Gcaud3325.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3325.t1
Unique NameGcaud3325.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length315
Homology
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A2V3ISW7_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISW7_9FLOR)

HSP 1 Score: 426 bits (1095), Expect = 2.640e-148
Identity = 198/267 (74.16%), Postives = 231/267 (86.52%), Query Frame = 0
Query:   47 MDEDVAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVPFDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGC 313
            MD D   DD+MG++TT+  GYFRV GSA D+AIRK+KRRPDVY+R+ YRHSS+KA FEVDR  +RGGKEES TK N++GNVDFGTLHFNTEMCR+YQRFY+A HDFY+RVGYRVPFDLKIKAQAIIHGG P+ALYD IRIPKG++VS  TA+HELAHAVRHRYDG++AHFLKDV+KY YTRNHHC ++TNLGFAFNEGWAE+WA +  CG A+GSK+VEGNVAAAL+ LQ  C   DH+MWEVLRRNRGKIH+YY F  +H  L+GC
Sbjct:    1 MDNDPIIDDFMGSTTTDANGYFRVRGSARDIAIRKKKRRPDVYVRLQYRHSSSKAKFEVDRPVLRGGKEESHTKKNRKGNVDFGTLHFNTEMCRIYQRFYDAIHDFYNRVGYRVPFDLKIKAQAIIHGGAPFALYDKIRIPKGKTVSFQTAQHELAHAVRHRYDGSLAHFLKDVIKYVYTRNHHCLQSTNLGFAFNEGWAEYWARDY-CGTASGSKKVEGNVAAALRSLQTRCRTSDHNMWEVLRRNRGKIHSYYSFASKHKRLYGC 266          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A2V3IE08_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE08_9FLOR)

HSP 1 Score: 401 bits (1030), Expect = 2.130e-138
Identity = 186/268 (69.40%), Postives = 223/268 (83.21%), Query Frame = 0
Query:   47 MDEDVAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVPFDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGCT 314
            MDEDV  DD+MG++TT+  GYF VSG+A+DVA RK KRRPDVYIR+DYRHSS +A FEVDR+ +RGGKE+S    +K GNV+FGTLHFNTEMC +YQRFY+ATHDFY RVGYRVPFDLKI AQAII+GG P+AL+D IRIPKG+ +S+ TAKHELAHAVRHRYDG +AHFLKDV ++ YTRNH+C   TN GFAFNEGWAE+WAG+TACGDANG+K+VEGNVA ALK +Q  C   D +MWEVLRRN+GKIH+Y  +  +H  +  C+
Sbjct:    1 MDEDVGRDDHMGSATTDGNGYFTVSGTASDVAFRKSKRRPDVYIRLDYRHSSARARFEVDRSVLRGGKEDSHKFSDKSGNVNFGTLHFNTEMCTVYQRFYDATHDFYSRVGYRVPFDLKITAQAIINGGAPFALHDEIRIPKGKKLSSRTAKHELAHAVRHRYDGGLAHFLKDVAQFVYTRNHNCKSNTNHGFAFNEGWAEYWAGDTACGDANGTKKVEGNVATALKEMQTRCRTSDRNMWEVLRRNKGKIHSYSSYASKHRQMHNCS 268          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A8J1YD35_OWEFU (Ofus.G2745 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1YD35_OWEFU)

HSP 1 Score: 211 bits (537), Expect = 4.000e-63
Identity = 118/289 (40.83%), Postives = 168/289 (58.13%), Query Frame = 0
Query:   24 YTVHASGRILCDGQPLKNSQITLMDEDVA--FDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVP-FDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSK-RVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHG 308
            Y V ASGR  C G P+ ++++ + D ++   +   + +  T+  G F +SG   DV   K    PDVY+++DY +     +   DR +    + +S  K N  G  + GT++ N E C+ Y  F  A  DF  R G  +P   + +   A+IHGGTP+A+   IRIP G S++  TAKHELAH  RH  DG+ AHFL DV +YGY RNH+   +TN GFAFNEGWAE+WAG+ +    +G+  ++EGNVAAAL +L    G     MW+ L  NRG+IH+Y +F +  G
Sbjct:   31 YDVSASGRFTCGGTPIADARVYIKDRELVGIYGKTIASGWTDANGGFSLSGRGRDVFDGK----PDVYVQLDYNYQDK--MMVKDRISSTR-RYKSSWKKNFSGAFNIGTVNLNDEHCKAYNHFRNAVRDFISRAGRPLPRSSVYVVTNALIHGGTPWAMTQRIRIPSGYSLTGNTAKHELAHIARHTLDGSAAHFLVDVARYGYARNHNLYMSTNEGFAFNEGWAEYWAGDCSYTSGDGTDMKIEGNVAAALCKLAKCKG--HPAMWKTLEANRGRIHSYNDFVQRMG 310          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A1X6PAB8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAB8_PORUM)

