Gcaud3005.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3005.t1
Unique NameGcaud3005.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length306
Homology
BLAST of Gcaud3005.t1 vs. uniprot
Match: A0A2V3J156_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J156_9FLOR)

HSP 1 Score: 417 bits (1071), Expect = 3.020e-144
Identity = 200/288 (69.44%), Postives = 249/288 (86.46%), Query Frame = 0
Query:   11 TFVPNPLPSKSHRQTGRIRGNRFICIASISRRQFLSVSVGTVATLFAPCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGLSSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGKAIIQPQAIVLSKP 298
            +F+ NPLP+    +T   R ++  C AS+SRR FLS SV   A L  P +S A+SGLHIFPL +SLTN Y+LMRACET SDA++++NSNP  KLSLE+HSLT +GV+QA+R SEAL KEGLSSDAW+WPSVTIS+F+TAEI+AS+LRIRRE+IVPE+SFLDARGVGAL+GGT S+VRRI+++ND  DS+WRP++G+DGTPNDS+ DVFVRVTQLLNKLETQY+GENI+I+SPDSDPLSILQAT+TGQDL +HHQLEY PGEVRRV+ELVTD YGK ++QP+A+++ +P
Sbjct:   11 SFICNPLPTSQPIRTPT-RLSKVKCSASVSRRHFLSASVAATAALLMPSKSEAISGLHIFPLKDSLTNAYFLMRACETNSDASKIVNSNPAYKLSLEQHSLTRKGVDQAIRVSEALQKEGLSSDAWLWPSVTISSFQTAEILASKLRIRREQIVPEYSFLDARGVGALNGGTTSEVRRIVIDNDRTDSDWRPRSGEDGTPNDSTNDVFVRVTQLLNKLETQYYGENIVIISPDSDPLSILQATLTGQDLRSHHQLEYFPGEVRRVKELVTDDYGKTVVQPEALIICRP 297          
BLAST of Gcaud3005.t1 vs. uniprot
Match: R7QBG4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBG4_CHOCR)

HSP 1 Score: 349 bits (895), Expect = 3.030e-117
Identity = 177/296 (59.80%), Postives = 221/296 (74.66%), Query Frame = 0
Query:   11 TFVPNPL------PSKSHRQTGRIRGNRFICIASISRRQFLSVSVGTVATLFAP---CESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGLSSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGKAIIQPQAIVLSK 297
            TFV  P+      P+ SH +  R R    I  +++SRR F  VS+G +A +  P     ++A SGL +FPL E LTN Y+LMRACETVSD   V NSNPV+KLS++ H LT  GV QA+RASEAL+KEG+ S+ WIWPSVT S+FETAEI+A  L +RRE+IVPEFSFLDARGVG ++GG  +DVR +I+ENDG DS+WRP  G+DGTPNDSS DVFVRV QLL+KLETQYFGENI+I+SPDSDPLS+LQ  + GQ+LT HH+ EY PGEVR V+ELV +  G+ I+ P+   +SK
Sbjct:   11 TFVGKPVALPAMRPNISHSRCSRTR----ISASAVSRRDFAKVSLGIIAGVLVPQLPLPAQATSGLRVFPLQEPLTNTYFLMRACETVSDKLGVCNSNPVNKLSIKMHGLTPAGVEQAMRASEALIKEGVGSETWIWPSVTTSSFETAEIMAYNLNVRREQIVPEFSFLDARGVGNMEGGKLADVRGVIIENDGLDSSWRPVPGEDGTPNDSSDDVFVRVRQLLSKLETQYFGENIVILSPDSDPLSVLQTVLMGQELTEHHKHEYQPGEVRFVQELVVNAMGEPIVPPEVKTISK 302          
BLAST of Gcaud3005.t1 vs. uniprot
Match: M1UWD8_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UWD8_CYAM1)

HSP 1 Score: 201 bits (510), Expect = 7.740e-59
Identity = 110/229 (48.03%), Postives = 152/229 (66.38%), Query Frame = 0
Query:   53 ATLFAPCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKE----GLSSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYF--GENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRV 275
            AT+ AP  + AV+GL   PL + L N+YYL+RA E+++DA  ++ SNPVDK S+ K  LT RG  QA  A+E L+K+      +S  WIWPS+T++A+ET EI+  +  +  ERIVPEFS+LD RG+G  +G  +SDV   +   D  D+ +RP AGDDGTP +S  DVF+RV QLL+KLETQY   G +++IV+PD+  LS+L+  M G+ L    Q  + PGEV  V
Sbjct:   82 ATVVAP--ALAVNGLVDHPLTQPLRNKYYLVRAGESIADARGMVESNPVDKTSIAKSGLTARGAQQARAAAEQLVKKLGFCQQTSQCWIWPSMTLNAYETGEIIGDKAALGHERIVPEFSYLDKRGLGVYNGSISSDVIPRLHAQDRADAQYRPPAGDDGTPPESIFDVFIRVRQLLSKLETQYGTQGADVVIVAPDTYTLSVLECVMNGEPLERFEQHLFAPGEVHFV 308          
BLAST of Gcaud3005.t1 vs. uniprot
Match: A0A835D548_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835D548_9MAGN)

HSP 1 Score: 196 bits (497), Expect = 1.980e-57
Identity = 121/280 (43.21%), Postives = 161/280 (57.50%), Query Frame = 0
Query:   13 VPNPLPSKSHRQTGRIRGNRFICIASISRRQFL-SVSVGTVATLFA-----PCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGLSSDA-WIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGK 285
            +P P PS SH    R   N   C  SI+RR  L S+++ T +         P       GL   P    LTN Y+L+RA E+  ++  +IN+NPV K S++   L+  G  Q  RA+ +L   G   D+ WIWPS+T  A++ AEI+AS   + R  IVPE+SFLDARG+GA +G     +  +    D   S+ +P   DDGTPN+S  DVFVRVTQL++ LETQY G+ +IIVSPDSD L+ILQA + G DL  H  L + PGEVR V+      Y K
Sbjct:   10 IPPPYPSLSHPANPR---NLHHCSKSINRRHLLTSLAISTTSFFLESPNILPAPVADARGLFQMPPFR-LTNRYFLVRAGESEFESLGIINTNPVAKTSMDS-GLSGEGKKQTARAALSLKAMGACEDSCWIWPSITQRAYQAAEIIASVNGVNRSHIVPEYSFLDARGLGAYEGKNLDSIAEVYAS-DNISSSIKPPPIDDGTPNESVADVFVRVTQLMSILETQYSGDTVIIVSPDSDNLTILQAGLVGLDLRRHRDLSFGPGEVRFVDASSIPTYKK 283          
BLAST of Gcaud3005.t1 vs. uniprot
Match: UPI000B77F331 (uncharacterized protein LOC110686611 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B77F331)

HSP 1 Score: 194 bits (492), Expect = 1.320e-56
Identity = 117/256 (45.70%), Postives = 152/256 (59.38%), Query Frame = 0
Query:   31 NRFICIASISRRQFLSVSVGTVATLFAPCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGL-SSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGK 285
            NR   + S+S     S S+ T      P  +    GL   P    L N Y+L+RA E+  ++  VIN+NPV K S++   L+  G  Q VRAS  L K G      WIWPS+T  A++TAE++AS  +I R  IVPE+SFLDARG+GA +G     V  +    DG   N +P   DDGTPN+S +DVFVRVTQL++ LETQY G+ +IIVSPDSD L++LQA + G DL  H  L + PGEVR V+E     Y K
Sbjct:   37 NRRHLLTSLSLSITPSFSLLTSQFPILPPPAADARGLFQMPPFR-LNNRYFLVRAGESQYESLGVINTNPVAKTSVDS-GLSENGKRQTVRASLELKKMGACDGSCWIWPSITQRAYQTAEVIASVNKIDRSHIVPEYSFLDARGLGAYEGKALESVTEVYAS-DGLSPNIKPPPIDDGTPNESVEDVFVRVTQLMSILETQYSGDTVIIVSPDSDNLTVLQAGLVGLDLRRHRDLSFSPGEVRFVDEKSIPEYKK 289          
BLAST of Gcaud3005.t1 vs. uniprot
Match: G7JPU0_MEDTR (Phosphoglycerate mutase n=4 Tax=IRL clade TaxID=2233839 RepID=G7JPU0_MEDTR)

HSP 1 Score: 193 bits (490), Expect = 2.340e-56
Identity = 108/213 (50.70%), Postives = 146/213 (68.54%), Query Frame = 0
Query:   65 SGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGL-SSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVE 276
            SGL I P    L N+YYL+R+ E+  ++  VIN+NPV K S++ + L+ RG  Q++RA+  L + G   ++ WIWP++T  A++TAEI+AS   I R  IVPE+SFLDARG+GA +G T   V +I    DG  +  +P   DDGTPN+S  DVFVRVTQL++ LETQY G+ ++IVSPDSD LSILQA + G DL  H +L + PGEVR V+
Sbjct:   67 SGLFIMP-PPRLKNQYYLVRSGESEFESMGVINTNPVAKTSMD-NGLSDRGKKQSIRAAFDLKEMGACDNNCWIWPAITQRAYQTAEIIASVNSITRSYIVPEYSFLDARGLGAYEGKTLEYVSKIYAS-DGISTKIKPPPIDDGTPNESVADVFVRVTQLMSILETQYAGDTVVIVSPDSDNLSILQAGLVGLDLRRHRELSFAPGEVRYVD 276          
BLAST of Gcaud3005.t1 vs. uniprot
Match: A0A2P6TT41_CHLSO (Phosphoglycerate mutase family isoform 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT41_CHLSO)

HSP 1 Score: 191 bits (484), Expect = 6.140e-56
Identity = 105/240 (43.75%), Postives = 150/240 (62.50%), Query Frame = 0
Query:   38 SISRRQFLSVSVGTVATLFAPCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKE-GLSSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVE 276
            ++S R  L+++    A +  P    A SG+   P+ + L+N Y+L+RA ++ ++A   + +NPV K S     L+  G  Q V+ +   L++ GL S  WIWPS+T +A++TAE++A+   + R RIVPEFSFLDARGVG L+    S+V   +   D     WRP    DGT ++SS DV VRV QLL+ LETQY G+ ++IVSPDSD LS+LQA + G DL +HH   + PGE RR+E
Sbjct:    3 AVSSRPLLALASCAAAAVALPASPAAASGILQLPI-DKLSNSYFLVRAGQSEAEAAGYVLTNPVAKTSTTA-GLSKNGKRQIVKETYPALRQLGLDSSCWIWPSITQNAYQTAEVLAALHGVGRNRIVPEFSFLDARGVGELERLPLSEVAAALEAGDALAPTWRPAPNVDGTVHESSADVLVRVRQLLSLLETQYNGDTVVIVSPDSDNLSVLQAAVLGVDLRSHHTYAFAPGEARRLE 240          
BLAST of Gcaud3005.t1 vs. uniprot
Match: A0A0K9QSQ9_SPIOL (Uncharacterized protein n=3 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QSQ9_SPIOL)

HSP 1 Score: 192 bits (488), Expect = 9.920e-56
Identity = 113/249 (45.38%), Postives = 149/249 (59.84%), Query Frame = 0
Query:   38 SISRRQFLSVSVGTVATLFAPCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGL-SSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGK 285
            S+S   + S+    +  L  P ++R +  +  F     L N Y+L+RA E+  +   VIN+NPV K S++ + L+  G  Q VRA+  L K G      WIWPS+T  A++ AEI+AS  RI R  IVPE+SFLDARG+GA +G     V  +    DG   N +P   DDGTPN+S  DVFVRVTQL++ LETQY G+ +IIVSPDSD LS+LQA + G DL  H  L + PGEVR V+      Y K
Sbjct:   49 SLSTTTYFSLLSSQIPILPPPVDARGLFQMPPF----RLINRYFLVRAGESQYEGLGVINTNPVAKTSVD-NGLSENGKRQTVRAALELKKMGACEGSCWIWPSITQRAYQAAEIIASVNRIDRSHIVPEYSFLDARGLGAYEGKALESVSEVYAS-DGVSPNIKPPPIDDGTPNESVGDVFVRVTQLMSVLETQYSGDTVIIVSPDSDNLSVLQAGLVGLDLRRHRDLSFSPGEVRYVDASSIPEYKK 291          
BLAST of Gcaud3005.t1 vs. uniprot
Match: A0A803L8N2_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L8N2_CHEQI)

HSP 1 Score: 187 bits (475), Expect = 6.910e-55
Identity = 104/222 (46.85%), Postives = 139/222 (62.61%), Query Frame = 0
Query:   76 LTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRASEALLKEGL-SSDAWIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRI-----------IVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGK 285
            L N Y+L+RA E+  ++  VIN+NPV K S++ + L+  G  Q VRA+  L K G      WIWPS+T  A++ AE++AS  +I R  IVPE+SFLDARG+GA +G     V  +           +  +DG   N +P   DDGTPN+S +DVFVRVTQL++ LETQY G+ +IIVSPDSD L++LQA + G DL  H  L + PGEVR V+E     Y K
Sbjct:    6 LNNRYFLVRAGESQYESLGVINTNPVAKTSVD-NGLSENGKRQTVRAALELKKMGACDGSCWIWPSITQRAYQAAEVIASVNKIDRSHIVPEYSFLDARGLGAYEGKALDSVTEVALLFTAEVLKQVYASDGLSPNIKPPPIDDGTPNESVEDVFVRVTQLMSILETQYSGDTVIIVSPDSDNLTVLQAGLVGLDLRRHRDLSFSPGEVRFVDEKSIPEYKK 226          
BLAST of Gcaud3005.t1 vs. uniprot
Match: A0A383VRG4_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRG4_TETOB)

