGNVSTSKVWSMEEIVGRIFELAKDQHGCRFLQMKLEEGNPAYIAMILAECFDGLPELMVDPFGNYLCQKLFECCNFQQRLSILQNTCSVLAQVSMNMHGTRVVQRIIECMEGEDQISTVCTALTPFASQLMKDVNGNHVIQRCLQKVAPTHNQFIFDAVVSHCVELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNRFYIAKIIAQLAGHLYELSVQKFSSNVVEKCLQQVDPETRKHLIYELMSDRELLGRLLHDAYGNYVVQRALQLAQSPQLEQFCEIIRPHLSSLKSTPYGKRIYSKIVRRFP 844          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A7S1XCD2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCD2_9RHOD)

HSP 1 Score: 279 bits (713), Expect = 8.190e-83
Identity = 145/316 (45.89%), Postives = 182/316 (57.59%), Query Frame = 0
Query:  587 RAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRMPK 902
            R   LA+DQ+GCR+LQ KLE+G    ++ IF ECY+ FVELM +PF NYL QKLFE C+D+QRL LV+RC+P++ SV  NMHGTRAVQRM++ LS  EQ+  VC ++ P++VSLMKDINGNH IQRCL R+ P  NQF+YDA   +C EL+ HRHGCC                                                                                   E + +LI ELI   + +RRLL D++GNYVIQR LQ+AE PQ E++C+ IRPHLP LK SPYGKRIQ+KI+KR PK
Sbjct:    1 RIVSLAKDQYGCRYLQCKLEDGEQAVVDLIFHECYETFVELMTEPFANYLVQKLFEHCDDSQRLLLVKRCSPSLPSVCVNMHGTRAVQRMIDFLSTSEQISHVCASIAPSSVSLMKDINGNHCIQRCLQRIKPPFNQFIYDAALESCCELSCHRHGCCVIQRCLDFASPVQRKTLVERIILHSLVLVQNPFGNYVVQYVLDLSELEYTSAIVHQLEGNLVELSVQKFSSNVVEKCFQKAEPELRCKLIAELISRPDMIRRLLLDSFGNYVIQRALQLAETPQFEQLCDVIRPHLPCLKASPYGKRIQSKILKRFPK 316          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A167NAZ6_PHYB8 (PUM-HD domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167NAZ6_PHYB8)

HSP 1 Score: 232 bits (591), Expect = 2.720e-65
Identity = 130/318 (40.88%), Postives = 169/318 (53.14%), Query Frame = 0
Query:  579 SSFTDVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKI 896
            +S  D  G   E+ +DQ+GCRFLQ KLEE N   +  IF+E +  FVELM DPFGNYLCQKL E C++ QR  +V   AP + S+S NMHGTRAVQ+++E L  PEQ+ AV  AL P  V+L+KD+NGNHVIQ+CL+R+   +NQF+YDAV+A+C ++ATHRHGCC                                                                                   ET+R LI EL   +  M +LL D++GNYVIQ  L  A+  Q  ++ E IRP LPS++ +PYGKRI  KI
Sbjct:   15 ASLEDFQGSLYEICKDQNGCRFLQKKLEEPNGQNLEMIFDEIHSHFVELMTDPFGNYLCQKLLERCSNTQRGIIVTIIAPELLSISLNMHGTRAVQKLIEFLVTPEQIQAVTAALAPNVVALIKDLNGNHVIQKCLHRLSAENNQFIYDAVSASCIKVATHRHGCCVLQRCIDHAAPYQKEQLVSVITFLALPLVQDPFGNYVVQYVLDLGDVQFSDGLVRRFLDHVCDLSVQKFSSNVIEKCIRVSEPETRRLLIAELA-IKTNMDQLLRDSFGNYVIQTCLDYADPDQRVQLVECIRPSLPSIRSTPYGKRIYGKI 331          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A316VDD5_9BASI (ARM repeat-containing protein (Fragment) n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VDD5_9BASI)

HSP 1 Score: 230 bits (587), Expect = 1.550e-64
Identity = 197/314 (62.74%), Postives = 243/314 (77.39%), Query Frame = 0
Query:  583 DVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKI 896
            ++ G    L +DQHGCR+LQ KLEEGN  Y + IF E ++ F ELM DPFGNYLCQK+ EFC D QR  +VE  AP + ++S NMHGTRAVQ+ ++ LS P Q+ ++  AL    V L+KD+NGNHVIQ+CLNR+  + NQF+YDAVA +C E+ATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ++QLI+EL+ + + + +LL D++ NYV+Q  L  A+  Q  ++ E I+P LP ++ +PYGKRIQ+K+
Sbjct:   35 EMQGEIFALCKDQHGCRYLQKKLEEGNPSYRDMIFTETFNHFAELMTDPFGNYLCQKMLEFCTDEQRNLIVESVAPDLVNISLNMHGTRAVQKTIDFLSTPRQIHSIIMALGMNVVPLIKDLNGNHVIQKCLNRLGSSDNQFIYDAVATHCIEVATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIRVSEPGVRKQLIEELL-NRQRLEKLLRDSFANYVVQTSLDYADPHQRMQLVECIKPILPMIRNTPYGKRIQSKL 347          
BLAST of Gcaud3627.t1 vs. uniprot
Match: A0A1X2HQT5_SYNRA (Armadillo-type protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HQT5_SYNRA)

HSP 1 Score: 226 bits (576), Expect = 3.090e-62
Identity = 164/316 (51.90%), Postives = 206/316 (65.19%), Query Frame = 0
Query:  583 DVVGRAEELARDQHGCRFLQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRLALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSLMKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKRQLIDELIESEETMRRLLHDAYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMK 898
            D +G+  +L +DQ+GCRFLQ KLEE N   +   FEE    F ELM +PFGNYLCQKL E C+DAQR  LVE  AP +  +S NMHGTRAVQ+ +E LS P+Q+ AV  AL P  V+L+KD+NGNHVIQ+CL+R+   H QF+YDAV+ NC ++ATHRH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                            ET+R L+ EL+ +E  + +LL D++ NYVIQ  L+ A+  Q  ++ E+IRP LPS++ +PYGKRI +KI +
Sbjct:   24 DFIGKIYDLCKDQNGCRFLQKKLEEPNRQNLQLCFEEVQPNFAELMTEPFGNYLCQKLIEHCDDAQRDILVETVAPDLLKISLNMHGTRAVQKFIEFLSTPQQIHAVIAALNPNVVALIKDLNGNHVIQKCLHRLSAEHKQFIYDAVSENCIQVATHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVLDLGDITYTDTLVRCFLEHVCDLSVQKFSSNVIEKCIRVAEPETRRLLVAELM-NEANIEKLLRDSFANYVIQTCLEYADQDQRVQLVESIRPLLPSIRSTPYGKRIHSKIQR 338          
The following BLAST results are available for this feature:
BLAST of Gcaud3627.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J355_9FLOR0.000e+071.90Pumilio domain-containing protein n=1 Tax=Gracilar... [more]
UPI001E1E1B511.870e-12385.80pumilio domain-containing protein C6G9.14-like n=1... [more]
A0A7S0G2P4_9RHOD1.850e-10466.97Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A5J4YUI7_PORPP1.660e-9575.29Pumilio domain-containing protein n=1 Tax=Porphyri... [more]
A0A1X6PHQ1_PORUM2.750e-9041.85PUM-HD domain-containing protein n=1 Tax=Porphyra ... [more]
M2W0G8_GALSU9.340e-8659.76Serine rich Pumilio family RNA binding domain prot... [more]
A0A7S1XCD2_9RHOD8.190e-8345.89Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A167NAZ6_PHYB82.720e-6540.88PUM-HD domain-containing protein (Fragment) n=1 Ta... [more]
A0A316VDD5_9BASI1.550e-6462.74ARM repeat-containing protein (Fragment) n=1 Tax=M... [more]
A0A1X2HQT5_SYNRA3.090e-6251.90Armadillo-type protein n=1 Tax=Syncephalastrum rac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 830..850
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..248
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 329..894
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 329..894
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 583..618
e-value: 4.9E-4
score: 29.4
coord: 839..874
e-value: 0.072
score: 22.2
coord: 619..654
e-value: 1.4E-6
score: 37.8
coord: 655..691
e-value: 0.98
score: 18.5
coord: 728..763
e-value: 1.2E-5
score: 34.8
coord: 692..727
e-value: 3.2E-5
score: 33.3
coord: 764..799
e-value: 3.1E-4
score: 30.1
coord: 800..835
e-value: 0.0066
score: 25.7
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 850..876
e-value: 0.0069
score: 16.1
coord: 661..693
e-value: 1.5E-5
score: 24.6
coord: 770..799
e-value: 0.05
score: 13.3
coord: 590..619
e-value: 1.2E-6
score: 28.1
coord: 804..838
e-value: 5.0E-6
score: 26.1
coord: 698..729
e-value: 4.5E-6
score: 26.3
coord: 624..654
e-value: 1.0E-8
score: 34.7
coord: 732..765
e-value: 6.7E-13
score: 48.0
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 583..618
score: 8.220613
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 728..763
score: 9.573834
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 692..727
score: 8.66391
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 836..874
score: 9.387183
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 619..654
score: 9.760486
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 764..799
score: 9.573834
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 800..835
score: 9.620497
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 571..904
e-value: 1.6E-127
score: 427.2
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 559..900
score: 105.027199
IPR033712Pumilio, RNA binding domainCDDcd07920Pumiliocoord: 585..896
e-value: 4.26421E-141
score: 420.46
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 581..895