HSP 1 Score: 210 bits (535), Expect = 2.050e-62
Identity = 130/317 (41.01%), Postives = 178/317 (56.15%), Query Frame = 0
Query:   15 LALVALASGYTVHASGRILC---DG--QPLKNSQITLMDEDV--AFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTKALFEVD--------RTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVPFD-LKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDAN--GSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGC 313
            LA  A+    T+ A+GR +C   DG  +P+  S I LM+ +   A D+ MGT TT   G FRV+G   D  I  R  RPD Y+R+ YR        +VD         T  RG K  + T+ N++ +VD+G +  ++  C+ Y  F  A  +F  R G   P   L ++ +A+IHGGTP+ LYD I++P+   VS     HELAH VRH  DG+  HF  D  ++ YTRNH+C   +N G+AFNEGWA +WA E          + RVEGNVA+AL+ LQ  CG  D  M EVL ++RGK+H++ +F   H  LFGC
Sbjct:   31 LAPAAVDGRKTITATGRFVCAFPDGRIEPIAGSDIRLMNRNAVPAIDERMGTGTTAADGSFRVTGRGGDPGI-GRGTRPDPYVRLVYRSVGATHDIDVDISRPILRSLTGYRGDK--TPTRRNEKRDVDYGKVTISSLECQAYVDFRAAMINFKARTGKATPGGRLPVRTRALIHGGTPFTLYDAIKLPRKTRVSRGLGMHELAHVVRHVLDGSAIHFGIDAARFFYTRNHYCELESNEGYAFNEGWAAYWARECMFDTVAPLDNYRVEGNVASALRALQLRCGSTDGRMVEVLEQSRGKVHSFPDFLNRHKALFGC 344          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A1X6PFP4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFP4_PORUM)

HSP 1 Score: 201 bits (512), Expect = 5.630e-59
Identity = 126/317 (39.75%), Postives = 172/317 (54.26%), Query Frame = 0
Query:   15 LALVALASGYTVHASGRILCDG-----QPLKNSQITLMDEDV--AFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRH--SSTKALFEVDRTAIRG----GKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVPFD-LKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDAN----GSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGC 313
            LA  A+ +  T+ A+GR LC       +P+  S I LM+ +   A D  M T TT   G FRV G   D  I  R  RPD Y+R+ Y+   +      E+ R  +R       +++ T+ N++ +VD+GT+   +  C+ Y  F  A  DF  R G   P   L ++ + +IHG T YALYD I++P+   VS   A HELAH VRH  DG   HF  D  ++ YTRNH C   +N G+AFNEGWA FWAGE  C +       + RVE NVAAAL+ LQ  CG  D  M EVL ++   +H++ +F+  H  LFGC
Sbjct:   31 LAPAAVDARKTITATGRFLCQTAGGSLEPIAGSDIRLMNRNAVAAIDARMATGTTAADGTFRVRGRGGDPGI-GRGTRPDPYVRLMYKSIGADHDIHVEISRPILRSLTNYRGDKTATRRNEKRDVDYGTVIIRSLECQAYVAFRAAMIDFKARTGINTPGGRLPVRTRVLIHGDTAYALYDAIKLPRKTFVSPQLATHELAHVVRHVLDGNAIHFGIDAARFIYTRNHRCELESNHGYAFNEGWAIFWAGE--CQNRTVAPLDNYRVEANVAAALRALQSRCGSTDGRMVEVLAKSPRSVHSFPDFQTRHKALFGC 344          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A8J1U8J1_OWEFU (Ofus.G101040 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U8J1_OWEFU)

HSP 1 Score: 189 bits (480), Expect = 1.220e-54
Identity = 115/296 (38.85%), Postives = 162/296 (54.73%), Query Frame = 0
Query:   17 LVALASGYTVHASGRILCDGQPLKNSQITLMDEDVAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRV-GYRVPFD-LKIKAQAIIH--GGT--PYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFERE 306
            L A A G+ V   GR  C G  +KN+ + L+D+D   DD +    T+E G F +SG   D         PDV+I+++Y + +   +   DRT +R   E S   +N  G  D GT++ N E CR+YQ F EA  D+  R     +P+D L +   A++    GT  P++  DTIR+P G  ++ TTA+HELAH +RH  DG   H+  D+  Y Y + HHC   +N GFAFNEGWA +W+G   C + +    VEG+VAA L  L       D  MW++L  N G IH+Y EFE +
Sbjct:   14 LTAGAFGHDVSIRGRFTCGGAAVKNALVRLLDQDYLVDDILADGWTDENGEFELSGDGVDGW----NGNPDVFIKLEYNYLNK--MVVKDRT-LRVRYETSEITNNFSGKSDIGTINVNNEHCRVYQLFREAILDYTLRSENDNLPYDYLTVHTDALLSLVSGTRKPWSNIDTIRVPGGYPLNATTARHELAHTLRHAMDGGRLHWWADISSYSYVQPHHCNMRSNPGFAFNEGWAIYWSGNCKCSEGS-DMNVEGHVAARLCELARCKS--DSQMWDILESNPGTIHSYAEFEEK 299          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A8J1UMZ2_OWEFU (Ofus.G1868 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UMZ2_OWEFU)

