Gcaud3574.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3574.t1
Unique NameGcaud3574.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length519
Homology
BLAST of Gcaud3574.t1 vs. uniprot
Match: A0A2V3J169_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J169_9FLOR)

HSP 1 Score: 781 bits (2017), Expect = 3.590e-281
Identity = 405/520 (77.88%), Postives = 453/520 (87.12%), Query Frame = 0
Query:    1 MCNESPPLGPTPPPATS-GVPVVAAEPMPGS--KCHLCHRDAEKPSQPEQQPTADAKSLPPAHAHHRSISVDEKGYFTVYDPESFSEEAHGFAGRIVKRMGIFAYLLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTSLAPLIAVFLAEIAIMSPVLLTHGIYDWIGIVALTVCYLALFVALRVTYHTHHQLVHAFFRRFMFLLILFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLGDLTTILAFPQVSRPAVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTYVLNGIKGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKEFTPLATFTRTQYRHSMIYAAANLVFIAAVAALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAIILSHYCIFSSFQGCVFV 517
            M N S  + PT PP+T+  VPVV AE    S   CHLC       S+   Q     +       H ++ SVD+KGY  VYDP+ F+EE HG AGRIVKRM +FAY++FFLVPLAFVA+VFAIVPLG PT+P ISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTS+ PL+ VF+AEI +M+PVLLTHGIYDW+GIVALTVCYLALF ++R TY   H+LVH+FFRRFMFLLIL+IPILS FVIAYRETSS  LQSF+SFMFAF+TFVYRRIMLSRLDPFPLEISQLL+GFWVQNLGD+TTILAFPQV+RP+V+AAIF SN+LSNVAFLVFVS+PWIYKIRPTLKTYV+N +KGNFPIPPIPEADESFDP+NRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNK+FT LA F+  QYR+SMIYAA+N+VFIAA+A +GY YLHKRHHQTFHEIREIH+HDLVHHTWVGL+TAIITHNLILTIAIILSHYCIFSSFQGC+FV
Sbjct:    1 MSNNST-IRPTAPPSTAPDVPVVEAEGTLRSPTSCHLCEHSTHGHSRAPVQTPDPEEPTTKRPVHKKNYSVDDKGYPLVYDPDDFNEEPHGLAGRIVKRMRVFAYIIFFLVPLAFVAVVFAIVPLGKPTIPTISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTSVIPLVTVFVAEIGVMAPVLLTHGIYDWLGIVALTVCYLALFSSMRFTYGREHELVHSFFRRFMFLLILYIPILSGFVIAYRETSSTVLQSFLSFMFAFLTFVYRRIMLSRLDPFPLEISQLLAGFWVQNLGDVTTILAFPQVARPSVFAAIFVSNSLSNVAFLVFVSNPWIYKIRPTLKTYVINAMKGNFPIPPIPEADESFDPINRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKDFTALARFSADQYRNSMIYAASNMVFIAAIAVVGYVYLHKRHHQTFHEIREIHRHDLVHHTWVGLITAIITHNLILTIAIILSHYCIFSSFQGCLFV 519          
BLAST of Gcaud3574.t1 vs. uniprot
Match: R7Q7C2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7C2_CHOCR)

HSP 1 Score: 568 bits (1463), Expect = 2.400e-198
Identity = 282/417 (67.63%), Postives = 348/417 (83.45%), Query Frame = 0
Query:   97 MGIFAYLLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTSLAPLIAVFLAEIAIMSPVLLTHGIYDWIGIVALTVCYLALFVALRVTYHTHHQLVHAFFRRFMFLLILFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLGDLTTILAFPQVSRPAVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTYVLNGIKGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKEFTPLATFTRTQYRHSMIYAAANLVFIAAVAALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAIILSHYCIFSSFQG 513
            MG FAY+ FF++PLA+VAI FAIVPLG+P + +IS+QWVFIF+SN AV +AISYLYNA FL+ AR E PFRTSL PL AVF+AEI +++P+LLT+G+++W+GI AL+VCY+ L+ ++ + YH    +VH+FF+RFM LLIL+IP+L  +VIAYRE +S A QS +SF  AFITF+YRR+MLS+LDPFPLE SQL++GFWVQNL D T +LAFPQV  P+VYAA+F S +L NVAFL FVSD WIY +RPT+K  VLNGIK NFP+PP+P+ DE+FD VNRGHDAN GGYRRRQFRFFFFRLLSQA++M MYL ISPMLR+GLNKE+TPL+     +YR+SMI++A NLVFIA V   GY +LH+ HH TFHEIREIH HD++HHT VG+VTAIITHN+I+TIAIILS YCIFSSF G
Sbjct:    1 MGPFAYVFFFVIPLAYVAIFFAIVPLGDPRLSDISDQWVFIFISNGAVVLAISYLYNAAFLSMARCETPFRTSLIPLAAVFVAEIVVLTPILLTYGVFNWLGIAALSVCYVTLYGSMLLAYHDIRPMVHSFFKRFMLLLILYIPLLVGYVIAYREITSSAGQSALSFCLAFITFIYRRVMLSQLDPFPLEFSQLMAGFWVQNLSDCTAVLAFPQVRSPSVYAALFLSTSLQNVAFLGFVSDMWIYTLRPTIKNTVLNGIKCNFPLPPVPKPDETFDRVNRGHDANVGGYRRRQFRFFFFRLLSQAVAMVMYLGISPMLRYGLNKEYTPLSLIPHEEYRNSMIFSAGNLVFIALVGIFGYVFLHRSHHATFHEIREIHMHDILHHTMVGMVTAIITHNMIVTIAIILSQYCIFSSFDG 417          
BLAST of Gcaud3574.t1 vs. uniprot
Match: A0A1X6NTD4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTD4_PORUM)

HSP 1 Score: 409 bits (1050), Expect = 6.570e-134
Identity = 224/496 (45.16%), Postives = 316/496 (63.71%), Query Frame = 0
Query:   40 EKPSQPEQQPTADAKS-LPPAH---AHHRSISV--------------DEKGYFTVYDPESFSEEAHGFAGRIVKRMGIFAYLLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTSLAPLIAVFLAEIAIMSPVLLTHGIYDWIGIVALTVCYLALFVALRVTYHTHHQLVHAFFRRFMFLLILFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLGDLTTILAFPQVSRPAVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTYVLNGIKGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKEFTPLA-TFTRTQYRHSMIYAAANLVFIAAVAALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAIILSHYCIFSSFQGCVF 516
            E P++P  + T  A   + P H   AHHR  S               DE+    + DP    E   G AG    ++G++AY +F ++PL FVA+VFAIVPLG+P   +I  Q VF+FV+N AV  AI YLY   +   +   RPFR S+ P++ V + ++AIM P+ LT G+ D +GI+A+ +C + ++  L +T     + V  FF  F   L+  I  L+ ++IAYR  +S  +Q  + F     TF++RRIMLS LD +PLE++ LLSG W+Q+L D+    +FPQVS P V+AA++ + +  NVA L+FVSD WI+K+RP +KTYV+N  KGNFPIPPIPE D +F+P +RGH AN G YRRRQFRF+ ++++SQA++   YL +SP+LRFGLNKE  P   T     +R+SM+YA  NL+FI  V  LGYF ++K HH  FHE++ IH H+   +T+VG V AI+THN+IL + ++L HYC+FSSF  C F
Sbjct:   65 EAPARPADRATGRAPHPVEPTHHIRAHHRRASSVAEATAEALANEARDERNEKLIVDPVHL-ETPQGHAGEAAAQLGLWAYPIFLIIPLLFVAVVFAIVPLGDPFDASIGGQAVFVFVTNLAVTAAIGYLYATIYSGMSGSSRPFRVSVLPMVVVIVIQLAIMLPIYLTRGVRDLLGILAVGLCVVGVYATLALTRPEERKKVWHFFLHFQVPLLFHITALTLYMIAYRSANS-VVQGILVFALNLFTFIFRRIMLSLLDAYPLELTMLLSGLWIQSLADVVQAFSFPQVSNPKVFAAVWVAQSFGNVALLLFVSDVWIFKLRPVIKTYVVNTFKGNFPIPPIPEPDYTFNPEDRGHSANVGSYRRRQFRFWIWKIVSQAVAQLAYLVLSPILRFGLNKERFPFGPTLPIDGWRNSMVYAGVNLIFIGLVTLLGYFVMYKWHHTAFHEVKTIHIHEFHSYTYVGFVVAILTHNIILALGMLLQHYCVFSSFNDCRF 558          
BLAST of Gcaud3574.t1 vs. uniprot
Match: A0A7S1TE76_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE76_9RHOD)

HSP 1 Score: 360 bits (923), Expect = 2.600e-116
Identity = 202/433 (46.65%), Postives = 278/433 (64.20%), Query Frame = 0
Query:   80 ESFSEEAHGFAGRIVKRMGIFAYLLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTSLAPLIAVFLAEIAIMSPVLLTHGIYDWIGIVALTVCYLALFVALRVTYHTHHQLVHAFFRRFMFLLILFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLGDLTTILAFPQVSRPAVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTYVLNGIKGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKEFTPLATFTRTQYRHSMIYAAANLVFIAAVAALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAIILSHYCIFSSFQ 512
            E   EEAHG AGRI+ R G   YL+F LVPLA+V I  A +PLG+P   N   Q VF+ V+N  +  AISYLY +T+       RPF  SL   I V+LAE+ +M+P+ +T G ++    V+  V  +  +  L +      + V + F RF   LILF    +++ IAYRE S    Q  +    AF+TF+ RR+ LS  DP+PL+I+ L++G W QN+ DL   LAFPQV+ P V+AAI+ +N+  N++ L F++  WI+ +RP LK++VL   K +F  P  P  D S+D  +RGH  N GGYRRRQFRFFF+RL+SQA +  +YL ISPMLRFGLN E  PL+     +YR+SMIYAA+ L+F+  V  +GY YL  R+  TF +++ IH H+ +HHT+VG V +I+THNLIL IAI+ SHYC FS+F+
Sbjct:   20 EPTQEEAHGLAGRILHRTGPAGYLVFLLVPLAYVGIFLATIPLGDPEAKNFRSQAVFVLVTNPVIMSAISYLYASTYYGFHERVRPFHQSLGAPITVYLAEVVVMTPIYVTLGAFELAIFVSYVVAVIGTYFFLILAGEPQPK-VRSMFLRFQVPLILFTAAAASYTIAYREASPAG-QGGLVIALAFLTFIVRRVSLSLYDPYPLDIATLVAGLWFQNISDLFQTLAFPQVASPKVFAAIWVANSFGNISLLGFLTKAWIFTLRPWLKSHVLGWFKCDFSTPEPPVFDFSYDFNDRGHGPNVGGYRRRQFRFFFWRLISQASAQILYLCISPMLRFGLNDEHFPLSGIGVEEYRNSMIYAASYLIFVLLVGIMGYRYLKTRYPVTFEDMKSIHGHEFLHHTFVGFVVSILTHNLILAIAILASHYCTFSAFR 450          
BLAST of Gcaud3574.t1 vs. uniprot
Match: L8H9Q6_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9Q6_ACACA)

HSP 1 Score: 172 bits (435), Expect = 1.980e-43
Identity = 131/448 (29.24%), Postives = 228/448 (50.89%), Query Frame = 0
Query:   94 VKRMGIFAYLLFFLVPLAFVAIVFAIVPLGNP-TVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRT---SLAPLIAVFLAEIAIMSPVLLTHGIYDWIGIVALTVCYLALFVALRVTYHT-HHQLVHAFFRRFM---FLLILFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLGDLTTILAFPQVSRPAVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTY------------VLNGIKGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRF-GLNKEF-----TPLATFTRTQYRH-----------SMIYAAANLVFIAAVAALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAIILSH 504
            + ++G   +++  ++P AF+ ++  ++PLG P  V +    W FIF  N  +   ++YL    +      ERPF      L  + AV++ E+ ++  ++L    + +IG+V+L + +L  F    V      ++ +   +R++M    LL + + IL+ +VI +RE  +  LQS ++F  + + F+ R+IMLS  DPFP+E++ L+SGFW+ N+ D+   LAFP V  P  +  I+  N + +VA L+F++  W ++ R  +K              VL G     P P      E  +P  RGH  N  GYRRRQ RF+F+R+ S+ +++  Y ++S +LR+   N ++      P    T ++ +H           S+IYA+ N V       +GY  L     + F ++  I +    +HT++G + AII HN +L I  +  H
Sbjct:  122 LTKIGALFWVMVLVIPNAFILLLL-LIPLGEPDAVFDRHGAWPFIFFVNPLIMALVAYLQLTPYWGAHGDERPFTLFPEKLPIMAAVYVLELVVILALVLLFDFFSFIGLVSLGISFLVAFFGTWVWQRLKRNEALLVLYRKYMKIVTLLYIHLVILAIYVILFRELPAN-LQSVLTFALSIVVFINRKIMLSFTDPFPIELAMLISGFWINNVSDMFQTLAFPNVKDPITFLYIWLINFVGDVANLIFLTSIW-FRFRVWIKAVQCFIVIVFIFIIVLQGKCRRMPKPDF----EDTNPNERGHSNNRPGYRRRQARFYFWRITSKLVAIAFYFTVSLVLRYYDTNNQYFNFSNDPYTIITSSEGKHPNVLSGSDYANSIIYASCNFVVTLLAGLMGYALLRWHWREVFRQLAPIARTLAHNHTFIGFIAAIIAHNGLLAIVFLQYH 562          
BLAST of Gcaud3574.t1 vs. uniprot