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_938_length_15940_cov_4.442425contigNODE_938_length_15940_cov_4.442425:21..2750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3627.t1Gcaud3627.t1Gracilaria caudata M_176_S67 malemRNANODE_938_length_15940_cov_4.442425 21..2750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3627.t1 ID=Gcaud3627.t1|Name=Gcaud3627.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=910bp
MPDHMLPPPPPSAVSSARPPAYFDPHRPKPAERAASPPASDALLGVPDRA
ASASAPPDLEISSRSLFAFKADYSGIFSDIRLDEDYESFYNDNPERTKLP
PPLPLNGLPPRPRPRARPSAPLDIQPLRRDDSNASFDDLIFRESSTMRPS
SNPSSLKTDHDILPRSSQSFLPSAPAAHVSNASSPPPPPPDLRHPTPTSV
QAPSTPPPSHRAHHTRSLPASAQRPTVSRPTRSAPPVQQSSPPLWKLAHL
SLDDEHVAPTPAVYPSLANAPYEVASPHSPYASYTSPYYQPTHAPGAAAA
AAAAAAAAAVAAAHHSSPLPYNTAPRPQQWSPTHPSRKNPYEYETNMLSS
YPSSHSPDMFNVGSPDDLMLKYGSAQAMQYSARVTPYRDSSSSLFSSSRH
VYSSANGASSAVQSSQPQRARAVAAGTQSQSAYPYGVYAPSPQHARHSPY
STSRARMPVDYVNAQAAAAAAAAAAAVYRTNGVHINGHPNTSLSSLNANG
IGVHHGRNGAAASRRDGRSADGRRSASSTDSYGRSAATANASNASISRSV
GVVNERVSNRGTSVGDAPVTAGSSSVKLSSFTDVVGRAEELARDQHGCRF
LQTKLEEGNVLYINSIFEECYDKFVELMMDPFGNYLCQKLFEFCNDAQRL
ALVERCAPAIASVSTNMHGTRAVQRMVECLSRPEQVDAVCKALTPAAVSL
MKDINGNHVIQRCLNRMDPTHNQFVYDAVAANCFELATHRHGCCVMQRCM
DYASPAQRNQLTQQINANALPLVQNAFGNYVVQYVLELNDPVYTSEIIRR
LRGHVAELSMQKFSSNVVEKGLQLGDRETKRQLIDELIESEETMRRLLHD
AYGNYVIQRGLQVAEGPQLERICEAIRPHLPSLKQSPYGKRIQAKIMKRM
PKGVAPMVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR033712Pumilio_RNA-bd
IPR016024ARM-type_fold