Gcaud2944.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2944.t1
Unique NameGcaud2944.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length177
Homology
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A2V3IHM7_9FLOR (DUF1279 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHM7_9FLOR)

HSP 1 Score: 191 bits (484), Expect = 7.040e-59
Identity = 107/177 (60.45%), Postives = 134/177 (75.71%), Query Frame = 0
Query:    1 MAFIINYTRASQKAHTTVAWANRKFSGLSRTQPLPTRRVRWLVDDRPACTAPRVLTCMSSSNSTKPDAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFF-KKDAESEEASS 176
            +AFI +   A + +    ++    +  L+R +    +RVR  +D   +C      T M++SNS +PDAKELAKL+G SYLGTSI +SI+SYAVLY MVA+GVDVRALMNS G+FLA TPLGRPSIIDNISDTASTAA+AY+AHKAMSP+RFPLT AATPVVA+FF KK ++SEE +S
Sbjct:   14 VAFITSGAIALKSSSGISSFTTGSYGRLTRARVPKPKRVRVSLD---SCKPSHTPTRMANSNSKQPDAKELAKLFGFSYLGTSIAMSIVSYAVLYVMVAVGVDVRALMNSLGNFLASTPLGRPSIIDNISDTASTAALAYIAHKAMSPIRFPLTAAATPVVASFFSKKGSDSEEKTS 187          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A7S0BNR7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNR7_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 9.870e-34
Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 0
Query:   55 LTCMSSSNSTKPD-AKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFFKK-DAESEEAS 175
            + C +    +K D A EL K+YGGSYL TSI  SIIS A  Y  +  G DV A++NSFGD+LA TPLGRP++++ ++ +  T A+AY+AHKA SP RFP+ VAA P VA FFKK DAE + +S
Sbjct:   28 VVCAAEGGKSKTDKATELMKVYGGSYLATSISTSIISLATFYFAIEAGFDVPAMVNSFGDWLATTPLGRPAVLEQVNPSMGTFALAYIAHKATSPARFPVVVAAVPYVAKFFKKSDAEKDPSS 150          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A7S3ENV3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENV3_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 5.270e-33
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 0
Query:   36 TRRVRWLVDDRPACTAPRVLTCMSSSNSTKPD-AKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFF 165
            +RR R LV+ R A     V+ C +    +K D A EL K+YGGSYL TSI  S++S A  Y  +  G DV +L+NSFGD+LA TPLGRP++++ ++ +  T A+AY+AHKA SP RFPL VAA P VA FF
Sbjct:   14 SRRGRCLVNGRRA-----VVLCAAEDGKSKTDKAAELMKVYGGSYLATSISTSVVSMAAFYFAIEAGFDVPSLINSFGDWLATTPLGRPAVLEQVNPSMGTFALAYIAHKATSPARFPLVVAAVPYVAKFF 139          
BLAST of Gcaud2944.t1 vs. uniprot
Match: M1VC15_CYAM1 (DUF1279 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VC15_CYAM1)

HSP 1 Score: 122 bits (305), Expect = 2.160e-31
Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 0
Query:   63 STKPDAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFFKKDAE 170
            ++K  AKEL  LYG  YLGTSI  + +S+   Y +V+ GVDVR  + S GD LA TPLGRP+++D +S    T A+AY+AHKA SPLRFPLTVAA P VA  FKK +E
Sbjct:  114 TSKEIAKELLTLYGPVYLGTSISFAAVSFTFFYVLVSTGVDVRQFVESIGDLLAKTPLGRPAVLDQLSPQVGTVALAYIAHKATSPLRFPLTVAAVPFVAKLFKKRSE 221          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A7J7IM30_9RHOD (DUF1279 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM30_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 6.830e-29
Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:   68 AKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFFKK 167
            AKEL  LYG  YLGTSI  + IS+A  Y +V+ GVDVR  +  FG++L  TP+GRP+++D +S      A+AY+AHKA SPLRFPLTVAA P VA   KK
Sbjct:    2 AKELLTLYGPVYLGTSISFAAISFAFFYVLVSSGVDVRHFVEVFGEWLEKTPIGRPAVLDQLSPQIGAVALAYIAHKATSPLRFPLTVAAVPFVAKLLKK 101          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A5J4YV55_PORPP (DUF1279 domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YV55_PORPP)

HSP 1 Score: 102 bits (253), Expect = 1.010e-23
Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 0
Query:   61 SNSTKPDAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFFKK 167
            + S    AK+LA  YG ++  TS G S+IS +  Y +V  GVDV A M + GD+L  TP+GRP++ D IS   S  A+AY+AHKA SPLRFPL VAA P VA    K
Sbjct:  103 NRSKAEQAKQLAMTYGPAFFLTSAGSSVISISAWYLIVRSGVDVAATMEAIGDYLGTTPIGRPAVFDRISPEMSAFALAYIAHKASSPLRFPLVVAALPFVAKLIGK 209          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A7S0HWF3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HWF3_9CRYP)

