Gcaud3490.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3490.t1
Unique NameGcaud3490.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length231
Homology
BLAST of Gcaud3490.t1 vs. uniprot
Match: A0A2V3IR82_9FLOR (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR82_9FLOR)

HSP 1 Score: 317 bits (813), Expect = 6.730e-106
Identity = 140/230 (60.87%), Postives = 180/230 (78.26%), Query Frame = 0
Query:    1 MSPLPASYAETALLAFHYASLFKGLCIHLVLTHPFPLKHPVPWVHAVHHVDHHDLIPILSEPQRPEQHRVIILSALRQQHTPLLRKLASVHADAIILFNSFLDEPLITPVYPFIDTYVVRALQKSAVMRARYDAPWHVFIEIAVFEYEWVGNCDNNWRPTQRRVDNFALKRDAHTKSINGYWRTPYAGCEAGFWPFMTLACRELLPLDGRVLAQIDKEKKQKAQRPFGFF 230
            MSP+ AS+ E+ LLAFH+A LFKGLCIHLVL  P  L H VPW+HAVH V HHDL   L+ P RP++ RV+IL+AL   H PL+++L S++A A++LFN  L  P+  PV PF + Y+ RAL K A+    ++APWHVF+EIAVFEYEWVG+CDN W+P+QR V+ FA++R+A  KSINGYWRTPYAGCEAGFWPFM++ CR++LP+DGRV+A+  +EK +K QRPFGFF
Sbjct:  101 MSPIAASHEESCLLAFHFAELFKGLCIHLVLPQPCTLVHSVPWIHAVHLVHHHDLFATLAVPPRPDERRVVILAALHDHHLPLIKQLVSINAQAVLLFNCLLQHPMSEPVPPFTNVYISRALNKCAIFLNGHNAPWHVFVEIAVFEYEWVGDCDNEWQPSQRAVERFAVERNAQLKSINGYWRTPYAGCEAGFWPFMSVVCRDVLPVDGRVIAKTREEKLKKNQRPFGFF 330          
BLAST of Gcaud3490.t1 vs. uniprot
Match: R7QTI1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTI1_CHOCR)

HSP 1 Score: 157 bits (397), Expect = 3.710e-44
Identity = 93/236 (39.41%), Postives = 129/236 (54.66%), Query Frame = 0
Query:    1 MSPLPASYAETALLAFHYASLFKGLCIHLVLTHPFPLKHPVPWVHAVHHVDHHDLIPILSEPQRPEQHRVIILSALRQQHTPLLRKLASVHADAIILFNSFLDEPLITPVYPFIDTYVVRALQKSAVMRARYDAPWHVFIEIAVFEYEWVGNC--DNNWRPTQRRVDNFALKRDAHTKSINGYWRTPYAGCEAGFWPFMTLACRELLPLDGRVLAQIDKEKKQK----AQRPFGFF 230
            MSP   +  E+++LA H+A +FKGL + + +         V W   V      DL       +  E   V+   A R++    + + AS  A A++LFN  +D P+        D YV RA+ K AV+R    APW VF+EIAVFEYEWVG+   +  W P Q  V+ +   R A +K + GYW T ++GCE GFWPFMT+A  E LP+DGR + +  +EK +K    A RPFGFF
Sbjct:   17 MSPPAMAVRESSVLALHFAQIFKGLRLVIAMAEGAEPAQKVDWAAVV------DLSDASRVVRDAEVVVVVGAGAGRRREVDQVLE-ASRLARAVVLFNCLMDAPIEDRWERAEDVYVCRAMDKCAVLREGAGAPWSVFVEIAVFEYEWVGDRREEAGWVPAQGNVERYVASRGA-SKKVKGYWSTAFSGCEGGFWPFMTIAMTETLPIDGRAMEEERQEKAEKKNKKAGRPFGFF 244          
BLAST of Gcaud3490.t1 vs. uniprot
Match: A0A1X6P5D4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5D4_PORUM)

HSP 1 Score: 82.0 bits (201), Expect = 2.070e-14
Identity = 50/141 (35.46%), Postives = 65/141 (46.10%), Query Frame = 0
Query:   60 SEPQRPEQHRVIILSA--LRQQHTPLLRKLASVHADAIILFNSFLDEPLITPVYPFIDTYVVRALQKSAVMRARYDAP--WHVFIEIAVFEYEWVGNCDNNWRPTQRRVDNFALKRDAHTKSINGYWRTPYAGCEAGFWPF 196
            + P  P    ++I  A   R      L   A+    A++LFN FL+             YVVRAL K AV+ A + A   W VF EIAVF+YE +      W PT   V           + ++GYW +   GCEAGFWPF
Sbjct:  314 ATPTSPALDVLVIAGARPCRASSVAALVAAATAAGTAVVLFNCFLEAEWTPGPAGVTPVYVVRALDKGAVLLAGHGAAEEWEVFGEIAVFQYEAMTTAPRGWVPTTAAVHAALAGVGGRREGLSGYWGSLGPGCEAGFWPF 454          
The following BLAST results are available for this feature:
BLAST of Gcaud3490.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IR82_9FLOR6.730e-10660.87DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
R7QTI1_CHOCR3.710e-4439.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P5D4_PORUM2.070e-1435.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_968_length_15659_cov_4.393885contigNODE_968_length_15659_cov_4.393885:14684..15376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3490.t1Gcaud3490.t1Gracilaria caudata M_176_S67 malemRNANODE_968_length_15659_cov_4.393885 14684..15376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3490.t1 ID=Gcaud3490.t1|Name=Gcaud3490.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=231bp
MSPLPASYAETALLAFHYASLFKGLCIHLVLTHPFPLKHPVPWVHAVHHV
DHHDLIPILSEPQRPEQHRVIILSALRQQHTPLLRKLASVHADAIILFNS
FLDEPLITPVYPFIDTYVVRALQKSAVMRARYDAPWHVFIEIAVFEYEWV
GNCDNNWRPTQRRVDNFALKRDAHTKSINGYWRTPYAGCEAGFWPFMTLA
CRELLPLDGRVLAQIDKEKKQKAQRPFGFF*
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