HSP 1 Score: 190 bits (482), Expect = 7.190e-55
Identity = 108/214 (50.47%), Postives = 143/214 (66.82%), Query Frame = 0
Query:   63 AVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNPVDKLSLEKHSLTTRGVNQAVRAS-EALLKEGLSSDA--WIWPSVTISAFETAEIVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNWRPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSILQATMTGQDLTNHHQLEYMPGEVR 273
            A +GL  FP  E L N Y L+RA E+ S+    + +NPV K S     L++RG  Q VR +  A+   G+  +A  WIWPS+T++ ++TAEI+A  L + R RIVPE+SFLDARGVGALDG   +   + ++E D  D+NWRP  G DGTPN+S+ DV  R+ QLL+  ETQY GE+++IV+PDSD LSILQA + G DL  H QL + PGEVR
Sbjct:   88 AAAGLAQFPASE-LKNRYILVRAGESESETQDEMLTNPVWKQS-GMAGLSSRGKVQVVRQTLPAMETLGVCGEAGCWIWPSITLNTYQTAEIMAGSLGVGRSRIVPEYSFLDARGVGALDGLRVATAAQQVLEGDLLDANWRPPKGYDGTPNESAADVLTRMRQLLSICETQYSGEDVVIVAPDSDTLSILQAAVLGVDLRQHRQLGFRPGEVR 299          
The following BLAST results are available for this feature:
BLAST of Gcaud3005.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J156_9FLOR3.020e-14469.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBG4_CHOCR3.030e-11759.80Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1UWD8_CYAM17.740e-5948.03Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A835D548_9MAGN1.980e-5743.21Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
UPI000B77F3311.320e-5645.70uncharacterized protein LOC110686611 n=2 Tax=Cheno... [more]
G7JPU0_MEDTR2.340e-5650.70Phosphoglycerate mutase n=4 Tax=IRL clade TaxID=22... [more]
A0A2P6TT41_CHLSO6.140e-5643.75Phosphoglycerate mutase family isoform 1 n=1 Tax=C... [more]
A0A0K9QSQ9_SPIOL9.920e-5645.38Uncharacterized protein n=3 Tax=Spinacia oleracea ... [more]
A0A803L8N2_CHEQI6.910e-5546.85Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A383VRG4_TETOB7.190e-5550.47Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013078Histidine phosphatase superfamily, clade-1PFAMPF00300His_Phos_1coord: 108..275
e-value: 5.0E-10
score: 39.4
IPR029033Histidine phosphatase superfamilyGENE3D3.40.50.1240coord: 73..282
e-value: 1.8E-14
score: 55.7
IPR029033Histidine phosphatase superfamilySUPERFAMILY53254Phosphoglycerate mutase-likecoord: 80..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..213
NoneNo IPR availablePANTHERPTHR47580PHOSPHOGLYCERATE MUTASE FAMILY PROTEINcoord: 28..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_117_length_47832_cov_4.546323contigNODE_117_length_47832_cov_4.546323:6260..7177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3005.t1Gcaud3005.t1Gracilaria caudata M_176_S67 malemRNANODE_117_length_47832_cov_4.546323 6260..7177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3005.t1 ID=Gcaud3005.t1|Name=Gcaud3005.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=306bp
MALCTDFQSLTFVPNPLPSKSHRQTGRIRGNRFICIASISRRQFLSVSVG
TVATLFAPCESRAVSGLHIFPLHESLTNEYYLMRACETVSDATRVINSNP
VDKLSLEKHSLTTRGVNQAVRASEALLKEGLSSDAWIWPSVTISAFETAE
IVASQLRIRRERIVPEFSFLDARGVGALDGGTASDVRRIIVENDGKDSNW
RPQAGDDGTPNDSSQDVFVRVTQLLNKLETQYFGENIIIVSPDSDPLSIL
QATMTGQDLTNHHQLEYMPGEVRRVEELVTDMYGKAIIQPQAIVLSKPGE
PMRVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013078His_Pase_superF_clade-1
IPR029033His_PPase_superfam