Gcaud3253.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud3253.t1
Unique Name	Gcaud3253.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	1566

Homology

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BLAST of Gcaud3253.t1 vs. uniprot
Match: A0A2V3IN50_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN50_9FLOR)

HSP 1 Score: 689 bits (1778), Expect = 1.670e-228
Identity = 356/566 (62.90%), Postives = 444/566 (78.45%), Query Frame = 0

Query: 1003 QPPSFDIRMQIVSLTERIHTLSGNVVSAAKAINMGLETIARSQENRVNLMKWWAYFRSRAIQNALACDHSMQHASDIALETAEQCLNNGDRISAVGFFLSQCQVALANTSPRVIVSPDFERARNCLMEIRPASPAQRYDITTLSICQCILEAFSFFRIGHVTEVSSHVMSRLQEAYAKARALKSAGNVK----ANWKWLNMDVIAALAFYILSVVRRNDNGGDVRPKNHPTRMVLIALTKIGISPKALRELKASDLNIVGVSKGAKVALCAALFEGAARSYLAEGNLREAGVFLSTAARFVFSDSLSRELISRAEKGENIDMSPVLSTDLPYSELLQRNALFLLISEYHSLRASLSAARIATKFLQAIKMFPVRLRSDKGVTCITDSWQLAVSHLSLLVGTERAKSPFEDEDSHPGAAGTFEEDVSRADFVSNQVLAMALFTVGVYHLRKPAIIEAQRALSAAIDLLKDVKSLNKQAVANALAVYSGVGMLHLSITKKDCNMTQEAVSLARAINDPVTMVRTCRQKRKLVHRLGFGNAEKQKSEKLLREAMAMSEAKRKQASPYIL 1564
            QP SF+IRMQ+ +L ERI+T + + ++AAK IN GLE IARSQE+R +LMKWW YFR RA+ NAL   +S QHA+ IA ETA+QC+N+GD ISA GFFL+QCQV+LANTSPR  + PDFERA +CL    PASP QR ++  L++C  +LEA S FR+G++ EV S ++ RLQ AYAK RALK+  NV+    ANWKW+N++VIAALAF+IL VVRR  + G  RPK+HPTRM L+AL K+GI P+ L  LK SDLN+ GVS+ A  ALC AL EGAARSYLAEG+LREA +F+S AA+ VF DS SR+LIS+ E GE++D++PV+   +P+ ELLQR+AL LL+SEYHSLRA++S AR+AT+FLQAIK  P R+R   G   +TD+WQ A+SHLSLLVG ER K P EDE   P    + EEDV R DF + QVLAMALFTVGVY+LRKPAIIEAQRAL+A+ID+LKDVK+LN+QA+AN LAVYS +GMLHLSIT KD NMT EAV+LA+ INDP+TMVR CRQ+RKL+HRLG  + EK ++E+LLR+AM +SE KRK A P+IL
Sbjct:   89 QPASFEIRMQVTALLERIYTANRDSLAAAKIINSGLEAIARSQEDRTSLMKWWIYFRGRAVGNALTTGNSTQHAAGIASETAQQCVNSGDHISAAGFFLAQCQVSLANTSPRTHLIPDFERALSCLTTASPASPIQRSEVIMLTVCHHVLEALSCFRVGNLAEVGSSIIGRLQAAYAKLRALKNTTNVRREINANWKWVNLEVIAALAFHILGVVRRGSSAGGKRPKSHPTRMALLALGKLGIPPRMLPNLKVSDLNVRGVSRTAIHALCVALLEGAARSYLAEGDLREASMFVSAAAKIVFIDSRSRKLISQVEHGEDVDLAPVVQITMPHGELLQRSALLLLVSEYHSLRATISGARVATRFLQAIKTLPARMRPVCGEVWVTDTWQQAISHLSLLVGMERMKHPLEDERFQPSTVNS-EEDVVRTDFTNAQVLAMALFTVGVYNLRKPAIIEAQRALNASIDILKDVKALNQQAMANVLAVYSSIGMLHLSITSKDSNMTIEAVNLAKTINDPITMVRACRQRRKLIHRLGIVDTEKAEAEQLLRDAMVISEGKRKLAVPHIL 653

The following BLAST results are available for this feature:

BLAST of Gcaud3253.t1 vs. uniprot

BLAST of Gcaud3253.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IN50_9FLOR	1.670e-228	62.90	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 980..1005
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 587..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 587..638
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 967..1007
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..449
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..638
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..515
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 482..497
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..455
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..296

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_138_length_44555_cov_4.790842	contig	NODE_138_length_44555_cov_4.790842:11458..17065 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud3253.t1	Gcaud3253.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_138_length_44555_cov_4.790842 11458..17065 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud3253.t1 ID=Gcaud3253.t1|Name=Gcaud3253.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1566bp
MPTNSTPSLPTSPSPTRKTFSSQHNVWNKLLFRAERRAPQTESHLYLPRD
PGDDHLRASLENYLINHQLQIDAVFRIPVREPSRPKRKAAKRCRPRQSTP
RVQQSRAPYVVHRIEADDEESDVVVVPKVPVLTVPSTNRNDDYIIRRKKS
SKPSESRSDIPLSQRLRNDRALYSELNPKPPSLLVPPQQHAPERSRRRVS
KTTPLSTMHNALSSLEPSEDSPTLYSCDSRAVASRIESTTNAVIDNSSIE
IVPVVCSQGTRIKSKRTRRNSKKPKGSSSLDRTTHGSNEQETLRLLSISS
SSDKDEIWAPKVVAASSERAYDFVEPKGYGSLERVKQGSKRDAAFMDIDS
DIGSSSEGESGRKAVRERPKQTKCDSKNPKGRGSLEKLKQSSNRDAAFRN
SDCHFDIGSASELEVSRAELVEAKPRRTKRNSEKPKVRESSKRTACGLKN
DAAEDGAGTFLSSEDDVSGSLAHVARPGRAKRDLNKSKRRGNEKKRKLRS
KRDTPLGLLSLTSSSDDEVSGPEDVAYRRRGFAFRKSVRNLSQTREYKDG
QNGSEDGIVVLPPDRGEMYRTPCESASFDLCQVNDGKDRNEAFPKHGDED
VRSRPPRLQRVGRERTNKRAERNSSLSPVPTQCGHTSRAAPKNGRCTNLP
KPSVISSELPNVSSEECWDLQPTEIVGNKNPKIHSEIMNEVLLPVQDNGH
RVLSPDVEIDDSIDGGNSEVAIDTALPGSSGCEKEGSRKGPCGSQEFPKD
CVLLKDGRMQELNATKAPSYIGRRQVTIPLTLRIRQPRPTHLGQNLEKKR
ETCGVRRKEKSKNIWKPVPVEKGTKGAIDEHKNGPERLSIPFDKATHQSS
SARERVTTNIQRGIHLANELKISTSSPRYSLRSCKQGSERNSDVRLGMKG
ARKREGRKSYNVNCLSLKSGAKTHESCEPSLSNQRIALSPPASFRSDVNE
VCELEISRSSDDGDIEAKNLCTGLPSPSRERPKITKKDLSPKWSSSRRPR
ERQPPSFDIRMQIVSLTERIHTLSGNVVSAAKAINMGLETIARSQENRVN
LMKWWAYFRSRAIQNALACDHSMQHASDIALETAEQCLNNGDRISAVGFF
LSQCQVALANTSPRVIVSPDFERARNCLMEIRPASPAQRYDITTLSICQC
ILEAFSFFRIGHVTEVSSHVMSRLQEAYAKARALKSAGNVKANWKWLNMD
VIAALAFYILSVVRRNDNGGDVRPKNHPTRMVLIALTKIGISPKALRELK
ASDLNIVGVSKGAKVALCAALFEGAARSYLAEGNLREAGVFLSTAARFVF
SDSLSRELISRAEKGENIDMSPVLSTDLPYSELLQRNALFLLISEYHSLR
ASLSAARIATKFLQAIKMFPVRLRSDKGVTCITDSWQLAVSHLSLLVGTE
RAKSPFEDEDSHPGAAGTFEEDVSRADFVSNQVLAMALFTVGVYHLRKPA
IIEAQRALSAAIDLLKDVKSLNKQAVANALAVYSGVGMLHLSITKKDCNM
TQEAVSLARAINDPVTMVRTCRQKRKLVHRLGFGNAEKQKSEKLLREAMA
MSEAKRKQASPYILS*