Gcaud3596.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3596.t1
Unique NameGcaud3596.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length328
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud3596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 3..300
e-value: 1.3E-5
score: 25.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 28..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_920_length_16131_cov_4.457419contigNODE_920_length_16131_cov_4.457419:1204..2187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3596.t1Gcaud3596.t1Gracilaria caudata M_176_S67 malemRNANODE_920_length_16131_cov_4.457419 1204..2187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3596.t1 ID=Gcaud3596.t1|Name=Gcaud3596.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=328bp
MTSKLSLIFSGQVPASEAFFGVPETFKELTLICNSLDPYVLSTFLHLEQI
EWTSQPFNFSDLIYLKPRVGSKLRSLSFQDIEPLFPKEISLPRYKHLFHL
IKRLHVKNEIPLTRAGVDFLSRVAPSLEVLQVSIPTSLVPLLSTYIEELK
HLKVLDLDILASDLPEVRDGFLKHLYETCNNIWHGLLGCPSSLEHLRIPK
GCIGRQMFFEVLKKFKMSLQAFQVPLLDDGLEHEGIFFEACWKDIKDALG
RVPIVCPRLKQLCVLKLSGLEGIREGAGEEEGNECDKEMFRNLDQLDVAL
TGFDKDSFFYGLKAFQTPSSVLRRDNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf