Gcaud3214.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3214.t1
Unique NameGcaud3214.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length200
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud3214.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036404Jacalin-like lectin domain superfamilyGENE3D2.100.10.30coord: 49..195
e-value: 2.5E-7
score: 32.8
IPR036404Jacalin-like lectin domain superfamilySUPERFAMILY51101Mannose-binding lectinscoord: 77..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_783_length_18051_cov_4.540757contigNODE_783_length_18051_cov_4.540757:6775..7374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3214.t1Gcaud3214.t1Gracilaria caudata M_176_S67 malemRNANODE_783_length_18051_cov_4.540757 6775..7374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3214.t1 ID=Gcaud3214.t1|Name=Gcaud3214.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=200bp
MNLFSVLCIALLVLLGAASATVKPLAPERPDDVFLPNTSRLENCNAAWRA
VPMGRYGDRNNATFFSTSPGFARDENIDSIVIHTSNILDGIDFHTNVRTY
SFGNSRPDQQIMSFQEGEELLAMRINVCHYRVGSMTNPMVGGVLFVTTKG
QVLKGGMDDPEWCQAYHLMLQPNERLMSVFGYADTYVNQIGFTKFVGCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036404Jacalin-like_lectin_dom_sf