HSP 1 Score: 92.0 bits (227), Expect = 4.090e-20
Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   54 VLTCMSSSNSTKPDAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANF-FKKDAESEE 173
            + T +++ N   PDAK+L   YG +YL TSI LS++S+A+ Y +V  GVDV AL++  G              D  ++TA T AIAY AHKA SP+RFP TVA TP+ A + F K  E  +
Sbjct:   78 LFTALTNKNKEGPDAKQLLAKYGSAYLLTSISLSLVSFAICYVLVDHGVDVAALLSKVG-----------IAADGKTETAGTVAIAYAAHKAASPIRFPPTVALTPLTAKYLFNKKVEDSQ 187          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A061R5E1_9CHLO (Protein fam210b-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5E1_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 4.590e-20
Identity = 59/125 (47.20%), Postives = 72/125 (57.60%), Query Frame = 0
Query:   53 RVLTCMSSSNSTKP-DAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFFKKDAESEEASS 176
            +V T  SS ++ K  DAKEL K YG +YL TSI  +I+SYA+ Y +V  GVDV AL+   G   + T           S+   TAAIAY AHKA SP+RFP TVA TPVVA    K  +  E  S
Sbjct:   81 KVFTDKSSDSAKKATDAKELLKRYGSAYLITSISFAIVSYAICYVLVDQGVDVAALLGKVGISTSAT-----------SEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLLGKKVDEGEGDS 194          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A7S1SLD8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLD8_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 7.920e-20
Identity = 57/122 (46.72%), Postives = 72/122 (59.02%), Query Frame = 0
Query:   53 RVLTCMSSSNSTKP-DAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFFKKDAESEE 173
            + LT  S    TK  DAK L K YG +YL TS+  +I+SYA+ Y +V  GVDV +L++  G   + T           S+   TAAIAY AHKA SP+RFP TVA TPVVA    K+A+ EE
Sbjct:   76 KALTDRSKDKVTKAADAKTLLKQYGSAYLITSVSFAIVSYAICYFLVDQGVDVASLLSKVGITTSST-----------SEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLIGKEAKEEE 186          
BLAST of Gcaud2944.t1 vs. uniprot
Match: A0A6P5GU48_ANACO (uncharacterized protein LOC109726280 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GU48_ANACO)

HSP 1 Score: 90.5 bits (223), Expect = 1.720e-19
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   68 AKELAKLYGGSYLGTSIGLSIISYAVLYAMVAIGVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLRFPLTVAATPVVANFF-KKDAESEE 173
            AKEL   YGG+YL TSI LS+IS+A+ Y +++ G+DV+AL+N  G            + D       T A+AY AHKA SP+RFP TVA TP+VA++  KK A+SEE
Sbjct:   97 AKELLAKYGGAYLATSITLSLISFALCYILISAGIDVQALLNKVG-----------IVTDETGGKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKRAKSEE 192          
The following BLAST results are available for this feature:
BLAST of Gcaud2944.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHM7_9FLOR7.040e-5960.45DUF1279 domain-containing protein n=1 Tax=Gracilar... [more]
A0A7S0BNR7_9RHOD9.870e-3453.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3ENV3_9RHOD5.270e-3351.15Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
M1VC15_CYAM12.160e-3156.48DUF1279 domain-containing protein n=1 Tax=Cyanidio... [more]
A0A7J7IM30_9RHOD6.830e-2956.00DUF1279 domain-containing protein n=1 Tax=Cyanidio... [more]
A0A5J4YV55_PORPP1.010e-2350.47DUF1279 domain-containing protein n=1 Tax=Porphyri... [more]
A0A7S0HWF3_9CRYP4.090e-2043.80Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A061R5E1_9CHLO4.590e-2047.20Protein fam210b-like n=1 Tax=Tetraselmis sp. GSL01... [more]
A0A7S1SLD8_9CHLO7.920e-2046.72Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A6P5GU48_ANACO1.720e-1948.60uncharacterized protein LOC109726280 n=3 Tax=Anana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009688Protein FAM210A/B-like domainPFAMPF06916DUF1279coord: 68..160
e-value: 4.2E-16
score: 59.3
IPR045866Protein FAM210A/B-likePANTHERPTHR21377UNCHARACTERIZEDcoord: 60..171
NoneNo IPR availablePANTHERPTHR21377:SF17OJ991214_12.13 PROTEINcoord: 60..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..102
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_816_length_17601_cov_4.570017contigNODE_816_length_17601_cov_4.570017:4748..5278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2944.t1Gcaud2944.t1Gracilaria caudata M_176_S67 malemRNANODE_816_length_17601_cov_4.570017 4748..5278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2944.t1 ID=Gcaud2944.t1|Name=Gcaud2944.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=177bp
MAFIINYTRASQKAHTTVAWANRKFSGLSRTQPLPTRRVRWLVDDRPACT
APRVLTCMSSSNSTKPDAKELAKLYGGSYLGTSIGLSIISYAVLYAMVAI
GVDVRALMNSFGDFLAMTPLGRPSIIDNISDTASTAAIAYVAHKAMSPLR
FPLTVAATPVVANFFKKDAESEEASS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009688FAM210A/B-like_dom
IPR045866FAM210A/B-like