Match: A0A0D2VYT8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VYT8_CAPO3)

HSP 1 Score: 168 bits (426), Expect = 4.900e-41
Identity = 140/438 (31.96%), Postives = 232/438 (52.97%), Query Frame = 0
Query:  103 LLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFR--TSLAPL-IAVFLAEIAIMSPVLLTHGIYD-W--IGIVALTVCYLA----LFVALRVTYHTHHQLVHAFFRRFMFL-----LILFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLGDLTTILAFPQVSRP--AVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTYVLNGI-------KGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKEFTPLA-----------TFTRTQYRHSMIYAAANLVFIAAVAALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAIILSHY 505
            LL FLVP+A + + + ++PLG+     +S++ V+IFV N       SYL    F AC     P+R  TS   + +  +L E       L+ +G+++ W  +G+VAL V  +     L+ +  + Y     L   FFR  +FL     L++ + +L+ + IA+R  SS   QS +SF+   +TF++++I+LS  D FP+EIS L++G W+++L D   I+A+PQV  P  A + A+  S  + N+A+L+F++D W ++ R  +K + L G+       K   PI       E  D  +RGH     GY RRQ +FF +++LSQ  S   +LS++P LRFGLN  F P +             T +Q+R+ + +  A           GY+++ +R  + F +I  I +   +  T++G+V  II  N +L +AI+ + Y
Sbjct:  559 LLTFLVPIALIVLFYNVIPLGDVD-GALSDKLVWIFVVNPVTFSLFSYLNCIVFCACLDDSVPWRPLTSFIHICVGTYLGESVFF---LIFYGLFESWHAMGLVALLVAMICTMGGLYFSQAIIYPQSPALY--FFRLKVFLKVEICLLILMGLLTLYTIAFRVGSSSV-QSILSFVLFIVTFIFKKILLSITDVFPIEISMLIAGLWMEHLDDTFAIVAYPQVENPESATFFAVAASKFIQNMAYLLFLTDVW-FRFRVWIKAF-LKGVFTCRGTDKSQVPI-------EKDDIEDRGHSNVKPGYHRRQVQFFMWKVLSQLHSCIFFLSVAPGLRFGLNNSFYPFSEHVTQAAGSVTVLTSSQFRNCLYFVTALFFMFLFSGVAGYYFIKRRIPRVFADISAIVRTVFLGPTYIGIVLMIICCNQLLAVAILQAQY 980          
BLAST of Gcaud3574.t1 vs. uniprot
Match: A0A7S3U9V5_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U9V5_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 6.430e-7
Identity = 91/406 (22.41%), Postives = 160/406 (39.41%), Query Frame = 0
Query:   77 YDPESFSEEAHGFAGRIVKRMGIFAYLLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISYLYNATFLACARIERPFRTS---LAPLIAVFLAEIAIMSPVLLTHGIYDWIGIVALTVCYLALFVALR------VTY------------------------------------HTHHQLVHAFFRRFMFLLI---LFIPILSAFVIAYRETSSGALQSFISFMFAFITFVYRRIMLSRLDP--------FPLEISQLLSGFWVQNLGDLTTILAFPQVSRPA-VYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTYVLNGIKG-NFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQAISMFMYLSISPMLRFGLNKEFTP 424
            Y  +S     H +AG ++   G    L+  + P A V I++ ++PL +      ++Q VF+  +N    V I++     F+ C     P+R        L AV+L ++AI +P++LT G Y   G++AL +  + + V +R      V Y                                    H  ++ +H   R + ++L    +   +  A++ AY+E S+G L +    +  FI     R  L  L          F +++S L+   WV +   +    A P        +  IF    + ++   +       ++ R  +K +    ++      P +    E  D   RG     G YRR + RF +F  L        Y+ +S +LR+G NKEF P
