Gcaud3457.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3457.t1
Unique NameGcaud3457.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length90
Homology
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BLAST of Gcaud3457.t1 vs. uniprot
Match: A0A2V3J3L2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L2_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 6.960e-35
Identity = 60/74 (81.08%), Postives = 63/74 (85.14%), Query Frame = 0 
Query:    1 MASGHAGRQWLEALKFSVYIVTPIAATVYLGTGAYPYLERIIHNTSYIVYPPEGEAPPT-----STKEIKRARE 69
            MASGHA RQWLEALKFSVY+VTPIAATVYLGTGAYPYLER+IHNTSYIVYPPEGEAPP      S  E KR +E
Sbjct:    1 MASGHAARQWLEALKFSVYVVTPIAATVYLGTGAYPYLERMIHNTSYIVYPPEGEAPPNLHGKCSESEKKREQE 74
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BLAST of Gcaud3457.t1 vs. uniprot
Match: A0A1X6NRP5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRP5_PORUM)

HSP 1 Score: 78.6 bits (192), Expect = 5.510e-17
Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 0 
Query:    8 RQWLEALKFSVYIVTPIAATVYLGTGAYPYLERIIHNTSYIVYPPEGEAPPTSTKEIKRAREER 71
            R+ LE  KFSVY++ PI A+ + G+GAYPYLERII   SY+VYPPEG APP   +  +    ER
Sbjct:   21 RRRLEGFKFSVYVLLPIGASYFFGSGAYPYLERIIQQRSYVVYPPEGPAPPKPNEMSRLVERER 84
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BLAST of Gcaud3457.t1 vs. uniprot
Match: A0A443NR25_9MAGN (Sporulation-specific 71 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NR25_9MAGN)

HSP 1 Score: 50.8 bits (120), Expect = 1.770e-6
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0 
Query:    1 MASGHAGRQWLEALKFSVYIVTPIAATVYLGTGAYPYLERIIHNTSYIVYPPEGEAPPTSTKEIKRAREER 71
            M+S    +  LE  KF++Y+  PI   +Y       +L++++ N SY+VYPPEG  PP+  +  + ARE R
Sbjct:    1 MSSLGTSKGILEIAKFALYVSVPITL-MYSFAHNSEFLQKVVRNRSYVVYPPEGPRPPSPEELREMAREMR 70
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BLAST of Gcaud3457.t1 vs. uniprot
Match: UPI0007EFEE86 (uncharacterized protein LOC108200837 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFEE86)

HSP 1 Score: 50.1 bits (118), Expect = 3.710e-6
Identity = 25/69 (36.23%), Postives = 37/69 (53.62%), Query Frame = 0 
Query:    1 MASGHAGRQWLEALKFSVYIVTPIAATVYLGTGAYPYLERIIHNTSYIVYPPEGEAPPTSTKEIKRARE 69
            M+S    +  LE  KF+VY+  PI    +     +  L+R +    Y+VYPPEGE PP+  +  + ARE
Sbjct:    1 MSSLGTSKGVLEVAKFAVYVTVPIGLMYFFANNTHN-LQRFMGARQYVVYPPEGERPPSPEEIREMARE 68
The following BLAST results are available for this feature:
BLAST of Gcaud3457.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J3L2_9FLOR6.960e-3581.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NRP5_PORUM5.510e-1754.69Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A443NR25_9MAGN1.770e-636.62Sporulation-specific 71 n=1 Tax=Cinnamomum micrant... [more]
UPI0007EFEE863.710e-636.23uncharacterized protein LOC108200837 n=1 Tax=Daucu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018625Protein Pet100PFAMPF09803Pet100coord: 9..75
e-value: 1.1E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..38
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_133_length_45383_cov_4.895280contigNODE_133_length_45383_cov_4.895280:5684..6021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3457.t1Gcaud3457.t1Gracilaria caudata M_176_S67 malemRNANODE_133_length_45383_cov_4.895280 5684..6021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3457.t1 ID=Gcaud3457.t1|Name=Gcaud3457.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=90bp
MASGHAGRQWLEALKFSVYIVTPIAATVYLGTGAYPYLERIIHNTSYIVY
PPEGEAPPTSTKEIKRAREERIWKRQPHSIDSQMSEKVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018625Pet100