HSP 1 Score: 189 bits (480), Expect = 1.520e-54
Identity = 107/284 (37.68%), Postives = 156/284 (54.93%), Query Frame = 0
Query:   24 YTVHASGRILCDGQPLKNSQITLMDEDVAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGY-RVPFD-LKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSK-RVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFE 304
            +TV  +G+  C G P++N  + L+D+DV FDD M +  TN  G F ++G   D    K    PD + +++Y + +      V     R     S  K N  G  + GT++ N E CR Y  F  A   +  + G   +P+  L +++ A++  GTP+A  +++R+P G S+   TAKHELAH VR   DG+  HFL DV+++ Y + H C K TN GFAFNEGWAE+W G+ +C  + GS  R EGNVAA L +L    G     MW V+     +IH+Y  F+
Sbjct:   25 HTVTITGKFTCGGVPIRNCLVRLVDDDVLFDDTMKSGWTNSNGEFTLTGKGRDAFDTK----PDPFAKIEYNYINR---MRVKDRLGRTRWNRSSKKKNFSGIYNVGTVNINNEHCRAYLHFRSAIIHYLAQSGNGALPYSSLSVRSNALLTAGTPWATRNSVRLPGGYSLDYDTAKHELAHTVRQTLDGSFGHFLYDVIRFKYAQTHSCNKFTNFGFAFNEGWAEYWEGQCSCVTSGGSDMRYEGNVAACLCKLAACKG--HTRMWNVVESYPKQIHSYSSFK 299          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A2V3IFX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFX2_9FLOR)

HSP 1 Score: 161 bits (407), Expect = 9.960e-44
Identity = 106/313 (33.87%), Postives = 150/313 (47.92%), Query Frame = 0
Query:    7 FRLFLTATLALVALA-----SGYTVHASGRILCDGQPLKNSQITLMDEDVAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKR-RPDVYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVPFDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGC 313
            F L L+A L L ALA      G +V  SG + C G+P+  S+I L+ +     + +     +E G F ++        RKR      +Y+ + Y + S        R A       +       G  D G +  +   C  Y R Y A  DF  R G  +   +++    +  G  P++ Y  IR+P    ++   A+HELAH  R+ +DG  AHF +DV  YG T  H+C   ++  FAFNEGWA +WA E      N  K V G+VA  L+ LQ+ C   D+DMW VL +N GKIHTY E+E  H  L  C
Sbjct:    7 FILPLSALLLLPALAFSQCLRGSSVTVSGVLTCSGKPIPFSEIRLVQDIGIIPNSIAIGEADENGRFSITAKPFSFVRRKRPLWELSLYVGLKYTYKSN------SRRAFAVNPRFAQVLDFHEGVHDIGEVAVHEYPCNTYIRLYNALKDFNTRTGRELR-AIRVAVHNLPKGSVPFSEYRRIRLPIKYLLTDHIARHELAHVARNVFDGDSAHFEQDVEAYGGTETHNCQTKSSTEFAFNEGWAFYWARECQGSTFNRQKDVGGDVAKLLRELQEQCNTSDNDMWVVLEKNPGKIHTYDEYENAHKSLHSC 312          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A2V3IFZ6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFZ6_9FLOR)

HSP 1 Score: 160 bits (406), Expect = 1.300e-43
Identity = 96/304 (31.58%), Postives = 152/304 (50.00%), Query Frame = 0
Query:   15 LALVALASGYTVHASGRILCDGQPLKNSQITLMDEDVAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPD----VYIRVDYRHSSTKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRVPFDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGCT 314
            LAL        V  +G + C G P++ + + L+ E     + +   +T+ QG F ++    +     R+ +P+    +Y+  +YR+++ K  F    + +      +G         D G +  N   C  Y RF+ A  DF  R G +V     I ++ +  G  P+  +  +R+PK   ++   AKHELAHAVR++YDG + HF +D   YG    H+C+  +++ FAFNEGWA +WAGE    +    K V G+VA  L+ LQ  C   D+DM  VL ++ G IH++ EF   H  LF C 
Sbjct:   18 LALCQCLGSSNVTVTGTLTCAGMPIRRTTLKLVQELGFVPNKLAEGSTDGQGRFYLTAVPFEFF---RRNKPNWQLTLYVGFNYRYNNNKKAFSSGPSYVHLLDFHTGYH-------DIGEIAINLYACNTYMRFFNAVQDFNKRTGRQVRALRHINSR-LPQGSVPFTEWRWVRLPKKYLITNRIAKHELAHAVRNKYDGDLDHFRQDAQLYGGVETHNCSTKSSVHFAFNEGWAFYWAGECRQHEFTKQKDVAGDVAKMLRTLQKRCNTSDNDMVVVLEKHPGSIHSFDEFRSAHNNLFACV 310          
BLAST of Gcaud3325.t1 vs. uniprot
Match: A0A2V3IV93_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV93_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 1.610e-42
Identity = 94/262 (35.88%), Postives = 133/262 (50.76%), Query Frame = 0
Query:   57 MGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSS---TKALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATHDFYDRVGYRV-PFDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHELAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWAGETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTYYEFEREHGYLFGCT 314
            +G   T+  G F ++GS  DV +  R     + + V+Y +      + +F +D   +      S   H       FG L  +   C++Y  F  A  D+  RVG +  PF   I  +  I G  P+  +  + +P+G S++   AKHE+ H +R+  DG+  H+ +D   YG    H C   T++ FAFNEGWA +WAG+    DANG K VEG+VA  L+ LQ  C  RD DM EVLRRN   IHTY EF + H  L  C 
Sbjct:   12 IGFGVTDVSGRFSITGSPRDVVLGARNEWT-IVLAVEYLYQDEVLNEKVFGIDPWTMITRTVHSNGLH-------FGDLDLDEPSCKMYMNFLNAVKDYKQRVGIKFEPFH--ILGRERISGPVPFVEWSNVYVPEGFSMTNELAKHEVGHILRNTLDGSYEHYNQDRENYGGYDGHGCRTKTSIQFAFNEGWALYWAGQCMGSDANGQKDVEGDVAEMLRNLQARCDTRDSDMVEVLRRNPKLIHTYDEFAKGHKKLTSCN 263          
The following BLAST results are available for this feature:
BLAST of Gcaud3325.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3ISW7_9FLOR2.640e-14874.16Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IE08_9FLOR2.130e-13869.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A8J1YD35_OWEFU4.000e-6340.83Ofus.G2745 protein n=1 Tax=Owenia fusiformis TaxID... [more]
A0A1X6PAB8_PORUM2.050e-6241.01Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PFP4_PORUM5.630e-5939.75Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A8J1U8J1_OWEFU1.220e-5438.85Ofus.G101040 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A8J1UMZ2_OWEFU1.520e-5437.68Ofus.G1868 protein n=1 Tax=Owenia fusiformis TaxID... [more]
A0A2V3IFX2_9FLOR9.960e-4433.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFZ6_9FLOR1.300e-4331.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV93_9FLOR1.610e-4235.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001534Transthyretin-likePFAMPF01060TTR-52coord: 29..92
e-value: 3.0E-11
score: 43.7
IPR038479Transthyretin-like superfamilyGENE3D2.60.40.3330coord: 24..129
e-value: 1.1E-12
score: 50.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..314
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_135_length_45127_cov_4.991851contigNODE_135_length_45127_cov_4.991851:14977..15921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3325.t1Gcaud3325.t1Gracilaria caudata M_176_S67 malemRNANODE_135_length_45127_cov_4.991851 14977..15921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3325.t1 ID=Gcaud3325.t1|Name=Gcaud3325.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=315bp
MNFLSAFRLFLTATLALVALASGYTVHASGRILCDGQPLKNSQITLMDED
VAFDDYMGTSTTNEQGYFRVSGSANDVAIRKRKRRPDVYIRVDYRHSSTK
ALFEVDRTAIRGGKEESGTKHNKRGNVDFGTLHFNTEMCRLYQRFYEATH
DFYDRVGYRVPFDLKIKAQAIIHGGTPYALYDTIRIPKGESVSTTTAKHE
LAHAVRHRYDGTMAHFLKDVVKYGYTRNHHCTKTTNLGFAFNEGWAEFWA
GETACGDANGSKRVEGNVAAALKRLQDTCGVRDHDMWEVLRRNRGKIHTY
YEFEREHGYLFGCT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001534Transthyretin-like
IPR038479Transthyretin-like_sf