Sbjct:  241 YGMDSSGNMKHPYAGNVLH--GFIIALVGVIFPSAIVVILYGLIPLQSVEDCTFTQQAVFLLFTNPMSYVIIAFTQITIFIGCIDQRLPWRPLSKYAVILAAVYLIQVAIAAPIVLTVGYYAMQGLIALALNTVVVCVGIRLRLRGLVEYGRKHFPNIVDPAQEAENWDKTPNQSNAEAPLGKKWKHGLYKEIHRKARVYYWILATQTITYFVYFAWIYAYKEASTGGLIALT--IMQFIVGTGSRKSLQHLTSRKWTGGGMFQIDVSFLICSAWVFSAKGVFVAFATPNFDASVGAFVIIFLEEFVGSILIAMLHHSQLWFRFRCWIKIWPRTFVRCIRRQDPEVIPIYEDMDLDGRGVTNAHGDYRRTKIRFDYFNFLGNITGYTCYVIVSVILRYGPNKEFFP 642          
The following BLAST results are available for this feature:
BLAST of Gcaud3574.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J169_9FLOR3.590e-28177.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7C2_CHOCR2.400e-19867.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NTD4_PORUM6.570e-13445.16Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TE76_9RHOD2.600e-11646.65Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
L8H9Q6_ACACA1.980e-4329.24Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A0D2VYT8_CAPO34.900e-4131.96Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A7S3U9V5_9CHLO6.430e-722.41Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..418
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 503..518
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..309
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..335
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 438..458
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 479..502
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 310..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 336..392
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..190
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 250..254
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 459..478
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 419..437
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 480..502
NoneNo IPR availableTMHMMTMhelixcoord: 254..271
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 437..459
NoneNo IPR availableTMHMMTMhelixcoord: 170..189
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 392..414
NoneNo IPR availableTMHMMTMhelixcoord: 227..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_9_length_88726_cov_4.624437contigNODE_9_length_88726_cov_4.624437:67425..68981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3574.t1Gcaud3574.t1Gracilaria caudata M_176_S67 malemRNANODE_9_length_88726_cov_4.624437 67425..68981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3574.t1 ID=Gcaud3574.t1|Name=Gcaud3574.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=519bp
MCNESPPLGPTPPPATSGVPVVAAEPMPGSKCHLCHRDAEKPSQPEQQPT
ADAKSLPPAHAHHRSISVDEKGYFTVYDPESFSEEAHGFAGRIVKRMGIF
AYLLFFLVPLAFVAIVFAIVPLGNPTVPNISEQWVFIFVSNSAVAVAISY
LYNATFLACARIERPFRTSLAPLIAVFLAEIAIMSPVLLTHGIYDWIGIV
ALTVCYLALFVALRVTYHTHHQLVHAFFRRFMFLLILFIPILSAFVIAYR
ETSSGALQSFISFMFAFITFVYRRIMLSRLDPFPLEISQLLSGFWVQNLG
DLTTILAFPQVSRPAVYAAIFFSNALSNVAFLVFVSDPWIYKIRPTLKTY
VLNGIKGNFPIPPIPEADESFDPVNRGHDANTGGYRRRQFRFFFFRLLSQ
AISMFMYLSISPMLRFGLNKEFTPLATFTRTQYRHSMIYAAANLVFIAAV
AALGYFYLHKRHHQTFHEIREIHKHDLVHHTWVGLVTAIITHNLILTIAI
ILSHYCIFSSFQGCVFVT*
back to top